Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027359_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:3651033:3661251:-1 gene:Zm00001d027359 gene_biotype:protein_coding transcript_biotype:protein_coding description: fusca homolog
Sequence

ATGGACGTCGAGGGCGAGGTCCCCGCCGCCGCCGCGGCGGCGGTGGCGAACGGCCTGGGC
GGCGCGGGCGCGGAGGAGGCCTCTCCGGCGCCGGTCTCGGCTGAGCAGCTCGACGTGGAG
GCGTACGCGGCGCAGTACTCGGGGCGGACCCGCCTCGTGCGCCTCCTCTTTGTCGCCGAC
CGGTGCGGGGTGGAGGCGATGCAGCTCGAGGCGCTGCGGATGGCTTACGACGAGATCAAG
CGCGGGGAGGACGTGCAGCTCCACCGCGACGTCGTCACCAAGATCGGCGGCCGCCTCGGT
CCGCGCTACGGCCTCGACCAGGCGTGGGTCTTCAGCGTCTCCCGCCGCGCCGACCAGCGC
AAGGAGAAGCTCGAGAGCGAGCTCAATGGATACAGGACTAACTTAATCAAAGAGAGCATC
AGAATGGGCTACAATGACATTGGTGATTTCTTCTATGCCCATGGCCAACTTTCAGATGCT
TTCAAAAGCTACATCAGGACTCGGGACTATTGCACCACTTCCAAACATATAGTTCAGATG
TGCATGAATGTGATTCTGGTTAGCATTGAGCTGGGGCAATATGCACATGTTTCAAACTAT
GTCAGCAAAGCAGAGCAAACCCCCGACTCTCTGGATCCTACCATTGTTGCAAAGCTGAAG
GCAGCTGCAGGATTAGCCAACTTGGAAACAAAGAAATACAAATTTGCTGCTCGTAAGTTT
GTTGAGACAGGAATTGAACTAGGAAACAACTTCTCTGAAGTCATAGCTCCTCAAGACGTG
GCAGTCTATGGTGCCCTTTGTGCACTTGCTTCTTTTGACCGTTCAGACCTGAAGAGCAAA
GTCATTGACAATATCAACTTCCGTAACTTTCTGGAGCTGGTGCCTGAAGTAAGGGAGCTG
GTTAATGATTTTTATGCAAGTCGCTATGGATCTTGCTTGGGTCATCTTGAGAAGCTAAAG
CCTAACCTGCTCCTGGATATCCATTTGCATCAGCATGTAGAGACTCTGTATATGGAGATT
CGCCACAAAGCGATCATACAGTACACACTTCCTTTTATATCTGTTGACCTCAACACGATG
GCAGCCGCCTTTAAGACTTCGGTCTCCATGCTGCAGAAGGAGCTGGCCGCACTGATTACT
GAGGACAAAATACAGGCCCGGATAGACTCCCACAACAAGATCCTTTACGCAAGGCATGCT
GACCAGAGAAATGCAACTTTCCAGCGTGTCCTTCAAACCGGCAATGACTTTGAGAGAGAT
GTCAAGTCCATGCTTCTGCGTGCCAACCTCCTCAAGCATGATTACATTCAGAAGACAAGC
GGACCAAGGAAGATGTAA

Peptide Sequence

PEP ID

Zm00001d027359_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:3651033:3661251:-1 gene:Zm00001d027359 transcript:Zm00001d027359_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description: fusca homolog
Sequence

MDVEGEVPAAAAAAVANGLGGAGAEEASPAPVSAEQLDVEAYAAQYSGRTRLVRLLFVAD
RCGVEAMQLEALRMAYDEIKRGEDVQLHRDVVTKIGGRLGPRYGLDQAWVFSVSRRADQR
KEKLESELNGYRTNLIKESIRMGYNDIGDFFYAHGQLSDAFKSYIRTRDYCTTSKHIVQM
CMNVILVSIELGQYAHVSNYVSKAEQTPDSLDPTIVAKLKAAAGLANLETKKYKFAARKF
VETGIELGNNFSEVIAPQDVAVYGALCALASFDRSDLKSKVIDNINFRNFLELVPEVREL
VNDFYASRYGSCLGHLEKLKPNLLLDIHLHQHVETLYMEIRHKAIIQYTLPFISVDLNTM
AAAFKTSVSMLQKELAALITEDKIQARIDSHNKILYARHADQRNATFQRVLQTGNDFERD
VKSMLLRANLLKHDYIQKTSGPRKM

