Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d027462_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:1:5819847:5824879:-1 gene:Zm00001d027462 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 1 description: FHA-transcription factor 1
Sequence	ATGAACATTCTTTTGAGCGCTGACGAGCACTACCTAGGGCGTGCTGTTGAGGAGCGGTTT CGGGTTTTTGCCCAGCAGATCAGTGGGAAGCATTGCAAGATATACAAGGACACCGTCTCA GGGGAGCGGAACCGCCATGAGCCTGTGCCTGTTTTCTTCAAGGACACAAGCTCAAATGGC ACATTCATCAACTGGAAAAAGTTCAAGAAAAATGCATCCCCGGTCAAGCTTAATCATGGC GACATTATATCATTACCATCACCTCCTCATGACGGCAAATCCTTTGTATTTGTCTACCGG GAAGTTAATGCAATCAGTTGTGTAGAGAATGGGGTTCCCATTCTTAAAAGGAAGTCAGAG GAGGGTAGTTCTGGAAGCAAGAGGCTTAAGGGTCTTGGTATTGGTTCTCCTGATGGTCCT GTTTCACTAGACGATGTCCGAAGACTAGAAAAATCTAATGCTGATCTCAGGGAACAACTT GAGGCTCATGTTGTGACAATTGAAACTTTGAGGGCTGAAATAAAAACGACCCAAGTGCAG CATGGAAAGGAACTTGAGGAGTTGAGAGAAACTACGTCGAGTTCTTATCTTGATCAAACT AAATCTCTCCAGTCCACACTTGAGGAGAAACAGAAGCAAATAGATTCACTCAGTACATCA AATACAGAGTTACAGAACTCTATAAAAGATCTGGATGAAAGGCTTGGTGCATCTAAACAA TCACGCGCGGATGCTGATGAGATAATTTCAAGCCAGAAAGCAATCATCCGTGAGCTTGAG GAACAGCTAAGTGAGGAGCGCAACTTAAGAAGAGAAGAGCGTGATAAGGCTGCACATGAC TTGAAATTTGCAGTGCATAAAGTGCAAGCCGAGGCTCAAGAAGAAATTAAGAAACAAGCA GAGTCTTACCTTAGACAACAAAGAGAACAGAAAGAAGTTATTAACAAGCTTCAGGAATCA GAAAAAGAAACACGTTTGTTTGTGGAAACTTTGAGGTCCAAGTTGGAAGATGCTCGAGAT AATCTTGTAACATCTGAGAAAAAAGTAAGAGAGCTGGAAGCTCAGTTTCAGGACGAGCAG CTAGTATCAGCCAACAATCGAAAGAAATCAGAAAATCTGGAAACTGAATTGAGAAAACTG AAGAAGGAACTTGAGAATGAGAAGCAGGCTGCTCGAGAAGAAGCATGGGCAAAGGTCTCA GCTCTTGAGCTTGAAATAGCTGCAACGATTAGAGATCTATCAATTGAGAAACAGAGGTAT CAAGGGGCTAGAGAACGGATTATTCTACGGGAGACTCAGCTGCGTGCTTTCTATTCAACT ACAGAAGAAATCTCTTCTCTGTTTGCGAAGCAGCAGGAACAGCTGAAAGCTATGCAGAGA ACTTTGGAGGATGAGGAGAACTATGAGAGCACCTTAATGAGTGTGGATCTCAATAAAGAG CATCTAGCCATTGATAATGCTGGTATGAAGCCAGTAAACTGCTCAAAAAATACACTGGGA GCTTCAATTGCTTCACCAGAAAATACTCAGGTAAGTGAACATAGTTCCAGTGACGAAGAT GCCAACATGACTGAGCAGCAAGATGATGATGTTACTGCCAATGGTGGCAACACTCAAGAT CTAGAATGCACCAGTCCAGAAAGGTCAGTGGAGAGGAGGCCGGGTTTTCATGGCAATCCT GTTCCTACAGCTCCTGAGAGGGAAGTAACAGATACTGAGCAAGTTCCTGAGACAGAAAGC GAAGCTGGTAATGTTGGTTGCGATGACCAAAGATGTGACAATATCGGAGGAGAGACTATG CCGCTAGAGGACGAAGTGCTGCTTCCAGAGAACGAGGAGCCTACTGCATTGCTCAAAGAT GCAGGGCAGCCACAATCAAATATGGTTCCTATTCCAATTCTCGATGATGGCGGCGGCCAC TGTTCAGAAGAAAAACACGAGGGTGCTTGCTCTGAGAGCAAACGGGATGACACACATGTT GGAGCTATCAGAACGGGTGATCTGTTGGCCTCAGAAGTTGCTGGCAGCTGGGCAGTGGAA