Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d027324_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:1:2959559:2972146:1 gene:Zm00001d027324 gene_biotype:protein_coding transcript_biotype:protein_coding description:THO complex subunit 1
Sequence	ATGCAGTACGGGAATTCTTTGGATAGCGGAGAAAGTAACTGCCTGATAACTCGCCTTCTT GATATTGTGCTTTACCTTTGCGAAAGAGGGCATGTTGAAGGTGGTATGGTATTCCAGCTG TTAGAAGACCTAACTGAAATGTCAACAATCAAAGACTGCAAAGATATCTTTGGGTATATT GAGAGCCAGCAAGATGTATTGGGGAAGCAAGAACTTTTTGGACGTGGCAAACTAGTTATG CTAAGGACTTGCAACCAACTTCTTCGCAGACTATCGAAGGCAAATGATGTGGTGTTCTGT GGGCGCATTATTATGTTTCTTGCACATTTTTTCCCATTATCGGAGCGTTCAGCTCTCAAC ATTAAAGGGGTTTTCAATACATCAAATGTAACAAAGTACGAAAAGGATGCTATGGATGGA ATCTCTGTTGATTTCAACTTCTACAAGACCCTCTGGAGTCTACAGGAACATTTCAGCAAC CCAGCTTTGACTTCTACAAATCCGGCAAAATGGCAAAAGTTCTCTTCTAATCTGGCGGTT GTGTTGAACACATTTGAAGCTCAACCTCTTAGCGATGATGATGGAAAACTTAACAATCTG AACGAGGAGGAAGATGCTGCTTTCAATATTAAGTACCTGACTAGCAGTAAATTAATGGGT TTGGAGTTGAAGGACCCAAGTTTTCGACGCCACATCCTTGTTCAGTGTCTTATATTTTTT GACTATCTCAAGGCACCTGGGAAAAATGACAAAGAAGGTCCAACAGGGAGCATGATAGAG GAAATTAAATCTTGTGAAGAGCATGTTAAGAAGCTTCTGGAAATTATTCCCCCCAAAGGG AAGGAATTTCTGAAAAGCATTGAACATATTCTTGAGCGGGAGAAAAATTGGGTTTGGTGG AAGCGAGATGGGTGTCTCGCATTTGAAAAGCCACCCTTTGAAAAGAAACCAGGTCAGGCT GGTGCCAGAAAACGGAAGCCAAGGTGGAGACTGGGAAGCAAAGAGCTCAGCCAACTTTGG AAATGGGCAGAACAAAACCCCAATGTCTTGACTGATCCTGACCGTGTCCGCATGCCATCA ATTACAGAATATTGGAAACCACTTGCAGAAGATATGGATCCATCTGCTGGAATTGAAGAG GAGTATCACCACAAAAGTAATCGGGTGTACTGTTGGAAAGGACTACGGTTTTCGGCCAGG CAGGACTTGGATGGATTCGCGCGGTTTTCAGACTACGGGATCGAAGGGGTTGTACCTTCA GAACTGCTGCCACCTGAAGTAAATGCCAAGTTTTCTTCTAAACCCGCCGAGAAGGTTAAG CGGACGAGAAAGGAAGATTCAAAAAGCGTGTCAGCTCATCAGCCCAGAGAGCATCAGGTT GCTGCGACACCTGAAACCGACGGCGGTGTCGACCCGGAAGAAGGCGAAGGCGCGGCGCCA ATGGATTCCGACAACGGCGCGGTGGGGGATAGCCAGAAACGGAGCCCGGGGGAGGTCTCT GGCCCTGAAAGCGGGCAGTGCGAGCCTGAGGCGGACGCTGATGATAACGTGAGGACGGAA ACTACCAGTAGGGATGCTCGTGCCGGAGAGATGAAATGA

Peptide Sequence

PEP ID	Zm00001d027324_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:1:2959559:2972146:1 gene:Zm00001d027324 transcript:Zm00001d027324_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:THO complex subunit 1
Sequence	MQYGNSLDSGESNCLITRLLDIVLYLCERGHVEGGMVFQLLEDLTEMSTIKDCKDIFGYI ESQQDVLGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHFFPLSERSALN IKGVFNTSNVTKYEKDAMDGISVDFNFYKTLWSLQEHFSNPALTSTNPAKWQKFSSNLAV VLNTFEAQPLSDDDGKLNNLNEEEDAAFNIKYLTSSKLMGLELKDPSFRRHILVQCLIFF DYLKAPGKNDKEGPTGSMIEEIKSCEEHVKKLLEIIPPKGKEFLKSIEHILEREKNWVWW KRDGCLAFEKPPFEKKPGQAGARKRKPRWRLGSKELSQLWKWAEQNPNVLTDPDRVRMPS ITEYWKPLAEDMDPSAGIEEEYHHKSNRVYCWKGLRFSARQDLDGFARFSDYGIEGVVPS ELLPPEVNAKFSSKPAEKVKRTRKEDSKSVSAHQPREHQVAATPETDGGVDPEEGEGAAP MDSDNGAVGDSQKRSPGEVSGPESGQCEPEADADDNVRTETTSRDARAGEMK