Transcript Sequence

Transcript ID

Zm00001d027359_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:3651033:3661251:-1 gene:Zm00001d027359 gene_biotype:protein_coding transcript_biotype:protein_coding description: fusca homolog
Sequence

AAGACGGTTTTACTCATCTACCCACACGGCCACACCACAATCGTAAAATCGCAAGCCACG
GCCCACGGCATCGTCGCCTCCCTCCCTCCCTTCTCGGCGTCTCCTCTGATTCCTTCCTCT
CCTCTCGCCCCACGCCCCTCTCCATCTGCTCCCGCTCCGCCTCGCCTAGGGTTTTGCCCC
CAAACCTAGCCTCCCCCGAATCTCCCACGCCATGGACGTCGAGGGCGAGGTCCCCGCCGC
CGCCGCGGCGGCGGTGGCGAACGGCCTGGGCGGCGCGGGCGCGGAGGAGGCCTCTCCGGC
GCCGGTCTCGGCTGAGCAGCTCGACGTGGAGGCGTACGCGGCGCAGTACTCGGGGCGGAC
CCGCCTCGTGCGCCTCCTCTTTGTCGCCGACCGGTGCGGGGTGGAGGCGATGCAGCTCGA
GGCGCTGCGGATGGCTTACGACGAGATCAAGCGCGGGGAGGACGTGCAGCTCCACCGCGA
CGTCGTCACCAAGATCGGCGGCCGCCTCGGTCCGCGCTACGGCCTCGACCAGGCGTGGGT
CTTCAGCGTCTCCCGCCGCGCCGACCAGCGCAAGGAGAAGCTCGAGAGCGAGCTCAATGG
ATACAGGACTAACTTAATCAAAGAGAGCATCAGAATGGGCTACAATGACATTGGTGATTT
CTTCTATGCCCATGGCCAACTTTCAGATGCTTTCAAAAGCTACATCAGGACTCGGGACTA
TTGCACCACTTCCAAACATATAGTTCAGATGTGCATGAATGTGATTCTGGTTAGCATTGA
GCTGGGGCAATATGCACATGTTTCAAACTATGTCAGCAAAGCAGAGCAAACCCCCGACTC
TCTGGATCCTACCATTGTTGCAAAGCTGAAGGCAGCTGCAGGATTAGCCAACTTGGAAAC
AAAGAAATACAAATTTGCTGCTCGTAAGTTTGTTGAGACAGGAATTGAACTAGGAAACAA
CTTCTCTGAAGTCATAGCTCCTCAAGACGTGGCAGTCTATGGTGCCCTTTGTGCACTTGC
TTCTTTTGACCGTTCAGACCTGAAGAGCAAAGTCATTGACAATATCAACTTCCGTAACTT
TCTGGAGCTGGTGCCTGAAGTAAGGGAGCTGGTTAATGATTTTTATGCAAGTCGCTATGG
ATCTTGCTTGGGTCATCTTGAGAAGCTAAAGCCTAACCTGCTCCTGGATATCCATTTGCA
TCAGCATGTAGAGACTCTGTATATGGAGATTCGCCACAAAGCGATCATACAGTACACACT
TCCTTTTATATCTGTTGACCTCAACACGATGGCAGCCGCCTTTAAGACTTCGGTCTCCAT
GCTGCAGAAGGAGCTGGCCGCACTGATTACTGAGGACAAAATACAGGCCCGGATAGACTC
CCACAACAAGATCCTTTACGCAAGGCATGCTGACCAGAGAAATGCAACTTTCCAGCGTGT
CCTTCAAACCGGCAATGACTTTGAGAGAGATGTCAAGTCCATGCTTCTGCGTGCCAACCT
CCTCAAGCATGATTACATTCAGAAGACAAGCGGACCAAGGAAGATGTAAAGATTGCGGGC
GTCGCTGCTAGGCAAGGCTTCCTGCTGCATGCCTCTCCACTTTTTTTTTTGAAGAATTGT
TCTGTGACATAAAAGGGACCGAAGTCTGTCTAAATGCCCTCCCCCTCTTTCTTTTTATTG
GTTGATGAAAGTTATTGTCGAAGTAATGTATGGTTGAGCATCTGGATGTGATTATTTGTC
ATGCTCGTTTTCTAGGCAAGATTTAGTTTTGAACTTGCCGGGTACCTAGGAAAGGGGTAC
CCAAGGCGAGGC