Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d027441_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:1:5431343:5434466:1 gene:Zm00001d027441 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	ATGAAGCATTGGCCCCTCATAGCTCCCCTGCCGTCCTACGGGAGAGGAAGGGACGAGCCT GGCCCAAGGTACAGCAATTTCATCGGAGGATCCAATCTCACTGACGTCATCATCACGGGC AAAAATGGAACGATCAACGGGCAGGGGCAGGTCTGGTGGGACAAGTTCCACGCCAAGGAG CTCAAGTTCACCCGCGGCCACCTCCTCGAGCTCCTCTACTCTGACAACATCATCATCTCC AATGTCACCTTCGTCGACGCGCCGTACTGGAACCTCCACCCTACCTATTGCACCAATGTG ACCATCAGTGGCGTCACCATTCTCGCGCCGGTGAATTCGCCTAATACCGATGGAATTGAC CCGGATTCTTCCTCGCGTGTCAAGATCGAGGACTGCTACATCGTCTCCGGCGACGACTGC GTGGCCGTGAAGAGCGGGTGGGACGAGTACGGCATCAGGTTCAACATGCCGAGCCAGCAC ATCGTCATCCGGAGGCTGACCTGCGTCTCCCCCACGAGCGCCATGATCGCGCTGGGCAGC GAGATGTCCGGCGGCATCCGCGACGTGCGCGCCGAGGACAGCGTGGCCATCAACACGGAG TCGGCCGTCAGGGTCAAGTCCGGCGCCGGGAGGGGCGGCTTCGTCAGGGACATCTTCGTG CGCGGCCTCAGCCTCCACACCATGAAGTGGGTGTTCTGGATGACCGGCAACTACGGGCAG CACCCCGACAACACGTCCGACCCCAACGCCATGCCCGAGGTCACCGGCATCAACTACAGC GACGTGTTCGCCGAGAACGTGACCATGGCCGGCAGGATGGAGGGCATCCCTAAGGACCCC TACACCGGGATCTGCATATCCAACGTGACCGCCCGCCTCGCGCCGGACGCCAAGGAGCTG CAGTGGAACTGCACCAACGTCAAGGGGGTCACCTCCCACGTCTCGCCCAAGCCGTGCCCG GAGCTCGCCGCGGAGGGCAAGCCGTGCGCCTTCCCGGAGGAAGAGCTCGTCATCGGCCCA CCCGAGCTGCCGAAGTGTAGCTATTGA

Peptide Sequence

PEP ID	Zm00001d027441_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:1:5431343:5434466:1 gene:Zm00001d027441 transcript:Zm00001d027441_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	MKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGKNGTINGQGQVWWDKFHAKE LKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYCTNVTISGVTILAPVNSPNTDGID PDSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIRRLTCVSPTSAMIALGS EMSGGIRDVRAEDSVAINTESAVRVKSGAGRGGFVRDIFVRGLSLHTMKWVFWMTGNYGQ HPDNTSDPNAMPEVTGINYSDVFAENVTMAGRMEGIPKDPYTGICISNVTARLAPDAKEL QWNCTNVKGVTSHVSPKPCPELAAEGKPCAFPEEELVIGPPELPKCSY

Transcript Sequence

Transcript ID	Zm00001d027441_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:5431343:5434466:1 gene:Zm00001d027441 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	CGGCGTCGGGGGAGAAGAGAAGCGCGCGCGATGGCACCGGGAAGATCTCTTCGCCCTGTA ATAATTCCCTCGCCCCCGCGCTGCATCTTCGATGACGGACCAAAATCCGGGACGATGTTT TGGTGGTCAGTCTCGTCAGTCACTGATCAAGCGGCATTCGTACGTGTTGGTTGTTTTTGC AGGCGGGGACGGCGGCGGTTCTGTGGGCGGCGTCGCTGCTGCTGCTGGCGACGTCGTGCG CGCGCGCAGGTGGCGCGTACGCGGGGCCGGGGTGCCGGAAGCACGTGGCGAGGGTCACGG AGTACGGCGCGGTCGGGGACGGGAGGACGCTCAACACGGCGGCGTTCGCCAGGGCTGTGG CGGACCTGGCGCGGCGCGCGCCCGACGGCGGCGCTGCGCTGGTGGTGCCGCCGGGGAAGT GGCTCACGGGGCCCTTCAACCTCACCAGCTGCTTCACGCTCTACCTCGACGAGGGCGCCG AGATCCTCGCGTCCCAGGACATGAAGCATTGGCCCCTCATAGCTCCCCTGCCGTCCTACG GGAGAGGAAGGGACGAGCCTGGCCCAAGGTACAGCAATTTCATCGGAGGATCCAATCTCA CTGACGTCATCATCACGGGCAAAAATGGAACGATCAACGGGCAGGGGCAGGTCTGGTGGG ACAAGTTCCACGCCAAGGAGCTCAAGTTCACCCGCGGCCACCTCCTCGAGCTCCTCTACT CTGACAACATCATCATCTCCAATGTCACCTTCGTCGACGCGCCGTACTGGAACCTCCACC CTACCTATTGCACCAATGTGACCATCAGTGGCGTCACCATTCTCGCGCCGGTGAATTCGC CTAATACCGATGGAATTGACCCGGATTCTTCCTCGCGTGTCAAGATCGAGGACTGCTACA TCGTCTCCGGCGACGACTGCGTGGCCGTGAAGAGCGGGTGGGACGAGTACGGCATCAGGT TCAACATGCCGAGCCAGCACATCGTCATCCGGAGGCTGACCTGCGTCTCCCCCACGAGCG CCATGATCGCGCTGGGCAGCGAGATGTCCGGCGGCATCCGCGACGTGCGCGCCGAGGACA GCGTGGCCATCAACACGGAGTCGGCCGTCAGGGTCAAGTCCGGCGCCGGGAGGGGCGGCT TCGTCAGGGACATCTTCGTGCGCGGCCTCAGCCTCCACACCATGAAGTGGGTGTTCTGGA TGACCGGCAACTACGGGCAGCACCCCGACAACACGTCCGACCCCAACGCCATGCCCGAGG TCACCGGCATCAACTACAGCGACGTGTTCGCCGAGAACGTGACCATGGCCGGCAGGATGG AGGGCATCCCTAAGGACCCCTACACCGGGATCTGCATATCCAACGTGACCGCCCGCCTCG CGCCGGACGCCAAGGAGCTGCAGTGGAACTGCACCAACGTCAAGGGGGTCACCTCCCACG TCTCGCCCAAGCCGTGCCCGGAGCTCGCCGCGGAGGGCAAGCCGTGCGCCTTCCCGGAGG AAGAGCTCGTCATCGGCCCACCCGAGCTGCCGAAGTGTAGCTATTGAGGCCGATTGCCAA AAGAGATCATTGATCATATAGGCTCTTCGGTGATAGTCTAGACAAGCAGTATGAGAAATG CAGCTGAAATACGTTTGCATTACAGTGTCCGTCTCACATTACTGCTTCCTCCGATTACAA TGTCTGGCAGTGGTATAACTTGTGACTACAAATTATGCATCAAGAAGAAATCAGCAAAAC GGACATGATCATT