Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027296_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:1:2109196:2113478:-1 gene:Zm00001d027296 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF3527 domain protein
Sequence

ATGGGGCAAGATGCTGGCTTCAAACGCGAGGATCATTCTGGATTGGGATCAGGTCCTCAA
ACTTTGAAGGTCTCCTGCTGCACTAGTGAAGAAAACGAGAGTCGAAACAGAAGATACCAT
CAGTTGAAATGCTCAGAGAGCAACTCGAGGCAGTTGCACCTGGACTACGTCCCAAATTTC
CACTGCAGGAGCTTGCCAACGAGAAGCCGCAAGACGAATGCTGAGCAAAGCACCGTGGGG
AAGCGTGGTTCTATGTACCAGAGCTCCAGCGAAATAAGCAGGATCAGAAAGATCCAGGAG
GGCAGGAGGAAAATAGATTCTGCATTCGATGGGGACGCGTTCCTGTCCTTTGATATTGTC
GATGCATCCTCTCGCCCTAGCACAAGTGGAGCTTATCTGCATTCCCATCAGAATCGGAGG
TCGGGCGCTAAGCCTTCTGTGGACACCGCTAAGCGAGCGTCAAAGGACTTCCTGGACCTT
CAGTTCCGTGAACATCCTGATGAGAATTTTAAGCTAGATCGACCACGCTTGGATAGTACC
TTGTTGAAAAACGATGATGGTTTCTTGGAGATTTCTCTCGAGAAAGAGATAGCAAAGGGT
GGCCCGTGCAGAAATGCAGCTCCTATCCTGCTAAACACTGGGTCAGGCAAATGCACTGAC
CTGCAAAAGATGAATGGATGCCCCAGTGAGAACAACTGTGGTGACAAGGGGAGAGATTCA
GCAAGCAGTTCCAAATCAACGCCTGTGAAAGTAAGCTCCTTTGACGGATCCTGCCAATCT
GACGGTGCTCAACACCATATCACAGAGAACAACACTAAAGCTCGATCAAGCCCCTTCAAG
AAGATGCTGGACCCTATTATGAAGTCCAAATCTCCTAGGAGCCCATCTATCATGGAAAGA
GGAGGCTCCAACTCCGCAACTGGGCCAGGAAGCAGGAAAAACTCCGTGTCTCGAAAATCA
CTGCTGGGTGATTTTTCAAGAAGTGAACAAGCATCTAATTGCCAGCCCAATGGGCAAACA
CAGAAGCGTGTAAACAAATCTGCTTTGTCACCTGCTCATCTCCAAGCGGTTCTTAGATTG
GATTCCAAGAACGGTGTCCAGGTTTTTGAATTCTGTGTTGACGGCCCAGGAGAATCCATT
TCCGCCAGGAATTGGAAAAACGGTGATGAGTTGAGCTCTATATACACCTTCCATAGTGGC
GGGAAACGGTCCAGTGCTGCTGGAAGGATCTCCAAAGATGGAGGCTGGGATTTACCCCCA
ATCGTTGGGCAGGTGCAGGTTTCATCATACTTATGCTCTGAAGTTGGAAAAGACGGTACG
GTGAATAACTCTGTCGTCACCGAGTTTGTTTCGTACGACATTGGTCATGCGAGGCGGATT
GTTGAGGAGAAGACAGGGGCACTTCAACAGCCACAGAGGACTAGTCTGACGGAAGAGAAC
AAGACTGGGAGAAATAACTCAGATGTATCGACATCTTGCCCGTGGTCCGAAGAAGACCTT
CATCCTTATTTGGAGATTGCGGCGACTGTGATAGAGGTTCCGTTTAGCAGATACAAGTCC
GAAGAGGTGAAGAATGGTTCATCTCCTTGTACTGTCAAAGTTGTTGCACCTAGTGGACTG
CATGGTTCGCCGAGTGACGATGAAGCCGGCGGCCCATCTCCCTTGCTAGATAGATGGAGG
TACGGTGGGGGTTGCGACTGTGGCGGATGGGACATGGCTTGCCCCATCGACGTTATTGGC
AACACATATGATAATAGCTGGGCTGAGTCTATAGCTACCAATGTGAAACATCCCATGGAG
CTCTTTGTTCAGGGTAGCAAAGAAGAGCTCCCCGTCCTTTCTATGAAGGAGAACGGGAGA
GGGCAGTTTGTGGTGGATTTCCATGGGCGACTATCAGCGTTACAGGCGTTTTCAGTATGC
ATCTCTCTGCTGCACTGTTCTGAAGCTTCGATCGCCATCAGCCTCAAGAAGGGGAAGCAG
AAGCTGTATTCCAGCTCGCTCAAGTTGCTCCTCGAGGAGGACGTGAGGCACCTGATCGAG
GCAGTCACAGCTGAAGAGAAGAAGAAGAAGAAGCGGAGTAGAGAAAAGGCGCCTCCTCCG
TCTGTTCTGCTTGACCCGCCTTTTTCTCCCATCGGAAGAGTGTAG

