Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027352_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:3489406:3491807:1 gene:Zm00001d027352 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxine/pyridoxamine 5'-phosphate oxidase 2
Sequence

ATGGCCGGAGGCGGCCCCGCCGCGTCGGCGCTTTCAAGCCCCTGGAGGGCTCTGCTCCAG
CGAGCGCTGGACGCCAACGCCCACCTCAGGCACTCCACCTACTTCCAACTCGCTACGGTG
GGCGCCGCCGGCAGGCCGGCGAACCGCACCGTCGTGTTCAGGGGTTTTCAGGAACTCTGT
GATAAGATTCAGATTAACACGGACGCCCGAACCAACAAGATTGGTGAGATCAAGAGCTGC
CCCTTTGGTGAGATTTGTTGGTACTTCACAGATAGCTGGGAGCAATTCCGTATCAGTGGC
AGCATAGATGTGATTGATGCTTCTACTACAGACCCTGCCAAGCTCCAGCACAAGGAGAAA
GCATGGTTTTCAAGTTCAGTGAAGTCGAGATCGCAGTACTTAGGACCACAGCCAGGCATT
CCGGTTCTAGATGATGAGCATGTTAAGGACGTTCATCTCGATCCTTTAGCTGGCCCAGTA
GATGCCTTTTGCCTTCTGGTTCTTGATCCGGAAAAGGTTGATTATTTGAATCTGAAAAGC
AATCAAAGGTTGATCTTTACAAGAAGACAAAAGGATGATGGATCCAATGATTGGATGGCA
GTAAAAGTTAGTCCTTAA

Peptide Sequence

PEP ID

Zm00001d027352_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:3489406:3491807:1 gene:Zm00001d027352 transcript:Zm00001d027352_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxine/pyridoxamine 5'-phosphate oxidase 2
Sequence

MAGGGPAASALSSPWRALLQRALDANAHLRHSTYFQLATVGAAGRPANRTVVFRGFQELC
DKIQINTDARTNKIGEIKSCPFGEICWYFTDSWEQFRISGSIDVIDASTTDPAKLQHKEK
AWFSSSVKSRSQYLGPQPGIPVLDDEHVKDVHLDPLAGPVDAFCLLVLDPEKVDYLNLKS
NQRLIFTRRQKDDGSNDWMAVKVSP

Transcript Sequence

Transcript ID

Zm00001d027352_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:3489406:3491807:1 gene:Zm00001d027352 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxine/pyridoxamine 5'-phosphate oxidase 2
Sequence

CTAGCGAATCGGGTCCGTTAATCTGCACCGGCCTCTCCCTCCCATCCGGCGTTGGCGAAG
CCGCGCGTCGACGAGAGGGGCGGAGTCGGCGACGAGCAGATGGCCGGAGGCGGCCCCGCC
GCGTCGGCGCTTTCAAGCCCCTGGAGGGCTCTGCTCCAGCGAGCGCTGGACGCCAACGCC
CACCTCAGGCACTCCACCTACTTCCAACTCGCTACGGTGGGCGCCGCCGGCAGGCCGGCG
AACCGCACCGTCGTGTTCAGGGGTTTTCAGGAACTCTGTGATAAGATTCAGATTAACACG
GACGCCCGAACCAACAAGATTGGTGAGATCAAGAGCTGCCCCTTTGGTGAGATTTGTTGG
TACTTCACAGATAGCTGGGAGCAATTCCGTATCAGTGGCAGCATAGATGTGATTGATGCT
TCTACTACAGACCCTGCCAAGCTCCAGCACAAGGAGAAAGCATGGTTTTCAAGTTCAGTG
AAGTCGAGATCGCAGTACTTAGGACCACAGCCAGGCATTCCGGTTCTAGATGATGAGCAT
GTTAAGGACGTTCATCTCGATCCTTTAGCTGGCCCAGTAGATGCCTTTTGCCTTCTGGTT
CTTGATCCGGAAAAGGTTGATTATTTGAATCTGAAAAGCAATCAAAGGTTGATCTTTACA
AGAAGACAAAAGGATGATGGATCCAATGATTGGATGGCAGTAAAAGTTAGTCCTTAAGCT
GCTGCAAAAACTTTATTTGTGAGCTTCTCTTGGTAACTAGACTATCATGATTCTTCTGTG
TTTTCATATCATTTGAAATGTTAGGTGCATATCATTATGTATATTTGAGAGGCCTTTTCA
TAGTCATACATTTATATATTGGGAATGCTTTGTAATCTCAGGGATTTGTTATTTTTTGTT
ACCCTCAAATATAGAAGATAAAGACTGTAAGGTATTTAGGAAGGAGTCAAAGCA