Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027349_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:3443598:3446350:-1 gene:Zm00001d027349 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence

ATGAACCTGCCGACGCCGCTCCCGCCCACCAGCTCCCCGGCCGCGGCTCCCCGCGCCAGC
CGTGCGCCTGTCGTGCCTGCTGCCCGACGCGGCACCGGCCGCCGGCGTCGGCGGCAGAAA
CCGTCTTCGTCCCCGTCCACCCGCGAGACCGAGGCCGAGTACGAGCAGCCGGACGCCCTC
GCCCGCATCCTCCGCACAGAGGCCGCCATCTCGGGCGTCTCCCGCAAGGCTGCGGCCGCG
CGGCAGCAGTCCACGAACCTTTGGCCCCGCGCCGTCCTCGAGGCCCTCGACTCCGCTGTC
GCCGCCTGCCGCTGGGAGTCCGCCCTCGAGATCTTCGAGCTGCTGCGGAAGCAGCACTGG
TACGAGCCGAGGTCGCAGACCTACGCGCGGTTGCTGATGATGCTCGGCAAGTGCCGGCAG
CCCGGTCCCGCCGCCGGCCTCTTCAGGGAGATGCTCTCGGAGCGGCTCCGGCCGACGGCA
GACGTGTACACGGCGCTTATCGGCGCGTACGGCTACAGCGGCTTGCTGGAGCACGCGCTG
GCCGCTGTCGAGCAGATGAAAGGCGCCGCTGACTGCAAGCCGGACGGGTACACCTTCTCC
GTCCTCGTTGATTGCTGCGCCAAGTCGCGCCGCTTCGATCTGATCCCTGCCGTTCTCGAC
GAGATGTCGTACCTGGGGATCGAATGCAATTCGGTTATCCACAACGCGATAATTGACGGG
TACGGCAAGGCCGCCATGTTCGAGGAGATGGAGGGTGCGCTCTCCACCATGCTTGAGAGT
GGTAGCAATGTGCCGGACATTTACACCATGAACTCCGTCGTCGGGGCGTATGGCAACCAT
GGAAGAACAGATGAGATGGAGAAGAGTTACAGTGAGTTTCAGCTGATGGGTGTTGAGCCA
GATACCAAGACGTTCAACATCATGATCAGGTCTTATGGTAAGGCTGGCATGTATGTCAAG
ATGATGTCGATATTCAGATACATGAAGAAACGGTTCTTCTCACCAACTGCCGTTACCTTC
AACACAGTAATAGAGTGTTTCGGACGTGCTGGCGACATCGAAAAGATGGAGTACTATTTC
CGTCTTATGAAAATTCAGGGTGTCAAACCCAACCCCATCACCTACTGCTCGCTGGTTAAC
GGGTACAGCAAAGCCGGGCTTCTTGATAAGGTTGCGGGGGTCATTCGACAGACCGAGAAC
ACTAATGTTGTCTTGGACACACCATTCTTTAACTGTGTGATAAGCGCATATGCCAAGTCT
GGGGATATCAAAATCATGGAGGAGATGCTGCAGCTTATGAAGGAGAAGAGGTGCAAGCCT
GACAGAATAACTTATGCCACCATGATTCAGGCATACACTGCACACGGGATGGATGAAGCT
GCTATGTTGCTGGAGATAGAAGCTGAAAGATTTGATAAACGGTTGCTGGGATCGGTTTCT
GACATTGATGGCAAATAA

Peptide Sequence

PEP ID

Zm00001d027349_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:3443598:3446350:-1 gene:Zm00001d027349 transcript:Zm00001d027349_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence

MNLPTPLPPTSSPAAAPRASRAPVVPAARRGTGRRRRRQKPSSSPSTRETEAEYEQPDAL
ARILRTEAAISGVSRKAAAARQQSTNLWPRAVLEALDSAVAACRWESALEIFELLRKQHW
YEPRSQTYARLLMMLGKCRQPGPAAGLFREMLSERLRPTADVYTALIGAYGYSGLLEHAL
AAVEQMKGAADCKPDGYTFSVLVDCCAKSRRFDLIPAVLDEMSYLGIECNSVIHNAIIDG
YGKAAMFEEMEGALSTMLESGSNVPDIYTMNSVVGAYGNHGRTDEMEKSYSEFQLMGVEP
DTKTFNIMIRSYGKAGMYVKMMSIFRYMKKRFFSPTAVTFNTVIECFGRAGDIEKMEYYF
RLMKIQGVKPNPITYCSLVNGYSKAGLLDKVAGVIRQTENTNVVLDTPFFNCVISAYAKS
GDIKIMEEMLQLMKEKRCKPDRITYATMIQAYTAHGMDEAAMLLEIEAERFDKRLLGSVS
DIDGK

Transcript Sequence

Transcript ID

Zm00001d027349_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:3443598:3446350:-1 gene:Zm00001d027349 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence

