Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027503_T044
CDS Infomation

cds chromosome:B73_RefGen_v4:1:6834707:6840490:-1 gene:Zm00001d027503 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-binding EF hand family protein
Sequence

ATGGCGGCGGGAACGGAGGCCTTTGAGGCATACTTCCGCCGCGCGGATTTGGACCAGGAC
GGCCGCATCAGCGGCCAGGAAGCTGTCGCCTTCTTCCAGGGCGCCAACCTGCCGCAGCCA
GTCCTCGCCCAGGTATGGATGCACGCCGATCAGAACAAGACTGGTTTCCTCGGCCGCCCG
GAATTCTTCAACGCGCTGCGCCTGGTCACCGTAGCGCAGAGCGGGCGTCAGCTCACGCCC
GACATAGTGCAGTCGGCACTGTATGGTCCCGCCGCGGCTCGAATTCCAGCTCCCAAGATA
GCCGCGGGGGCGGCTCGTTCACAGATGGGTGCTGCGGGGGCGCCTAGGCCTCAGGGGAGC
GCTGCGATGACGCCCGGGCAGGTTGGAGCAGCTCAGATGAATCCGGCTGGCACACCAAGG
CCCCAGGGAAGCGGTATGATGCCGACATCTACCCAAGTTAGTATGCTGCAGGTGAACCCT
GGTGCTGCTCCAAGGCCCCAAGGGATCAGTTCTATGATGCCAGCTGCGAGTCAGGGTGGT
GCTCTACAAGCAACTCAATTTGCTGCACCAAGGGCAATGCAGCCACAGCCTCCTAACCTG
GGAATTACTCAACAGCAACCTTCTAGTACCGGTTTCATGCGGCCACCACAGGTTGGAACT
CCAGCAGCTTCATTTCAAGCTCAAGCGCCTGGAATCAATCAAGGTTTGGTCCATGGAGGC
AGCATGGAAGGATCTATCAGTTGGCAAGGCGGTAATGCTGCCTCAGTTGGAGGCATCCCA
CGAGCTATACCAGGAGCTGCTCCTTCTCAGACAACACGTGGATTTGGTCCAGGTTTACCT
AGCACAATGGGCATGGTGCCTGGACAACAGGTACAAGCAATGTCTTCATCGCCATTGCCT
CCACAGAGCAACAGTGCTGTTTTGCCTCAGAATTCAAAAGCTTTGGTACTGTCTGGAAAT
GGCCCTGCCAGCAGCTCTGGATCAAGCACAGACATCTTCTCTGCACTTACACAGCCAAAG
CCAAGCTTATCTGCACCTCAGACAAGCTCGATTCCGAGTTCATCCAGTTTTATGGCCACG
CCTACTGGCTCCCAGAACCTGACTAATCTCACTCAGTTTGGTTCTTTGCAAGGTAGCAGC
CAACCTCAACAGACTCAGCCTATCGTAAAGTCCATTCCTGCTCCAGCTACACCTGTTGTC
TCTGCTGGGATTTCTAATTCAGCTTCTCAATGGCCCAAAATTACTCAACCGGACATCCAG
AAGTACATGAAAGTCTTTGGGGATGTTGATAGGGACAGAGATGGCAAAATAACTGGTGCA
GAAGCTCGCACTCTGTTCCTCAGTTGGAGGCTTCCAAGGGAGGTCCTGAAGCAAGTGTGG
GATTTGTCTGACCAAGACAATGATGGCATGCTTTCTTTGAGAGAGTTTTGCATCGCTCTT
TATTTAATGGAGAGGCACCGAGCTGGAATTCCTCTTCCCCCAGCCCTTCCTGACTCTCTT
AGGCATGATGAGACACTGTTACGAGCTACAGGCTTGCCTTCAACAGCATACAATAGTCCA
TCATGGCAACACAATCAAGGAGGATTACCACAAAGAGGCCCTGGAGCACCTGGGGTGCCT
GCTGGTGGTGTGCGGCCACCCTTGCCATCACATTTGCATTCACAAACTGATGGAGCTAGC
AGACAAGGGCAACCAAGATCTCACATGCCTGGGATGGATAATCATGTGGTAATTCAAGGA
AACAAAGATGACAAAAGTGCGCTGAACCAGGCTGCACAGGAGGTGGTGGATGCTCCTAAG
AAGGTTGAGGTGGAGAAGCAGGTCCTGGATTCCAGAGAGAAATTGGAGTATTACCGCACA
AAGATGCAAGATCTTGTCCTGTATAAAAGTCGGTGCGAGAATAGGCTGAATGAGATTACA
GAAAGGGCGTCCTCTGATAAACGCGAGGTACAGAATACTGCTTATAACGTTATGTATACT
ATCATTTTAGGTGGCTAG

