Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d027435_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:1:5203115:5208577:1 gene:Zm00001d027435 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 30 description: Homeobox-transcription factor 30
Sequence	ATGGCGCACGACCCCAGCCTGGGCTTCGCGGACTACTTCTCGGCGGCGGCGGCGGCGGGC GCCACGGCGATGGACGACGACGTCGGGGCGCCGGAGCTCTATGGCCTGCATGCCGACGAC ATGGAGTTCCTCGGCATGCGTGGCCTGGCCGCCATGCCCCCCGCCGCGGCACACCACCAG CACCACCACCATCACGGCCACAGCAAGGCCGGTGCGCTCCTCGACGACGACGACGCGGGG GTGGGGCCAGACGTCAGCGGCTCCGCGGACGACGCCACCATGCGCTTCCTGAGCGAGCAG CAGCAGCAGCAGCACCAGGCGCCGCTGTCGCTGTCGCTGTGCCGGCCGGACGTGGCGACG ACGTTGCACGAGCAGCAGCACCTCGCCGGCGGTGGCTCCTCGTCCCGGTACCATCAGGAG CAGCAGCCGGCGGCGTGGGTGCAGCAGCAGCACGACTACTCGCCGTCGCCGCAGCAGCAC GCGTGGCACCTGCGCAGCTCCAGGTTCCTCGTCCCGGCGCAGCAGGTCCTGCAGGAGTTC TGCAGCCTCCCCGTGGACAGCAGCAGCGCTGCCGCCTCCAGCAAGCGCGCCAAGGCCGCA AATAAGCCGGCCTCGCAGCAGCAGCAGCAGCAAGAAGACGGCGGCGGCGCCGAGGGGTCG TCGTCGTCGGCCTCCTGGGCGCCGTCGCCGCAGATCCAGGCCATGGACGCGCTGGAGCTG CAGCGGCTCAAGGACAAGCTCTACATCATGCTGGAAGAGGTGGACCGGAGATACCGGCGG TACTGCGAGCAGATGCGGGCGCTGGCGGGCGGGTTCGAGGCGGTGGCCGGGGAGCGCGCG GCGGCGGCGTACACGGCGCTGGCGTCGCGCACCATCTCGCGGCACTTCCGGAGCCTCCGG GACGGCGTGGTGGCGCAGCTGCAGGCGGCGCGCAGGGCGCTCGGGGAGAAGGACGTGGCG GTGCCCGGGATGACGCGCGGGGACACGCCCAGGCTCAGGGTGCTCGACCAGTGCATCCGC CAGCACAAGGCGCTCACCCAGGCCGCCGGCATGATGGAGAGCCACCCGTGGCGCCCGCAG CGCGGACTCCCCGAGCGCGCCGTCACCATCCTCCGGGCGTGGCTCTTCGAGCACTTCCTG CACCCGTATCCAAGCGACGTCGACAAGCATATCCTGGCTCGCCAGACGGGCCTCTCACGG AGCCAGGTGTCCAACTGGTTCATCAATGCGCGGGTCAGGCTCTGGAAGCCAATGGTGGAG GAGATGTACGTGGAGGAGATGAAGGCCGAGGGCCAGGACGGCGGGGGCCAGCAGCAGGTA GGCGTCGCCGTCGCCAACAACCCTAACCCTAGCAGCGCCGGCCACGCCTCCGAGGCGGCT GAGGACGATGGGCGCGGGGACAGCGGCGGCGGCGCCGTCGTCGACCGGAAGCCGACGCGG GCGCAGCTCCTGCACGACGCCGGCTCGCTCGCCTCGGTCGTCAACATCGGCGGCGGATCG CGCGCGGGATTCGGCATCATGGACCACCTCGACTTCGACGCCTACGGCGGCCACCATGCC GGCGCCGTGTCCCTCACGCTGGGCCTGCAGCAGCACGACTCCCACGCCGACGGCGGCGCC GGCGGCGTCAACATCGCGTTCGGCGCGCCGCCGCCCGCGCACCACCACGGGTACCTGTTC GCTCCGACGGCGGCGGCGGCAGGCCATCAGATGGGCGGCGGCGTGCACCCGGGACTACAC CACCACGTCCAGTTCAGCGGCGCCGGCGCCGGCATCGACGGCGAGGCGGCGCACGGGCAG GAGCACTACCGGGGCCTGCAGGGCGGCGGCGGGTTCCACCTCCTGCGTGACCTGGCCGGG TGA

