Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d027445_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:1:5481192:5487524:1 gene:Zm00001d027445 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphingoid long-chain bases kinase 2 mitochondrial
Sequence	ATGGCTGCGCCGGCGACGCCGAGGCAGTCGCTGATCCTCCCACGTGCCTCCTCGCACTCG CACTCCCAACCCAGCGCCGGCGGGCTCACCTCTTACCGCGTCACCGCCTCCCACCGCCGG CGCGGCGATTTCGTTTTCGTCGTCAACCCCTTGGGCGCCAATGGCCGCACGGGAAAGCAG TGGAAGCAGTTGCTGCCGCTTCTCCGCACCCGCCTCGCTGACCAGTGCAACATTTGCGAG TGCATCACTTCGGGCCCATCCCATGCCATAGATGTCACAAGGGAGGCTATAAAGGATGGG GTTGATGCCGTGATAGCTGTTGGAGGTGATGGTACACTTCATGAGGTGGTCAATGGTTTC TTTTGGGAAGGAAGTCCAGTGTGTGCTCTGGATCGAGGGCCTGATCATTCGACGGCGCTG GGTCTCATTCCACTTGGAACTGGCTCAGATTTTGCTCGGACATTTGGCTGGACAAATGAT CCCCATGACGCGATTGATCGAATTGTGAGAGGAGTAAAATCAAAACTAGACGTAGGCGTG ATGGAGGGTCCAAACAGAGAACCACACTTCTTTGTTAATGTTGCTGATATCCATTTGAGT GCTAAGGCAGGTTATTTTGCTTCTATGTATAAGAGTTTTGGTAACTTATGCTATGTATTT GGAGCTTTAAGAGCCTTTTGGGGACATAATAATCAAGATATGAGAATAAAGGTAAATGGG GGAGAATGGAGAACTGTTCATAACGTCACAGCCCTGTGCATAGGGAATGCCAAATACTTC GGTGGTGGTATGAAGATAACTCCAACAGCTGATCCGTTTAGTGGCAACCTTGAGGTTGTT ATTCTTCAAGATTTCAAATGGTACGACTTTATTCTGAAGCTACACAGGCTCTATGGAGGT ACACATCTATCAGTGAATGGTGTTTCGTCAATGAGGTAA

Peptide Sequence

PEP ID	Zm00001d027445_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:1:5481192:5487524:1 gene:Zm00001d027445 transcript:Zm00001d027445_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphingoid long-chain bases kinase 2 mitochondrial
Sequence	MAAPATPRQSLILPRASSHSHSQPSAGGLTSYRVTASHRRRGDFVFVVNPLGANGRTGKQ WKQLLPLLRTRLADQCNICECITSGPSHAIDVTREAIKDGVDAVIAVGGDGTLHEVVNGF FWEGSPVCALDRGPDHSTALGLIPLGTGSDFARTFGWTNDPHDAIDRIVRGVKSKLDVGV MEGPNREPHFFVNVADIHLSAKAGYFASMYKSFGNLCYVFGALRAFWGHNNQDMRIKVNG GEWRTVHNVTALCIGNAKYFGGGMKITPTADPFSGNLEVVILQDFKWYDFILKLHRLYGG THLSVNGVSSMR

Transcript Sequence

Transcript ID	Zm00001d027445_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:5481192:5487524:1 gene:Zm00001d027445 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphingoid long-chain bases kinase 2 mitochondrial
