Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027425_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:4979159:4994816:-1 gene:Zm00001d027425 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:agamous-like6 description: agamous-like6
Sequence

ATGGTGCGGGGCAAGACGCAGATGAAGCGGATAGAGAACCCGGCCAGTCGCCAGGTCACC
TTCTCCAAGCGCCGCAACGGCCTGCTCAAGAAGGCGTTCGAGCTCTCCGTCCTCTGCGAC
GCCGAGGTCGCGCTCGTCGTCTTCTCCCCGCGCGGCAAGCTCTACGAATTCGCCAGCGGA
AGTGCCCAGAAAACAATTGAACGTTATAGAACGTACACAAAGGATAATGTCAGCAACAAG
ACAGCACATCAGGACATTGAGCAAGTAAAAGCTGATGCTGAGGGCCTGGCAAAGAAACTG
GAAGCACTTGAAGCTTACAAAAGAAAACTTTTGGGTGAGAGGTTGGAAGAATGCTCCTTT
GAAGAACTGCACAGTTTGGAAGTGAAACTCGAAAAGAGCCTTCATTGCATCAGGGGAAGA
AAGGTTAGTTACTTTCCTCATGTCGTTTTATGCATACAGTATATGTATGATGTTTTAACA
AATGAATTGAAAGCTGCATACATACATATGCGTATCTGGTCTTACGTACATGGCAGACTC
AGCTGCTGGAGGAGCAACTCCATAAGCTGA

Peptide Sequence

PEP ID

Zm00001d027425_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:4979159:4994816:-1 gene:Zm00001d027425 transcript:Zm00001d027425_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:agamous-like6 description: agamous-like6
Sequence

MVRGKTQMKRIENPASRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGKLYEFASG
SAQKTIERYRTYTKDNVSNKTAHQDIEQVKADAEGLAKKLEALEAYKRKLLGERLEECSF
EELHSLEVKLEKSLHCIRGRKVSYFPHVVLCIQYMYDVLTNELKAAYIHMRIWSYVHGRL
SCWRSNSIS

Transcript Sequence

Transcript ID

Zm00001d027425_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:4979159:4994816:-1 gene:Zm00001d027425 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:agamous-like6 description: agamous-like6
Sequence

ACCCACCGAATCCGCCCCTCCCTCTTTCCGTTCCGCCTCGTTGCGCTCGCTCTCGCTGCG
CCGCCCGCCCCACCTCACGGAGCTCACGGCAACACCGGCAGGGACGGAAAAGGAAAGCCG
AGGAGGCGAGGAGAGAGAGATACAAGGCAGGCAGCCAGGCACAGGCAGCCCGCGGCTGGC
TACGGGGCCAAAACCCTTACGCGCGACGCGGCCCCCTCCTCTTCTTCTCTCTCCCACCAC
CGCCCTCCCCTTGCCATTTTTGGTGAGTGCCCCCTTTCCCTTCCCTAGACCAGATCCTCG
CCCCGTTTTCCACTTTTGCCTCCACCGCCGGCCCAATTCGGATAACAAGCTCCCTCCGCC
TCGCCGCGTCTCCTCCCAGCCGCAGGAGCCGCCGCCATCCGATCCGGAAGAGGGAGGAGG
GGGGAGGGAGGAGGATCTGTGTCCCGATTCGATTGGAGCTCTCGTCCCCGGCGGTCCAGG
ATGGTGCGGGGCAAGACGCAGATGAAGCGGATAGAGAACCCGGCCAGTCGCCAGGTCACC
TTCTCCAAGCGCCGCAACGGCCTGCTCAAGAAGGCGTTCGAGCTCTCCGTCCTCTGCGAC
GCCGAGGTCGCGCTCGTCGTCTTCTCCCCGCGCGGCAAGCTCTACGAATTCGCCAGCGGA
AGTGCCCAGAAAACAATTGAACGTTATAGAACGTACACAAAGGATAATGTCAGCAACAAG
ACAGCACATCAGGACATTGAGCAAGTAAAAGCTGATGCTGAGGGCCTGGCAAAGAAACTG
GAAGCACTTGAAGCTTACAAAAGAAAACTTTTGGGTGAGAGGTTGGAAGAATGCTCCTTT
GAAGAACTGCACAGTTTGGAAGTGAAACTCGAAAAGAGCCTTCATTGCATCAGGGGAAGA
AAGGTTAGTTACTTTCCTCATGTCGTTTTATGCATACAGTATATGTATGATGTTTTAACA
AATGAATTGAAAGCTGCATACATACATATGCGTATCTGGTCTTACGTACATGGCAGACTC
AGCTGCTGGAGGAGCAACTCCATAAGCTGAAGGAGAAGGAGATGAATCTGCGCAAGAGCA
ACGAAGATTTACGTGAAAAGGTAATGGGGGCGAAAACATTTTGCAGACGCTGCACTGCGG
CAAGCGGCATGCCAACAACCCAAGAAAACAGGCTTTGATTCTACCGCCTTACCTCGACTT
CCTGTGCTGTGATATCTTATGTGCATACAGTCTCCCCATTTCTGCAACATCATGATGCAC
GCATATGGTATAATCCTGATCCAAGCCATGCGTGCAGTGCAAGAAGCAGCCGCCGCCGCC
GCCGCCTATGCTGATGGCTCCTCCGCCGCCTCCAGCGCCGGCAGCCATCGATCACACGGG
GCCGAAGGATGTCGGGATGGACGTGGAGACGGAGCTGTACATAGGATTGCCCGGCAGAGA
TTACCGCTCAAACAACAAAGACATGACTGCACAGTAGCTGTCAGGTCAGGTCAGGTCAGG
CTAGCCAGCAGTGCAGAGAATAATCTTAGATCTGTGGTGCGGAGAACTGGAGATGCAAGC
CAAGCCCAAGCCAATCAACATGATAAGGATCATGAGTGTCGCGTCGTGTTTTACAAACCT
GTCCACCGTCCGTCAAAGGCACATGCGCCAGAACGTCCGTCAGAGAACACTTACCCCCTC
ATCTCCCTCTATTAGCTAGCTGCTCCGGCCTGCTCATGTCGAAACCTTCTGTTCAAGTAT
GTTCTCCTCCT