Peptide Sequence

PEP ID	Zm00001d027435_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:1:5203115:5208577:1 gene:Zm00001d027435 transcript:Zm00001d027435_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 30 description: Homeobox-transcription factor 30
Sequence	MAHDPSLGFADYFSAAAAAGATAMDDDVGAPELYGLHADDMEFLGMRGLAAMPPAAAHHQ HHHHHGHSKAGALLDDDDAGVGPDVSGSADDATMRFLSEQQQQQHQAPLSLSLCRPDVAT TLHEQQHLAGGGSSSRYHQEQQPAAWVQQQHDYSPSPQQHAWHLRSSRFLVPAQQVLQEF CSLPVDSSSAAASSKRAKAANKPASQQQQQQEDGGGAEGSSSSASWAPSPQIQAMDALEL QRLKDKLYIMLEEVDRRYRRYCEQMRALAGGFEAVAGERAAAAYTALASRTISRHFRSLR DGVVAQLQAARRALGEKDVAVPGMTRGDTPRLRVLDQCIRQHKALTQAAGMMESHPWRPQ RGLPERAVTILRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVE EMYVEEMKAEGQDGGGQQQVGVAVANNPNPSSAGHASEAAEDDGRGDSGGGAVVDRKPTR AQLLHDAGSLASVVNIGGGSRAGFGIMDHLDFDAYGGHHAGAVSLTLGLQQHDSHADGGA GGVNIAFGAPPPAHHHGYLFAPTAAAAGHQMGGGVHPGLHHHVQFSGAGAGIDGEAAHGQ EHYRGLQGGGGFHLLRDLAG

Transcript Sequence

Transcript ID	Zm00001d027435_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:5203115:5208577:1 gene:Zm00001d027435 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 30 description: Homeobox-transcription factor 30
Sequence	TTCCTCCTTTTCCACCCCTGCCCTCCCCCAACACAAAGCGAGATTCTTGCTTGCTTGGCA GAGCCATGTCAGGAAAGATTTATCTGGTCGGCCGATCGAGCTCCTCTCCTCCGAAGCACT GAAGCTCCAGCGGCTGCCCTGCCTGACAGCCACTCCGCACGACAAAATTAAACGCGGGCG ATCAAGATGGCGCACGACCCCAGCCTGGGCTTCGCGGACTACTTCTCGGCGGCGGCGGCG GCGGGCGCCACGGCGATGGACGACGACGTCGGGGCGCCGGAGCTCTATGGCCTGCATGCC GACGACATGGAGTTCCTCGGCATGCGTGGCCTGGCCGCCATGCCCCCCGCCGCGGCACAC CACCAGCACCACCACCATCACGGCCACAGCAAGGCCGGTGCGCTCCTCGACGACGACGAC GCGGGGGTGGGGCCAGACGTCAGCGGCTCCGCGGACGACGCCACCATGCGCTTCCTGAGC GAGCAGCAGCAGCAGCAGCACCAGGCGCCGCTGTCGCTGTCGCTGTGCCGGCCGGACGTG GCGACGACGTTGCACGAGCAGCAGCACCTCGCCGGCGGTGGCTCCTCGTCCCGGTACCAT CAGGAGCAGCAGCCGGCGGCGTGGGTGCAGCAGCAGCACGACTACTCGCCGTCGCCGCAG