Peptide Sequence

PEP ID

Zm00001d027296_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:1:2109196:2113478:-1 gene:Zm00001d027296 transcript:Zm00001d027296_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF3527 domain protein
Sequence

MGQDAGFKREDHSGLGSGPQTLKVSCCTSEENESRNRRYHQLKCSESNSRQLHLDYVPNF
HCRSLPTRSRKTNAEQSTVGKRGSMYQSSSEISRIRKIQEGRRKIDSAFDGDAFLSFDIV
DASSRPSTSGAYLHSHQNRRSGAKPSVDTAKRASKDFLDLQFREHPDENFKLDRPRLDST
LLKNDDGFLEISLEKEIAKGGPCRNAAPILLNTGSGKCTDLQKMNGCPSENNCGDKGRDS
ASSSKSTPVKVSSFDGSCQSDGAQHHITENNTKARSSPFKKMLDPIMKSKSPRSPSIMER
GGSNSATGPGSRKNSVSRKSLLGDFSRSEQASNCQPNGQTQKRVNKSALSPAHLQAVLRL
DSKNGVQVFEFCVDGPGESISARNWKNGDELSSIYTFHSGGKRSSAAGRISKDGGWDLPP
IVGQVQVSSYLCSEVGKDGTVNNSVVTEFVSYDIGHARRIVEEKTGALQQPQRTSLTEEN
KTGRNNSDVSTSCPWSEEDLHPYLEIAATVIEVPFSRYKSEEVKNGSSPCTVKVVAPSGL
HGSPSDDEAGGPSPLLDRWRYGGGCDCGGWDMACPIDVIGNTYDNSWAESIATNVKHPME
LFVQGSKEELPVLSMKENGRGQFVVDFHGRLSALQAFSVCISLLHCSEASIAISLKKGKQ
KLYSSSLKLLLEEDVRHLIEAVTAEEKKKKKRSREKAPPPSVLLDPPFSPIGRV

Transcript Sequence

Transcript ID

Zm00001d027296_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:2109196:2113478:-1 gene:Zm00001d027296 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF3527 domain protein
Sequence