Peptide Sequence

PEP ID

Zm00001d027503_P044
PEP Infomation

pep chromosome:B73_RefGen_v4:1:6834707:6840490:-1 gene:Zm00001d027503 transcript:Zm00001d027503_T044 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-binding EF hand family protein
Sequence

MAAGTEAFEAYFRRADLDQDGRISGQEAVAFFQGANLPQPVLAQVWMHADQNKTGFLGRP
EFFNALRLVTVAQSGRQLTPDIVQSALYGPAAARIPAPKIAAGAARSQMGAAGAPRPQGS
AAMTPGQVGAAQMNPAGTPRPQGSGMMPTSTQVSMLQVNPGAAPRPQGISSMMPAASQGG
ALQATQFAAPRAMQPQPPNLGITQQQPSSTGFMRPPQVGTPAASFQAQAPGINQGLVHGG
SMEGSISWQGGNAASVGGIPRAIPGAAPSQTTRGFGPGLPSTMGMVPGQQVQAMSSSPLP
PQSNSAVLPQNSKALVLSGNGPASSSGSSTDIFSALTQPKPSLSAPQTSSIPSSSSFMAT
PTGSQNLTNLTQFGSLQGSSQPQQTQPIVKSIPAPATPVVSAGISNSASQWPKITQPDIQ
KYMKVFGDVDRDRDGKITGAEARTLFLSWRLPREVLKQVWDLSDQDNDGMLSLREFCIAL
YLMERHRAGIPLPPALPDSLRHDETLLRATGLPSTAYNSPSWQHNQGGLPQRGPGAPGVP
AGGVRPPLPSHLHSQTDGASRQGQPRSHMPGMDNHVVIQGNKDDKSALNQAAQEVVDAPK
KVEVEKQVLDSREKLEYYRTKMQDLVLYKSRCENRLNEITERASSDKREVQNTAYNVMYT
IILGG

Transcript Sequence

Transcript ID

Zm00001d027503_T044
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:6834707:6840490:-1 gene:Zm00001d027503 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-binding EF hand family protein
Sequence

