Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d027416_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:4840100:4842684:-1 gene:Zm00001d027416 gene_biotype:protein_coding transcript_biotype:protein_coding description:Oxygen-independent coproporphyrinogen III oxidase-like protein sll1917
Sequence	ATGCTCCGGCTGGCCTTCCCGCTCGTCTCCCATCTCCCACGCCGGAAACCGTCCGCAATC CGCCCACGCCCTCCACCCGCTCGACGATATGCCTCCGCGGCCGCCGTCACCGCCTCCTCC TTCTCCCCACCTCACTCTCCCTTGCTACCGCCGCTACCCCCGGCCTCCGCCTACGTCCAC CTTCCCTTCTGCCGCAAGCGCTGCCACTACTGCGACTTCCCCATCATCGCCCTCGGCTCA TCGTCAGCCCCCTCCCGTGGCGAGGCCGCGGAAGACCCCAGGATCGTTGACTACGTGAAC CTCTTGCTCCGCGAGGTCTCCGCCACGCGCCCGGTTTCCGACGATGGCGTGCCGCTCGAG ACCGTCTTCTTCGGTGGGGGCACGCCGTCGCTCGTCCCGCCGCGCCTGGTCGCCACGGTC CTCGACGCGCTGCGCGCCAGGTTCGGCCTGTCGGCGCGCCCCGAGGTCTCCATCGAGATG GACCCCGGCACGTTCGATGCCGCCAGGCTCAAGGAGCTCGTGGGCGTGGGCGTCAACCGC GTCTCGCTCGGCGTGCAGGCGTTCCAGGAGGACCTGCTGCGGGCGTGCGGACGCGCGCAC GGCGTGAAGGAGGTGCACGAGGCCGTCGCGATCGTGACGGCGTGCGAGGGGCTGCAGAAC TGGAGCATGGACCTCATCTCCTCGCTGCCGAATCAAACCGAGGAGATGTGGGAGGAAAGC TTGAGGTGCACGGTGGATGCAAGGCCCACTCACGTTTCTGTGTATGATCTGCAAATTGAG CAGGGCACCAAGTTTGGGCAGATGTATACTCCTGGTGTCTTTCCTCTGCCGAGTGACACC GAATCTGCAAACTTCTACAGGATTGCTTCGAAGCGACTTTCTGAAGCAGGTTATAACCAC TATGAGATCAGTAGCTACTGCAAGCCTGGATACGAGTGCAAGCACAACCTAACATACTGG CAAAACCGACCCTTCTATGCCTTTGGTCTTGGATCTGCGAGCTACATTAACGGTGTGAGG TACTCCAGGCCCAGAAGAACAAAGGAGTATGCAGAATGGGTTCAGAAGTTAGAGGATGGA ACGTGGAGACATGAGTCTAGAAGCTCTGATCTGAAGGACATGGCACTGGATGTGGTTATG CTATCGCTGAGAACAGCTTGGGGGCTTGATTTGCAAAGTTTCAGTAAATCCTTTGGGAAA AGCCTGGCGCTATCACTGTGTAACACATTTAAGCCTTTTGTGGAGAGTGGGCATGTAATT GCAATGGATATGGATCGACAAGCCTTGCCACATACTGATTTTGAGTTGGACCTGCAAAAT GAAGATGGTTTTGGAAGCAGAATTGCATTCATCCGTCTCAGCGACCCAGATGGATTTTTG TTGTCCAACGAGTTGATTTCACTTGCTTTTGGGATTATCTCACCTTGA

Peptide Sequence

PEP ID	Zm00001d027416_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:4840100:4842684:-1 gene:Zm00001d027416 transcript:Zm00001d027416_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Oxygen-independent coproporphyrinogen III oxidase-like protein sll1917
Sequence	MLRLAFPLVSHLPRRKPSAIRPRPPPARRYASAAAVTASSFSPPHSPLLPPLPPASAYVH LPFCRKRCHYCDFPIIALGSSSAPSRGEAAEDPRIVDYVNLLLREVSATRPVSDDGVPLE TVFFGGGTPSLVPPRLVATVLDALRARFGLSARPEVSIEMDPGTFDAARLKELVGVGVNR VSLGVQAFQEDLLRACGRAHGVKEVHEAVAIVTACEGLQNWSMDLISSLPNQTEEMWEES LRCTVDARPTHVSVYDLQIEQGTKFGQMYTPGVFPLPSDTESANFYRIASKRLSEAGYNH YEISSYCKPGYECKHNLTYWQNRPFYAFGLGSASYINGVRYSRPRRTKEYAEWVQKLEDG TWRHESRSSDLKDMALDVVMLSLRTAWGLDLQSFSKSFGKSLALSLCNTFKPFVESGHVI AMDMDRQALPHTDFELDLQNEDGFGSRIAFIRLSDPDGFLLSNELISLAFGIISP