Sequence	ATAATAAGCGGCAGGACACCGTCATGGCTGCGCCGGCGACGCCGAGGCAGTCGCTGATCC TCCCACGTGCCTCCTCGCACTCGCACTCCCAACCCAGCGCCGGCGGGCTCACCTCTTACC GCGTCACCGCCTCCCACCGCCGGCGCGGCGATTTCGTTTTCGTCGTCAACCCCTTGGGCG CCAATGGCCGCACGGGAAAGCAGTGGAAGCAGTTGCTGCCGCTTCTCCGCACCCGCCTCG CTGACCAGTGCAACATTTGCGAGTGCATCACTTCGGGCCCATCCCATGCCATAGATGTCA CAAGGGAGGCTATAAAGGATGGGGTTGATGCCGTGATAGCTGTTGGAGGTGATGGTACAC TTCATGAGGTGGTCAATGGTTTCTTTTGGGAAGGAAGTCCAGTGTGTGCTCTGGATCGAG GGCCTGATCATTCGACGGCGCTGGGTCTCATTCCACTTGGAACTGGCTCAGATTTTGCTC GGACATTTGGCTGGACAAATGATCCCCATGACGCGATTGATCGAATTGTGAGAGGAGTAA AATCAAAACTAGACGTAGGCGTGATGGAGGGTCCAAACAGAGAACCACACTTCTTTGTTA ATGTTGCTGATATCCATTTGAGTGCTAAGGCAGGTTATTTTGCTTCTATGTATAAGAGTT TTGGTAACTTATGCTATGTATTTGGAGCTTTAAGAGCCTTTTGGGGACATAATAATCAAG ATATGAGAATAAAGGTAAATGGGGGAGAATGGAGAACTGTTCATAACGTCACAGCCCTGT GCATAGGGAATGCCAAATACTTCGGTGGTGGTATGAAGATAACTCCAACAGCTGATCCGT TTAGTGGCAACCTTGAGGTTGTTATTCTTCAAGATTTCAAATGGTACGACTTTATTCTGA AGCTACACAGGCTCTATGGAGGTACACATCTATCAGTGAATGGTGTTTCGTCAATGAGGT AAACAACTAAACATAGACCTTGAATATCATCATGAAGGTTCTTTTCTTTGATAAAGGAGA CAAGAAAACTTGACCTACGTCTGGGCATTGTATTAAGTACACCTTCTCACACAGGTTGAG AAAAACCCTGAACCCCTACTCCACCTATACAAAGCGACACCTAGCCCATGTGAGAACGAC CACGATGGGGCCCGGGCCTTAGACTCACGCTTTGGTGTGGGACAGATGAGGAGACCTTTT TAATCCTGGCTTGAAATTTGCTCCCATGAGGTGTCGAACTTAGGACCTGAGGAGTGCTAG ACCACCTTGCCCTGTGAGATCAAAGAGTTCTTTGGCACTTATTTGGGGATTCCTCTCTCT ATTCGGAAGCCTACCAACTCAGAGCTGGTACCCTTGATCGATAAAGTGTCAAATAAACTC CTGGATGGAAGGCTACTCTCTTGAACCGTGCTGGCCGCCACGTGTTGGTCAAGGTGGTAC TCTCTTCCATTCCTATATACTCTATGCTGTCTCTTGACCTCCTTAAATGGGTCCTTAAGG CGATTGACAAGCGAAGGAGGGGGTTCCTTTGGAAGGGGCAGAATAATGCAAATGGGGGCA GCTGCCCTTTTGCCTGGGAGGCTGTAGCCCGTCCTATTCAGTTTGGTGGACTGGGCATTC CTAACCTGGAGCGGTTCGGGTGGACCTTGCGTGCCGCTGGCTTTGGATGCAAAAGACCGA TCCTTCCCGCCCTTGGGCTGGTCTGTCAGTCCAGGTGCCTCACGCTGTAAGAGCATTATT CGACATAGCTGTGGTGACCAAGGTGGGTAATGGAGAAACTACCAAGTTCTGGACTGACCG TTGGTTAGAGTATGACTATCGCTGAATGGTGCCCCACTCTGATCAAGTTGATTCCCAAAA GAGCTATGAAGCACAGGACATTAGCGCAAGGGTTGATAAATCGCAGTTGGGTGGAGGATA