Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027431_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:5123182:5127784:1 gene:Zm00001d027431 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:knotted related homeobox1 description: knotted related homeobox1
Sequence

ATGCAGCGCGGCGGTGATCAAGCAGGAGCGAGCCTGGGCATGGAGATGGGGGTGGGGTAC
GCCGGCGGCGGCGGCGGCGGCGAGTGCTCGTCGTCCTCGGCGGCTGCCGCGGCCGCGGCC
GCGGCGGAGGGGGAGGAGCGGCAGCTGCTCAAGGGGGAGATCGCGGTGCACCCGCTGTGC
GAGCAGCTAGTGGCGGCGCACGTGGGGTGCCTGCGCGTGGCCACGCCCATCGACCACCTC
CCCCTCATCGACGCCCAGCTCGCGCAGTCCAGCGGCCTCCTCCACTCCTACGCCGCCCAC
CACCGCCCCTTCCTCTCCCCGCACGACAAGCACGACCTCGACTCGTTCCTCGCGCAGTAC
CTGATGCTGCTGTGCTCGTTCCGGGAGCAGCTGCAGCAGCACGTCCGGGTGCACGCCGTG
GAGGCCGTCATGGCGTGCCGCGAGATCGAGCAGTCCCTGCAGGACCTAACCGGGGCGACA
CTTGAGGAAGGGACGGGGGCGACCATGTCAGAGGACGAGGACGAGGCGCCGATGCTGGAG
GTGGGCCTGGATATGGGCTCCGACGGGCACGACATGATGGGCTTCGGCCCGCTCATGCCC
ACCGACTCGGAGCGCTCGCTCATGGAGAGGGTCAGGCAGGAGCTCAAGATGGAGCTCAAG
CAGGGTTTCAAGTCGAGAATAGAGGATGTGCGGGAGGAGATCCTGAGGAAAAGGAGGGCC
GGGAAGCTGCCTGGGGACACCACCAGCATCCTCAAGCAATGGTGGCAGGAGCACTCCAAG
TGGCCATACCCCACGGAAGACGATAAGGCTAAGCTCGTCGAAGAGACCGGCCTGCAGCTG
AAGCAAATCAACAACTGGTTCATCAACCAGAGGAAGAGGAACTGGCACAACAACTCCCAG
ACGTCAACCCTCAAATCGAAGCGTAAAAGGTGA

Peptide Sequence

PEP ID

Zm00001d027431_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:5123182:5127784:1 gene:Zm00001d027431 transcript:Zm00001d027431_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:knotted related homeobox1 description: knotted related homeobox1
Sequence

MQRGGDQAGASLGMEMGVGYAGGGGGGECSSSSAAAAAAAAAEGEERQLLKGEIAVHPLC
EQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHDKHDLDSFLAQY
LMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEDEAPMLE
VGLDMGSDGHDMMGFGPLMPTDSERSLMERVRQELKMELKQGFKSRIEDVREEILRKRRA
GKLPGDTTSILKQWWQEHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSQ
TSTLKSKRKR

Transcript Sequence

Transcript ID

Zm00001d027431_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:5123182:5127784:1 gene:Zm00001d027431 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:knotted related homeobox1 description: knotted related homeobox1
Sequence

CTCTCTCTCTCTCATTCATCTCGCCTTTCTTTCTTACCGGCCGGCCGGCCGGCGGCTGGG
CTCTGCAATTCACCCAACTTTTCTCTGTTTTCACTACGATCTCAGGGCTCCGGCGACCGT
GCGGCCTCATCATCAGCTACAACCTACCAGCTGCTACCGTCTCGGTCGCCGCCTAGCTCT
CCGCAGCGGCTAGCTCATCCGGCCGGCCGCCCCTTTTCTCTTGCCGTTGCGCAGTTGCGC
CCCCTTCCCCGCGGCTTAGGAACCATCGAAAAGACGCCTCACCATCTCCTTTGTGTCCTT
GCTAACTAACTCCCCCATTAAATCCTCTCCTTCCTCCCGCGCTGGCCGTGTGGTCTCTCA
GCCCTCCGAGTTGATCCATAAGCTAGCGCCATCATCGATCGCCATATATACATAGCCAAG
GACGCACGCGCGCGCGCGCGCAAACCAGCGGGAGCGAACACCAACCGGCCGGACCAATTA
AGAAGCAGGCTAGCAAGTCGAAGAGGAAAGAAGAGAAGGGGGGTACCGGGGGTACCGGCC
GGTCATCGATCGAGCTTGGCGAAGCAGCGACCGCCGGGTCGTCGTCGTCGGTACATGCAT
GCAGCGCGGCGGTGATCAAGCAGGAGCGAGCCTGGGCATGGAGATGGGGGTGGGGTACGC
CGGCGGCGGCGGCGGCGGCGAGTGCTCGTCGTCCTCGGCGGCTGCCGCGGCCGCGGCCGC
GGCGGAGGGGGAGGAGCGGCAGCTGCTCAAGGGGGAGATCGCGGTGCACCCGCTGTGCGA
GCAGCTAGTGGCGGCGCACGTGGGGTGCCTGCGCGTGGCCACGCCCATCGACCACCTCCC
CCTCATCGACGCCCAGCTCGCGCAGTCCAGCGGCCTCCTCCACTCCTACGCCGCCCACCA
CCGCCCCTTCCTCTCCCCGCACGACAAGCACGACCTCGACTCGTTCCTCGCGCAGTACCT
GATGCTGCTGTGCTCGTTCCGGGAGCAGCTGCAGCAGCACGTCCGGGTGCACGCCGTGGA
GGCCGTCATGGCGTGCCGCGAGATCGAGCAGTCCCTGCAGGACCTAACCGGGGCGACACT
TGAGGAAGGGACGGGGGCGACCATGTCAGAGGACGAGGACGAGGCGCCGATGCTGGAGGT
GGGCCTGGATATGGGCTCCGACGGGCACGACATGATGGGCTTCGGCCCGCTCATGCCCAC
CGACTCGGAGCGCTCGCTCATGGAGAGGGTCAGGCAGGAGCTCAAGATGGAGCTCAAGCA
GGGTTTCAAGTCGAGAATAGAGGATGTGCGGGAGGAGATCCTGAGGAAAAGGAGGGCCGG
GAAGCTGCCTGGGGACACCACCAGCATCCTCAAGCAATGGTGGCAGGAGCACTCCAAGTG
GCCATACCCCACGGAAGACGATAAGGCTAAGCTCGTCGAAGAGACCGGCCTGCAGCTGAA
GCAAATCAACAACTGGTTCATCAACCAGAGGAAGAGGAACTGGCACAACAACTCCCAGAC
GTCAACCCTCAAATCGAAGCGTAAAAGGTGATGGAGGAGAGCTAGCTGCACCGTATATAC
CGTGTATGTAACGCACACCTGCTGACACACATGTACACATGTATACCATACCAACACGCT
AATCAAACGGAGCTCTGCATGGCGACTGTACTCACGGAAATAAAGAGGACCATATCGACC
GGTTCAACTGTATATCTAGCCATTAGTCTGACCACTGGCATATTTGTTTGCTGCGGCTGA
TACTTTGAGCTGATGATGTGTGGCTCACAGCATACTTTATTCTTGTTCTTATTGTGTTGA
CATAGTTTGTCCCCCATAATCTTGAGGATTAAAAA