Transcript Sequence

Transcript ID	Zm00001d027416_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:4840100:4842684:-1 gene:Zm00001d027416 gene_biotype:protein_coding transcript_biotype:protein_coding description:Oxygen-independent coproporphyrinogen III oxidase-like protein sll1917
Sequence	GGTACGCCACAGCTTCCATAATGCTCCGGCTGGCCTTCCCGCTCGTCTCCCATCTCCCAC GCCGGAAACCGTCCGCAATCCGCCCACGCCCTCCACCCGCTCGACGATATGCCTCCGCGG CCGCCGTCACCGCCTCCTCCTTCTCCCCACCTCACTCTCCCTTGCTACCGCCGCTACCCC CGGCCTCCGCCTACGTCCACCTTCCCTTCTGCCGCAAGCGCTGCCACTACTGCGACTTCC CCATCATCGCCCTCGGCTCATCGTCAGCCCCCTCCCGTGGCGAGGCCGCGGAAGACCCCA GGATCGTTGACTACGTGAACCTCTTGCTCCGCGAGGTCTCCGCCACGCGCCCGGTTTCCG ACGATGGCGTGCCGCTCGAGACCGTCTTCTTCGGTGGGGGCACGCCGTCGCTCGTCCCGC CGCGCCTGGTCGCCACGGTCCTCGACGCGCTGCGCGCCAGGTTCGGCCTGTCGGCGCGCC CCGAGGTCTCCATCGAGATGGACCCCGGCACGTTCGATGCCGCCAGGCTCAAGGAGCTCG TGGGCGTGGGCGTCAACCGCGTCTCGCTCGGCGTGCAGGCGTTCCAGGAGGACCTGCTGC GGGCGTGCGGACGCGCGCACGGCGTGAAGGAGGTGCACGAGGCCGTCGCGATCGTGACGG CGTGCGAGGGGCTGCAGAACTGGAGCATGGACCTCATCTCCTCGCTGCCGAATCAAACCG AGGAGATGTGGGAGGAAAGCTTGAGGTGCACGGTGGATGCAAGGCCCACTCACGTTTCTG TGTATGATCTGCAAATTGAGCAGGGCACCAAGTTTGGGCAGATGTATACTCCTGGTGTCT TTCCTCTGCCGAGTGACACCGAATCTGCAAACTTCTACAGGATTGCTTCGAAGCGACTTT CTGAAGCAGGTTATAACCACTATGAGATCAGTAGCTACTGCAAGCCTGGATACGAGTGCA AGCACAACCTAACATACTGGCAAAACCGACCCTTCTATGCCTTTGGTCTTGGATCTGCGA GCTACATTAACGGTGTGAGGTACTCCAGGCCCAGAAGAACAAAGGAGTATGCAGAATGGG TTCAGAAGTTAGAGGATGGAACGTGGAGACATGAGTCTAGAAGCTCTGATCTGAAGGACA TGGCACTGGATGTGGTTATGCTATCGCTGAGAACAGCTTGGGGGCTTGATTTGCAAAGTT TCAGTAAATCCTTTGGGAAAAGCCTGGCGCTATCACTGTGTAACACATTTAAGCCTTTTG TGGAGAGTGGGCATGTAATTGCAATGGATATGGATCGACAAGCCTTGCCACATACTGATT TTGAGTTGGACCTGCAAAATGAAGATGGTTTTGGAAGCAGAATTGCATTCATCCGTCTCA GCGACCCAGATGGATTTTTGTTGTCCAACGAGTTGATTTCACTTGCTTTTGGGATTATCT CACCTTGATCTAACATTAATATAGATGCATTTCCATTTGGTTGATTTGATGAGGCCGAAC CGAGGTCGGCTCATCTTT