AGAGCGGCTCGTCACTCTTCCCAAACTGTCCCTGCCTCCATTTCTTTTCCTTTTGTTTGT
CGCCTCTCCCTTCGCTCGCCCTGTCTGCGCTTTCGCTTTCCTTTCGCCTCCCACCACCAA
AAAGAGGAGCAGAGGAGAGGTTTGTGTGACAGCGTGAGCGAGCGAGTGATGATTAACACC
TCAGCCGGCAGACAGCCGCCAAAGCAGTAGCGTAAGAAAGAGAGTTAGTAGAGCCCAGAT
CGAGGGAGGGAGGAGTAGCACCGAGCACGAGCATCTCCACTCCACGCGCGCCCCATGCCC
GTCCGCTCCACCTCCATGAGCGTCAGCTGAGCAAGACAAGGAAGGGGAATCTCTCCCTCA
TTCGCCTTGCCGTCTTGATCTGTCGGCTCCCGGCGGCAACACCCTACAGGTTTCATCTAT
GGGGCAAGATGCTGGCTTCAAACGCGAGGATCATTCTGGATTGGGATCAGGTCCTCAAAC
TTTGAAGGTCTCCTGCTGCACTAGTGAAGAAAACGAGAGTCGAAACAGAAGATACCATCA
GTTGAAATGCTCAGAGAGCAACTCGAGGCAGTTGCACCTGGACTACGTCCCAAATTTCCA
CTGCAGGAGCTTGCCAACGAGAAGCCGCAAGACGAATGCTGAGCAAAGCACCGTGGGGAA
GCGTGGTTCTATGTACCAGAGCTCCAGCGAAATAAGCAGGATCAGAAAGATCCAGGAGGG
CAGGAGGAAAATAGATTCTGCATTCGATGGGGACGCGTTCCTGTCCTTTGATATTGTCGA
TGCATCCTCTCGCCCTAGCACAAGTGGAGCTTATCTGCATTCCCATCAGAATCGGAGGTC
GGGCGCTAAGCCTTCTGTGGACACCGCTAAGCGAGCGTCAAAGGACTTCCTGGACCTTCA
GTTCCGTGAACATCCTGATGAGAATTTTAAGCTAGATCGACCACGCTTGGATAGTACCTT
GTTGAAAAACGATGATGGTTTCTTGGAGATTTCTCTCGAGAAAGAGATAGCAAAGGGTGG
CCCGTGCAGAAATGCAGCTCCTATCCTGCTAAACACTGGGTCAGGCAAATGCACTGACCT
GCAAAAGATGAATGGATGCCCCAGTGAGAACAACTGTGGTGACAAGGGGAGAGATTCAGC
AAGCAGTTCCAAATCAACGCCTGTGAAAGTAAGCTCCTTTGACGGATCCTGCCAATCTGA
CGGTGCTCAACACCATATCACAGAGAACAACACTAAAGCTCGATCAAGCCCCTTCAAGAA
GATGCTGGACCCTATTATGAAGTCCAAATCTCCTAGGAGCCCATCTATCATGGAAAGAGG
AGGCTCCAACTCCGCAACTGGGCCAGGAAGCAGGAAAAACTCCGTGTCTCGAAAATCACT
GCTGGGTGATTTTTCAAGAAGTGAACAAGCATCTAATTGCCAGCCCAATGGGCAAACACA
GAAGCGTGTAAACAAATCTGCTTTGTCACCTGCTCATCTCCAAGCGGTTCTTAGATTGGA
TTCCAAGAACGGTGTCCAGGTTTTTGAATTCTGTGTTGACGGCCCAGGAGAATCCATTTC
CGCCAGGAATTGGAAAAACGGTGATGAGTTGAGCTCTATATACACCTTCCATAGTGGCGG
GAAACGGTCCAGTGCTGCTGGAAGGATCTCCAAAGATGGAGGCTGGGATTTACCCCCAAT
CGTTGGGCAGGTGCAGGTTTCATCATACTTATGCTCTGAAGTTGGAAAAGACGGTACGGT
GAATAACTCTGTCGTCACCGAGTTTGTTTCGTACGACATTGGTCATGCGAGGCGGATTGT
TGAGGAGAAGACAGGGGCACTTCAACAGCCACAGAGGACTAGTCTGACGGAAGAGAACAA
GACTGGGAGAAATAACTCAGATGTATCGACATCTTGCCCGTGGTCCGAAGAAGACCTTCA
TCCTTATTTGGAGATTGCGGCGACTGTGATAGAGGTTCCGTTTAGCAGATACAAGTCCGA
AGAGGTGAAGAATGGTTCATCTCCTTGTACTGTCAAAGTTGTTGCACCTAGTGGACTGCA
TGGTTCGCCGAGTGACGATGAAGCCGGCGGCCCATCTCCCTTGCTAGATAGATGGAGGTA
CGGTGGGGGTTGCGACTGTGGCGGATGGGACATGGCTTGCCCCATCGACGTTATTGGCAA
CACATATGATAATAGCTGGGCTGAGTCTATAGCTACCAATGTGAAACATCCCATGGAGCT
CTTTGTTCAGGGTAGCAAAGAAGAGCTCCCCGTCCTTTCTATGAAGGAGAACGGGAGAGG
GCAGTTTGTGGTGGATTTCCATGGGCGACTATCAGCGTTACAGGCGTTTTCAGTATGCAT
CTCTCTGCTGCACTGTTCTGAAGCTTCGATCGCCATCAGCCTCAAGAAGGGGAAGCAGAA
GCTGTATTCCAGCTCGCTCAAGTTGCTCCTCGAGGAGGACGTGAGGCACCTGATCGAGGC
AGTCACAGCTGAAGAGAAGAAGAAGAAGAAGCGGAGTAGAGAAAAGGCGCCTCCTCCGTC
TGTTCTGCTTGACCCGCCTTTTTCTCCCATCGGAAGAGTGTAGTGTAGCCACCAGGCATT
GAAGAACCCATTGCATTGTTTATGATTTGTCTTGATGTTCATATTTTCCTTTTAGGATTT
CATACTTGCATGGAGTGTTAGATTCTAGCAGGCAGTAAGGTTCATAATGTACTGTTGAGA
TGTTGAATAGAAGGGGGGGAAATAAAGTAGGAGGAGCCAGTTTTCTTGTGAATG