Transcript Sequence

Transcript ID	Zm00001d027324_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:2959559:2972146:1 gene:Zm00001d027324 gene_biotype:protein_coding transcript_biotype:protein_coding description:THO complex subunit 1
Sequence	GCGGTCCATCTGTCTTGTGTTTCTCCTTCCTCATTCCTCAGCTCGAGCTCCTCGACGGCT CGCCAGTCTGCCGCCGCGCACGGCGCATCTGTTCCTTCTGCTCTGCGACGGCGAGCCTCT CCCCTCCCTCCGTGCTCGTATCGTAGCCTATTTTCGCCGCCGCAGCTTGCCCAGTGCTGT TATCTTGTGTTCGGCACCGCGTCAAAGGCTGACCCTCTCCAGGCGCCTGGTAGATCGCCC AGACTCAACCGGGGAGTTTTCAGGAGCGCGTTGTCTAGGAACGAACCCCCGGAAACATTT TCCCTTCAGACGGTTCAGGAAGCAATTAAACCTCAGAAGGAAACCGTGTTGGTTCTAGAG GAGAATCAGTCCTTGGAAAATGCTCTTCGAACTTTGCTGCAGGAGCTTGTGTCATCTGCG GTCCAATCGGATAAAAAGATTATGCAGTACGGGAATTCTTTGGATAGCGGAGAAAGTAAC TGCCTGATAACTCGCCTTCTTGATATTGTGCTTTACCTTTGCGAAAGAGGGCATGTTGAA GGTGGTATGGTATTCCAGCTGTTAGAAGACCTAACTGAAATGTCAACAATCAAAGACTGC AAAGATATCTTTGGGTATATTGAGAGCCAGCAAGATGTATTGGGGAAGCAAGAACTTTTT GGACGTGGCAAACTAGTTATGCTAAGGACTTGCAACCAACTTCTTCGCAGACTATCGAAG GCAAATGATGTGGTGTTCTGTGGGCGCATTATTATGTTTCTTGCACATTTTTTCCCATTA TCGGAGCGTTCAGCTCTCAACATTAAAGGGGTTTTCAATACATCAAATGTAACAAAGTAC GAAAAGGATGCTATGGATGGAATCTCTGTTGATTTCAACTTCTACAAGACCCTCTGGAGT CTACAGGAACATTTCAGCAACCCAGCTTTGACTTCTACAAATCCGGCAAAATGGCAAAAG TTCTCTTCTAATCTGGCGGTTGTGTTGAACACATTTGAAGCTCAACCTCTTAGCGATGAT GATGGAAAACTTAACAATCTGAACGAGGAGGAAGATGCTGCTTTCAATATTAAGTACCTG ACTAGCAGTAAATTAATGGGTTTGGAGTTGAAGGACCCAAGTTTTCGACGCCACATCCTT GTTCAGTGTCTTATATTTTTTGACTATCTCAAGGCACCTGGGAAAAATGACAAAGAAGGT CCAACAGGGAGCATGATAGAGGAAATTAAATCTTGTGAAGAGCATGTTAAGAAGCTTCTG GAAATTATTCCCCCCAAAGGGAAGGAATTTCTGAAAAGCATTGAACATATTCTTGAGCGG GAGAAAAATTGGGTTTGGTGGAAGCGAGATGGGTGTCTCGCATTTGAAAAGCCACCCTTT GAAAAGAAACCAGGTCAGGCTGGTGCCAGAAAACGGAAGCCAAGGTGGAGACTGGGAAGC AAAGAGCTCAGCCAACTTTGGAAATGGGCAGAACAAAACCCCAATGTCTTGACTGATCCT GACCGTGTCCGCATGCCATCAATTACAGAATATTGGAAACCACTTGCAGAAGATATGGAT CCATCTGCTGGAATTGAAGAGGAGTATCACCACAAAAGTAATCGGGTGTACTGTTGGAAA GGACTACGGTTTTCGGCCAGGCAGGACTTGGATGGATTCGCGCGGTTTTCAGACTACGGG ATCGAAGGGGTTGTACCTTCAGAACTGCTGCCACCTGAAGTAAATGCCAAGTTTTCTTCT AAACCCGCCGAGAAGGTTAAGCGGACGAGAAAGGAAGATTCAAAAAGCGTGTCAGCTCAT CAGCCCAGAGAGCATCAGGTTGCTGCGACACCTGAAACCGACGGCGGTGTCGACCCGGAA GAAGGCGAAGGCGCGGCGCCAATGGATTCCGACAACGGCGCGGTGGGGGATAGCCAGAAA CGGAGCCCGGGGGAGGTCTCTGGCCCTGAAAGCGGGCAGTGCGAGCCTGAGGCGGACGCT GATGATAACGTGAGGACGGAAACTACCAGTAGGGATGCTCGTGCCGGAGAGATGAAATGA AACAGTGGCATGAAGAGGAACCAGATTTTGTCGACTCACTGACATTGAACCAGATTTTGA ACAGCTGAGATACATTCTCTTGTTGGTGTGTACTGTGTAGTAGACATCAGTAGCCATCCA TTTG