GCAGCCCCGCCGCGACACGCTCCCCCGAGATCTCCAGCGCCCGACTTGGCAGATCCAGCA
AGCTGCACCCACCGCAGGCGTGATCTCCTCTCTTGGATCCCGAAGATGGCGGCGGGAACG
GAGGCCTTTGAGGCATACTTCCGCCGCGCGGATTTGGACCAGGACGGCCGCATCAGCGGC
CAGGAAGCTGTCGCCTTCTTCCAGGGCGCCAACCTGCCGCAGCCAGTCCTCGCCCAGGTA
TGGATGCACGCCGATCAGAACAAGACTGGTTTCCTCGGCCGCCCGGAATTCTTCAACGCG
CTGCGCCTGGTCACCGTAGCGCAGAGCGGGCGTCAGCTCACGCCCGACATAGTGCAGTCG
GCACTGTATGGTCCCGCCGCGGCTCGAATTCCAGCTCCCAAGATAGCCGCGGGGGCGGCT
CGTTCACAGATGGGTGCTGCGGGGGCGCCTAGGCCTCAGGGGAGCGCTGCGATGACGCCC
GGGCAGGTTGGAGCAGCTCAGATGAATCCGGCTGGCACACCAAGGCCCCAGGGAAGCGGT
ATGATGCCGACATCTACCCAAGTTAGTATGCTGCAGGTGAACCCTGGTGCTGCTCCAAGG
CCCCAAGGGATCAGTTCTATGATGCCAGCTGCGAGTCAGGGTGGTGCTCTACAAGCAACT
CAATTTGCTGCACCAAGGGCAATGCAGCCACAGCCTCCTAACCTGGGAATTACTCAACAG
CAACCTTCTAGTACCGGTTTCATGCGGCCACCACAGGTTGGAACTCCAGCAGCTTCATTT
CAAGCTCAAGCGCCTGGAATCAATCAAGGTTTGGTCCATGGAGGCAGCATGGAAGGATCT
ATCAGTTGGCAAGGCGGTAATGCTGCCTCAGTTGGAGGCATCCCACGAGCTATACCAGGA
GCTGCTCCTTCTCAGACAACACGTGGATTTGGTCCAGGTTTACCTAGCACAATGGGCATG
GTGCCTGGACAACAGGTACAAGCAATGTCTTCATCGCCATTGCCTCCACAGAGCAACAGT
GCTGTTTTGCCTCAGAATTCAAAAGCTTTGGTACTGTCTGGAAATGGCCCTGCCAGCAGC
TCTGGATCAAGCACAGACATCTTCTCTGCACTTACACAGCCAAAGCCAAGCTTATCTGCA
CCTCAGACAAGCTCGATTCCGAGTTCATCCAGTTTTATGGCCACGCCTACTGGCTCCCAG
AACCTGACTAATCTCACTCAGTTTGGTTCTTTGCAAGGTAGCAGCCAACCTCAACAGACT
CAGCCTATCGTAAAGTCCATTCCTGCTCCAGCTACACCTGTTGTCTCTGCTGGGATTTCT
AATTCAGCTTCTCAATGGCCCAAAATTACTCAACCGGACATCCAGAAGTACATGAAAGTC
TTTGGGGATGTTGATAGGGACAGAGATGGCAAAATAACTGGTGCAGAAGCTCGCACTCTG
TTCCTCAGTTGGAGGCTTCCAAGGGAGGTCCTGAAGCAAGTGTGGGATTTGTCTGACCAA
GACAATGATGGCATGCTTTCTTTGAGAGAGTTTTGCATCGCTCTTTATTTAATGGAGAGG
CACCGAGCTGGAATTCCTCTTCCCCCAGCCCTTCCTGACTCTCTTAGGCATGATGAGACA
CTGTTACGAGCTACAGGCTTGCCTTCAACAGCATACAATAGTCCATCATGGCAACACAAT
CAAGGAGGATTACCACAAAGAGGCCCTGGAGCACCTGGGGTGCCTGCTGGTGGTGTGCGG
CCACCCTTGCCATCACATTTGCATTCACAAACTGATGGAGCTAGCAGACAAGGGCAACCA
AGATCTCACATGCCTGGGATGGATAATCATGTGGTAATTCAAGGAAACAAAGATGACAAA
AGTGCGCTGAACCAGGCTGCACAGGAGGTGGTGGATGCTCCTAAGAAGGTTGAGGTGGAG
AAGCAGGTCCTGGATTCCAGAGAGAAATTGGAGTATTACCGCACAAAGATGCAAGATCTT
GTCCTGTATAAAAGTCGGTGCGAGAATAGGCTGAATGAGATTACAGAAAGGGCGTCCTCT
GATAAACGCGAGGTACAGAATACTGCTTATAACGTTATGTATACTATCATTTTAGGTGGC
TAGTTGTTCCTTTTGATCTGTAGTTTGATGATAAATTCTCAGACACATGCAAATAAAAAG
TACAGAATATTG