TTACAGGGGCCCTGTCAGTGCAAGTTCTGGTCGAATATTTGCAACTTTGAGATCTTGTGG ATGGGCTGGAACTCCAAGCCAACACTCCAGATCAGCATATTTGGCGTCTTAACAGCCAGG GCACCTATTCCAGCAAGTCAGCGTATGAAGCTCTCTTCTTCGGGTCGATCAAATTCGCCC CTTGGAAGTGTATTTGGAGGTCATGGACCCCTCTAAAATGCAAAATTTTTATTTGGCTGG CTGTCAAGAACCGGTGTTGGACAACTGACAGGTTAGTCAAGAAAGGTCTACCTCACCCAC CAACCTGCCCCTTTGTGGCCAAGCAGACGAGAGTATCCAGCACATCTTGACCTCCTGTGT CTTTGCTCATGAAGTATGGACTTCAACTTTTAACAGATTTGGGCTCCTCCCTTTGGCCCC GCAGCTGGACTGCTCTCGGTTTTCTAACTGGTGGTGCTGGGCCATAAGGGTGTCGATAAA GTTGAAGAAAGGCCTTAATTCCCTGATCATTCTAGTAGCTTGGGAGCTTTGGAAGCATCG CAATCTGTGCATTTTTAGGGCGCTAGTCCCTGCACCGAAAGGTTGTGCAGGCTGTGTCCT CCGAGTGTGTGTTGTGGTGCTCGGCTGGAGCTGCTGCTTCGCCAGCATTGCCTAGGGTCT TAGTTCCTAGGTCCTAGGTGGCTTTGCTTCGTTGAAAAGGAGACATAACGAGCATACGAA GAACTAAATGATCCAGTATCTTCTTGAAGAAGCAATATGATATCTGAAGTGCCACTTTAT GTCTTCAGTTAAGGTAAATAAATTAGAGACACACTGAGTGGTAGTTCAGGTAGCATATTG CTTTTTTATGTTATGAAAGAAGGTAGTGGAATAGTTTTCTTGAAGAGGTCCCAATTACAA AGTCACAAAACTGGAAGTTCTGATTATGGTGTTCTTGAAATGCTAAGAGTCAAGGAGTAC AACGCCTTCTGGCTTCATGCACTACTGTCCTCTAGTGGTCTGAAACTTTATACCTAAGTT TATGTGACATATACTGTGACCGATAGGTCAGATCGTCCGATGAAATTCATAGCACAATGA AAATACAAATCTGTTAACAGTAAAACTACCTAGAGTAATCTGCTGTAGGTCCAAATCGTT AAGGGCCCATTTGTTTCCCTTCATTTTAAGGAATTGGAATTTAACTAATGCAATAAGCTA TTTTTTTAGAATGTGACATTCCACAACTTTCCAAAGTGTATATATAAGCTTATCTCAAAT TCATGGGAGCGAGAGATGGAAATTAATTCTATAGATTTACATGTTACTTTTCTAATGTAC AATTTATAGCACATTCTTCTACTTGTTTCTATATAACATAAATGTAGTGTATAACTATCT ATCTAATATGATTTAGGATAACATACAAATACATTACATAAATAAATATATTAACTCAAT TAGTTTTATCTAAATTATAATTATTAGAATAGAATTCAATTCCAACGAAACAAACGGGGT CTAAGGGAATTGCAAGCTCATTTGCTTTCCTTTGTAATTGGGTTCTTAGAACTTCGAAGC TGTTCAAAATAAAGACCAGCTCCAGCACAAGTGGGCTGTTCTATTTATTCTTTATTTGCA ACCAGTCCATCTTCATCCAAGCGATAGCATTGCTTTTGCAGGGTCCAATCAATTGAAGTA GCAGAGGTGGCGGCTAGCGGTGGCGTCTTTGTGCAATCTGACGGAGAGCATTTCGGCTTT CTGCCGACCAAGTTTTCAGTCCTTCCCCGTGCAGTTGATTTCTTCTGCTAGATCAGCAAG TGGGCTGCATTCATCCCCTGCGCATGAGACAAGTTCTGCCGTGCTGTAGCACTCCGCCAT GTAACTATAATTTAGCCCTGTCATATCGAATGTTTGAACCTCCATTCCGGGTATTAAATG TAGTCGAATTATAAAACTAATTTCTCAGCCGAAGATTAAAAGACGAGACAAATCTAGTCC AGTTGGTTGGGT