ACAGCTCCATCTGTCAATGGGGAGAACGAATCTCCAAGGAGCTTGGGAGATGCTACAGAG CGAGATGAAGATGGAGGTAGCGTGGCAGCTGATGCTTTGCTAACTTTGGTGAACTCAGAG GGCCAGGCGGCTGGGAGCCAGAATAATGTTGAGCAGGCCAGTTCCAAAATAACCGATGAT CGCCGTGTTCTTAGTGCCATGATTGGGATTGTTGATCCTGAATTCAGGAAGCAAATGTCC AGGAGTGGAGCTGGAAACGAGGAGCCGATGTCTGACGCTGAGACGGATGAAGGCGTCGAG GAAGGTGATTCAGATTCAGGTTCAGATGGCAGCGACAGCGACAGCGAGGAGGCTATGGTT GAGGATTCTGTTGGGTAG

Peptide Sequence

PEP ID	Zm00001d027462_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:1:5819847:5824879:-1 gene:Zm00001d027462 transcript:Zm00001d027462_T007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 1 description: FHA-transcription factor 1
Sequence	MNILLSADEHYLGRAVEERFRVFAQQISGKHCKIYKDTVSGERNRHEPVPVFFKDTSSNG TFINWKKFKKNASPVKLNHGDIISLPSPPHDGKSFVFVYREVNAISCVENGVPILKRKSE EGSSGSKRLKGLGIGSPDGPVSLDDVRRLEKSNADLREQLEAHVVTIETLRAEIKTTQVQ HGKELEELRETTSSSYLDQTKSLQSTLEEKQKQIDSLSTSNTELQNSIKDLDERLGASKQ SRADADEIISSQKAIIRELEEQLSEERNLRREERDKAAHDLKFAVHKVQAEAQEEIKKQA ESYLRQQREQKEVINKLQESEKETRLFVETLRSKLEDARDNLVTSEKKVRELEAQFQDEQ LVSANNRKKSENLETELRKLKKELENEKQAAREEAWAKVSALELEIAATIRDLSIEKQRY QGARERIILRETQLRAFYSTTEEISSLFAKQQEQLKAMQRTLEDEENYESTLMSVDLNKE HLAIDNAGMKPVNCSKNTLGASIASPENTQVSEHSSSDEDANMTEQQDDDVTANGGNTQD LECTSPERSVERRPGFHGNPVPTAPEREVTDTEQVPETESEAGNVGCDDQRCDNIGGETM PLEDEVLLPENEEPTALLKDAGQPQSNMVPIPILDDGGGHCSEEKHEGACSESKRDDTHV GAIRTGDLLASEVAGSWAVETAPSVNGENESPRSLGDATERDEDGGSVAADALLTLVNSE GQAAGSQNNVEQASSKITDDRRVLSAMIGIVDPEFRKQMSRSGAGNEEPMSDAETDEGVE EGDSDSGSDGSDSDSEEAMVEDSVG

Transcript Sequence

Transcript ID	Zm00001d027462_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:5819847:5824879:-1 gene:Zm00001d027462 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 1 description: FHA-transcription factor 1
Sequence	ACGCCGCGCGCCCGGCAGCGGGAGGCGGGGCCCTTCGCGCGCGCGCAATGGCGCCGGACC CGTGCGCCGACCTCGCGGTGACGCCCAAGACGTCGGCCAAGGACGAGGCGTCCTGCTCCG TGGCCCCGCCCACGCCGCCCAAGGTCACCCCCGACGAGGTCCGCGCGGTGGCGCGCAAGT TCGCGGACCAGCCTATCCAGGAGACGGAACCCGACGTCTGGGCCGTCCTCACCGCCATCT CCAAGAAGGCCCGCCTCCGGCCCCAGGGATGAACATTCTTTTGAGCGCTGACGAGCACTA CCTAGGGCGTGCTGTTGAGGAGCGGTTTCGGGTTTTTGCCCAGCAGATCAGTGGGAAGCA TTGCAAGATATACAAGGACACCGTCTCAGGGGAGCGGAACCGCCATGAGCCTGTGCCTGT TTTCTTCAAGGACACAAGCTCAAATGGCACATTCATCAACTGGAAAAAGTTCAAGAAAAA TGCATCCCCGGTCAAGCTTAATCATGGCGACATTATATCATTACCATCACCTCCTCATGA