CAGCACGCGTGGCACCTGCGCAGCTCCAGGTTCCTCGTCCCGGCGCAGCAGGTCCTGCAG GAGTTCTGCAGCCTCCCCGTGGACAGCAGCAGCGCTGCCGCCTCCAGCAAGCGCGCCAAG GCCGCAAATAAGCCGGCCTCGCAGCAGCAGCAGCAGCAAGAAGACGGCGGCGGCGCCGAG GGGTCGTCGTCGTCGGCCTCCTGGGCGCCGTCGCCGCAGATCCAGGCCATGGACGCGCTG GAGCTGCAGCGGCTCAAGGACAAGCTCTACATCATGCTGGAAGAGGTGGACCGGAGATAC CGGCGGTACTGCGAGCAGATGCGGGCGCTGGCGGGCGGGTTCGAGGCGGTGGCCGGGGAG CGCGCGGCGGCGGCGTACACGGCGCTGGCGTCGCGCACCATCTCGCGGCACTTCCGGAGC CTCCGGGACGGCGTGGTGGCGCAGCTGCAGGCGGCGCGCAGGGCGCTCGGGGAGAAGGAC GTGGCGGTGCCCGGGATGACGCGCGGGGACACGCCCAGGCTCAGGGTGCTCGACCAGTGC ATCCGCCAGCACAAGGCGCTCACCCAGGCCGCCGGCATGATGGAGAGCCACCCGTGGCGC CCGCAGCGCGGACTCCCCGAGCGCGCCGTCACCATCCTCCGGGCGTGGCTCTTCGAGCAC TTCCTGCACCCGTATCCAAGCGACGTCGACAAGCATATCCTGGCTCGCCAGACGGGCCTC TCACGGAGCCAGGTGTCCAACTGGTTCATCAATGCGCGGGTCAGGCTCTGGAAGCCAATG GTGGAGGAGATGTACGTGGAGGAGATGAAGGCCGAGGGCCAGGACGGCGGGGGCCAGCAG CAGGTAGGCGTCGCCGTCGCCAACAACCCTAACCCTAGCAGCGCCGGCCACGCCTCCGAG GCGGCTGAGGACGATGGGCGCGGGGACAGCGGCGGCGGCGCCGTCGTCGACCGGAAGCCG ACGCGGGCGCAGCTCCTGCACGACGCCGGCTCGCTCGCCTCGGTCGTCAACATCGGCGGC GGATCGCGCGCGGGATTCGGCATCATGGACCACCTCGACTTCGACGCCTACGGCGGCCAC CATGCCGGCGCCGTGTCCCTCACGCTGGGCCTGCAGCAGCACGACTCCCACGCCGACGGC GGCGCCGGCGGCGTCAACATCGCGTTCGGCGCGCCGCCGCCCGCGCACCACCACGGGTAC CTGTTCGCTCCGACGGCGGCGGCGGCAGGCCATCAGATGGGCGGCGGCGTGCACCCGGGA CTACACCACCACGTCCAGTTCAGCGGCGCCGGCGCCGGCATCGACGGCGAGGCGGCGCAC GGGCAGGAGCACTACCGGGGCCTGCAGGGCGGCGGCGGGTTCCACCTCCTGCGTGACCTG GCCGGGTGATCGATCTGCTCCATCCACGGCCCGTGCATCCGCGGTCGGCCGCGCGCGAGC TCTAGCTGCGACTCCGAGTGAGCTGAGCGATGGGGACGTCGTGCCGGCGCCTAGCTAGCT ACCGGGTGTCCGCGCCGGATTCATGGCACGCACTCGATCGCGCGTGCGCTCATCCGGCCA CAGCGGCGCTGTGTACGTACGCACCGGATTTGTTTGGCTTGTTGCTTGCCTGGCTCGTGC CGGTCTCCATCGGTCTCGATCGCCGCCGGCGGCGGCTTGGCCGGGCCCGGGTCTAGCTGG CTAGCTAGCTGCCCTAGTTATACATAATATATGTATTTGTAGCGTGTACAGATCGGGTCG CGATCGAGCAGTTTGGACGCGCGCAGGTGCAGCTAGTACTAGTAGTAGCTAGCCCGCCGG AACTGCGTAGTTGATCAAACACGCATTGCATGCAGGTTAATTGCATTGTTTGTCAATTTC TTGAAGGATTCGACGACGTACGGCACAATTTATACCAGGCATTATTGACGATTTTCCTGG CAGAATATTCATCAGTCCATATGCCCATGC