AATTACCAAGCACATACTCGCACTCTGCGACGGCACACGCCGCTCCGGCGTCCAGCAAAT
CCACGGCCCTGCTGAATTTGTCTCGCCGCTCATCGACCCTGTTTCACTATTTGGAACTGA
ATTATCTCATCCAGCGATTCCAGGTCCCCGTAGCGCCATGAACCTGCCGACGCCGCTCCC
GCCCACCAGCTCCCCGGCCGCGGCTCCCCGCGCCAGCCGTGCGCCTGTCGTGCCTGCTGC
CCGACGCGGCACCGGCCGCCGGCGTCGGCGGCAGAAACCGTCTTCGTCCCCGTCCACCCG
CGAGACCGAGGCCGAGTACGAGCAGCCGGACGCCCTCGCCCGCATCCTCCGCACAGAGGC
CGCCATCTCGGGCGTCTCCCGCAAGGCTGCGGCCGCGCGGCAGCAGTCCACGAACCTTTG
GCCCCGCGCCGTCCTCGAGGCCCTCGACTCCGCTGTCGCCGCCTGCCGCTGGGAGTCCGC
CCTCGAGATCTTCGAGCTGCTGCGGAAGCAGCACTGGTACGAGCCGAGGTCGCAGACCTA
CGCGCGGTTGCTGATGATGCTCGGCAAGTGCCGGCAGCCCGGTCCCGCCGCCGGCCTCTT
CAGGGAGATGCTCTCGGAGCGGCTCCGGCCGACGGCAGACGTGTACACGGCGCTTATCGG
CGCGTACGGCTACAGCGGCTTGCTGGAGCACGCGCTGGCCGCTGTCGAGCAGATGAAAGG
CGCCGCTGACTGCAAGCCGGACGGGTACACCTTCTCCGTCCTCGTTGATTGCTGCGCCAA
GTCGCGCCGCTTCGATCTGATCCCTGCCGTTCTCGACGAGATGTCGTACCTGGGGATCGA
ATGCAATTCGGTTATCCACAACGCGATAATTGACGGGTACGGCAAGGCCGCCATGTTCGA
GGAGATGGAGGGTGCGCTCTCCACCATGCTTGAGAGTGGTAGCAATGTGCCGGACATTTA
CACCATGAACTCCGTCGTCGGGGCGTATGGCAACCATGGAAGAACAGATGAGATGGAGAA
GAGTTACAGTGAGTTTCAGCTGATGGGTGTTGAGCCAGATACCAAGACGTTCAACATCAT
GATCAGGTCTTATGGTAAGGCTGGCATGTATGTCAAGATGATGTCGATATTCAGATACAT
GAAGAAACGGTTCTTCTCACCAACTGCCGTTACCTTCAACACAGTAATAGAGTGTTTCGG
ACGTGCTGGCGACATCGAAAAGATGGAGTACTATTTCCGTCTTATGAAAATTCAGGGTGT
CAAACCCAACCCCATCACCTACTGCTCGCTGGTTAACGGGTACAGCAAAGCCGGGCTTCT
TGATAAGGTTGCGGGGGTCATTCGACAGACCGAGAACACTAATGTTGTCTTGGACACACC
ATTCTTTAACTGTGTGATAAGCGCATATGCCAAGTCTGGGGATATCAAAATCATGGAGGA
GATGCTGCAGCTTATGAAGGAGAAGAGGTGCAAGCCTGACAGAATAACTTATGCCACCAT
GATTCAGGCATACACTGCACACGGGATGGATGAAGCTGCTATGTTGCTGGAGATAGAAGC
TGAAAGATTTGATAAACGGTTGCTGGGATCGGTTTCTGACATTGATGGCAAATAATGCAT
ACAACCATTAGTCCTAATCTAAGGCCGGGGAAAAGATGTTGCTGCGCAAGAGGTGCTTTT
GGTGGAGATAGCTTGGAATCCATCCACAACCGGATCTGAACAAAAGGGTCGGGCCAATTG
GATGCAGAGCCATGCAGATAGCAAGGAAAGCAGATATCTATAACCCTTTCTAAATTCCTG
GTCCGATAATTAGTTCCATGCTCAGGTAATCCATCTGTTTGGGGCTCATATTTAGGATCA
CTGTTCAACAAGACATCTGGTCAGTTTGGTCACTATGTTGTCACCACTGATGTGCTGGAT
ATATTTCTTATTGGCAAACCGAATTCTGTTGCCGGTAAGCATGTCGTCACCGAGTTTGGT
CACTACGTTGTCACCAAAAGGCCACACATGCCACTGTGCTGATCCTATTGCCAGTTGTAG
CAGCCTCCAAGTGAGACTGGGAGGCTGGGGATCGAGAGCATGAAGCAAGCAGCATGGATG
ACGCTGTCAGCTCACGAACAAATCGCTGGTGGAGGCACTCGCAGGTCATGGGATTTGCGT
TGCAGGCTTGGTCCAAGTGAAACGAACTATATAGATCTTCAATGGCCGCAGAAGTGGTAA
AACCCTGCAAGGAATTCATGTTGGAGTCATCACATTTGTCTGTAGTCACTGAACATTTAT
GTGCTGATGAAGTGGTAAAACCATGCAGATGAAGTGGTAAAACCATGCAGAATGTAGCGT
CCGCATTCTGTATCTGTTGTTGATCAATTATGTATTCAGATTTGTTTTTTGCGCCTACTT
TTGTGCAATGTAAAATAAGCAGAGTATCAAGCTATCTGATCAATGCACGTTCACGAACAG
AGCAGTGAAGTTGACATGGCCAGAGCCAGTGAAATCCATGAAATAAACCTGGTCGTTCCA
TACAGGTTTATGAGTTTATTATCCCTCTGTACTCGAACCAATAACT