CGGCAAATCCTTTGTATTTGTCTACCGGGAAGTTAATGCAATCAGTTGTGTAGAGAATGG GGTTCCCATTCTTAAAAGGAAGTCAGAGGAGGGTAGTTCTGGAAGCAAGAGGCTTAAGGG TCTTGGTATTGGTTCTCCTGATGGTCCTGTTTCACTAGACGATGTCCGAAGACTAGAAAA ATCTAATGCTGATCTCAGGGAACAACTTGAGGCTCATGTTGTGACAATTGAAACTTTGAG GGCTGAAATAAAAACGACCCAAGTGCAGCATGGAAAGGAACTTGAGGAGTTGAGAGAAAC TACGTCGAGTTCTTATCTTGATCAAACTAAATCTCTCCAGTCCACACTTGAGGAGAAACA GAAGCAAATAGATTCACTCAGTACATCAAATACAGAGTTACAGAACTCTATAAAAGATCT GGATGAAAGGCTTGGTGCATCTAAACAATCACGCGCGGATGCTGATGAGATAATTTCAAG CCAGAAAGCAATCATCCGTGAGCTTGAGGAACAGCTAAGTGAGGAGCGCAACTTAAGAAG AGAAGAGCGTGATAAGGCTGCACATGACTTGAAATTTGCAGTGCATAAAGTGCAAGCCGA GGCTCAAGAAGAAATTAAGAAACAAGCAGAGTCTTACCTTAGACAACAAAGAGAACAGAA AGAAGTTATTAACAAGCTTCAGGAATCAGAAAAAGAAACACGTTTGTTTGTGGAAACTTT GAGGTCCAAGTTGGAAGATGCTCGAGATAATCTTGTAACATCTGAGAAAAAAGTAAGAGA GCTGGAAGCTCAGTTTCAGGACGAGCAGCTAGTATCAGCCAACAATCGAAAGAAATCAGA AAATCTGGAAACTGAATTGAGAAAACTGAAGAAGGAACTTGAGAATGAGAAGCAGGCTGC TCGAGAAGAAGCATGGGCAAAGGTCTCAGCTCTTGAGCTTGAAATAGCTGCAACGATTAG AGATCTATCAATTGAGAAACAGAGGTATCAAGGGGCTAGAGAACGGATTATTCTACGGGA GACTCAGCTGCGTGCTTTCTATTCAACTACAGAAGAAATCTCTTCTCTGTTTGCGAAGCA GCAGGAACAGCTGAAAGCTATGCAGAGAACTTTGGAGGATGAGGAGAACTATGAGAGCAC CTTAATGAGTGTGGATCTCAATAAAGAGCATCTAGCCATTGATAATGCTGGTATGAAGCC AGTAAACTGCTCAAAAAATACACTGGGAGCTTCAATTGCTTCACCAGAAAATACTCAGGT AAGTGAACATAGTTCCAGTGACGAAGATGCCAACATGACTGAGCAGCAAGATGATGATGT TACTGCCAATGGTGGCAACACTCAAGATCTAGAATGCACCAGTCCAGAAAGGTCAGTGGA GAGGAGGCCGGGTTTTCATGGCAATCCTGTTCCTACAGCTCCTGAGAGGGAAGTAACAGA TACTGAGCAAGTTCCTGAGACAGAAAGCGAAGCTGGTAATGTTGGTTGCGATGACCAAAG ATGTGACAATATCGGAGGAGAGACTATGCCGCTAGAGGACGAAGTGCTGCTTCCAGAGAA CGAGGAGCCTACTGCATTGCTCAAAGATGCAGGGCAGCCACAATCAAATATGGTTCCTAT TCCAATTCTCGATGATGGCGGCGGCCACTGTTCAGAAGAAAAACACGAGGGTGCTTGCTC TGAGAGCAAACGGGATGACACACATGTTGGAGCTATCAGAACGGGTGATCTGTTGGCCTC AGAAGTTGCTGGCAGCTGGGCAGTGGAAACAGCTCCATCTGTCAATGGGGAGAACGAATC TCCAAGGAGCTTGGGAGATGCTACAGAGCGAGATGAAGATGGAGGTAGCGTGGCAGCTGA TGCTTTGCTAACTTTGGTGAACTCAGAGGGCCAGGCGGCTGGGAGCCAGAATAATGTTGA GCAGGCCAGTTCCAAAATAACCGATGATCGCCGTGTTCTTAGTGCCATGATTGGGATTGT TGATCCTGAATTCAGGAAGCAAATGTCCAGGAGTGGAGCTGGAAACGAGGAGCCGATGTC TGACGCTGAGACGGATGAAGGCGTCGAGGAAGGTGATTCAGATTCAGGTTCAGATGGCAG CGACAGCGACAGCGAGGAGGCTATGGTTGAGGATTCTGTTGGGTAGCTTAAACGGAATTG ACTGCTCACTGTAAATATCTCAATTCGTTCGTGCACCATTCGCTGTATGAGCTTGTATTA TGCGTAGTGTAGCAGTATTTGTTTTTTATTCTTTAAATGTTTTTAGCAGCTCGTGGTGTT GT