Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d027292_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:2019934:2021379:1 gene:Zm00001d027292 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAS-transcription factor 53 description:Scarecrow-like protein 6
Sequence	ATGCACATGCCGCCGCTCGGCCTCGGCGCCGCAGAGGCCTGGGAGCCCCACGCGCAACCT CCGGGTCCGGGCGGCCTCACCCTCTCGCACGCCCAGCAGACCCACGACAGCACCTTCCTC GGCTGGTTTATTGCCGACGACGTCGCCATGTCGGGCGTCATGGACGACCACAACTCCCAC TCGGTACTTCATGACCTCGACCACATACCCTCTTCCTCCGTGCCGCCGCCGCAGTTCCAG CCTCTCGCGCCCCACGTGCACTACCCGCCCAAGCTGCACCACCACCAAAACCCCGTGGTG CCCGCGTCGCCTCCCAAGCACACGCTCCTGAAACCCAAGCCGGAGGCGCCGGGGACCGAC GACGCTTCCACGGCGGTGGACCAGCTCGCCGAGGCCGCCAAGCTTGCCGAAGCCGGAGAC GTTTTCGGCGCCCGCGAGATACTGGCGCGGCTCAACTACCTGCTCCCGCCCGGCGCCGCG ACGGCGACGCCACTGCTCCGCTCCGCCTTCTACTTCAAGGAGGCTCTGCGCGCTGCCCTG TCCACCACCGCCTCCGCAACCGCCGCCGCCGCCGCCGCGCCGGTGGACGTGCTCCTAAAG CTCGGTGCCTACAAGGACTTCTCCGAGCTCTGCCCCGTGCTCCAGTTCGCGCACTTCACC TGCGTCCAGGCCATGCTCGACGAGCTGGGTGGCGCTGCCTGCATCCACGTGCTGGACTTG GACATCGGCGTCGGCGAGCAGTGGGCGTCGCTCATGCAGGAGCTGGCCAGCCGCCGCCCG GGCGCCGCGCTCAAGGTCACCGCATTGGTGTCCGCGGCGTCGCACCACCCGCTGGAGCTG CAGCTCGTCCACGAGAACCTGTCCAACTTCGCGGCCGAGACGCGCGTCCCGTTCCAGCTG GCCTTCTTCAACCTCGACGCCATGGACCCCGCGGAGCTGCTCGCTACCGCCGCCGGCGAC GCCGTCGCCGTCCACCTCCCGGCCGGCTCCGTGCACGCCCCCGCGGTGCCGTCCGTCCTT CACCTCGTCAGGCGGCTTGGCGCCAAGCTTGTCGTCTCCGTGGACCGCAGCTGTGACCGC GGCGAGCTGCCCTTCGCCGCGCACTTCCAGTCCTGCGTGTTCCTGCTCGAGTCCCTGGAC GCCGTCGGCACGGGCCCCGACATCACCGCCAAGATCGAGCGCTTCTTGATCCAGCCGAGG ATCGAGAGGTGCCTGGCGGAGAGGTACCGCGCCGCGGCGGCGGGCGACAAGACGCCGCCC TGGCGGGCAATGCTCGTGTCGGCCGGCTTCGTGCCGGTGCAGGCAAGCAGCTTGGCGGAG GCGCAGGCGGAGGCGTTGCTCAAGAAGGTGCCCGTGCGGGGCTTCCGCGTCGAGAAGCGC GCCGGCTCGCTCGTCCTGCATTGGCAACGCGGGGAGCTGCTCTCCGTGTCCGCCTGGAGA TGCTAG

Peptide Sequence

PEP ID	Zm00001d027292_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:2019934:2021379:1 gene:Zm00001d027292 transcript:Zm00001d027292_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAS-transcription factor 53 description:Scarecrow-like protein 6
Sequence	MHMPPLGLGAAEAWEPHAQPPGPGGLTLSHAQQTHDSTFLGWFIADDVAMSGVMDDHNSH SVLHDLDHIPSSSVPPPQFQPLAPHVHYPPKLHHHQNPVVPASPPKHTLLKPKPEAPGTD DASTAVDQLAEAAKLAEAGDVFGAREILARLNYLLPPGAATATPLLRSAFYFKEALRAAL STTASATAAAAAAPVDVLLKLGAYKDFSELCPVLQFAHFTCVQAMLDELGGAACIHVLDL DIGVGEQWASLMQELASRRPGAALKVTALVSAASHHPLELQLVHENLSNFAAETRVPFQL AFFNLDAMDPAELLATAAGDAVAVHLPAGSVHAPAVPSVLHLVRRLGAKLVVSVDRSCDR GELPFAAHFQSCVFLLESLDAVGTGPDITAKIERFLIQPRIERCLAERYRAAAAGDKTPP WRAMLVSAGFVPVQASSLAEAQAEALLKKVPVRGFRVEKRAGSLVLHWQRGELLSVSAWR C

Transcript Sequence

Transcript ID	Zm00001d027292_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:2019934:2021379:1 gene:Zm00001d027292 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAS-transcription factor 53 description:Scarecrow-like protein 6
Sequence	ATGCACATGCCGCCGCTCGGCCTCGGCGCCGCAGAGGCCTGGGAGCCCCACGCGCAACCT CCGGGTCCGGGCGGCCTCACCCTCTCGCACGCCCAGCAGACCCACGACAGCACCTTCCTC GGCTGGTTTATTGCCGACGACGTCGCCATGTCGGGCGTCATGGACGACCACAACTCCCAC TCGGTACTTCATGACCTCGACCACATACCCTCTTCCTCCGTGCCGCCGCCGCAGTTCCAG CCTCTCGCGCCCCACGTGCACTACCCGCCCAAGCTGCACCACCACCAAAACCCCGTGGTG CCCGCGTCGCCTCCCAAGCACACGCTCCTGAAACCCAAGCCGGAGGCGCCGGGGACCGAC GACGCTTCCACGGCGGTGGACCAGCTCGCCGAGGCCGCCAAGCTTGCCGAAGCCGGAGAC GTTTTCGGCGCCCGCGAGATACTGGCGCGGCTCAACTACCTGCTCCCGCCCGGCGCCGCG ACGGCGACGCCACTGCTCCGCTCCGCCTTCTACTTCAAGGAGGCTCTGCGCGCTGCCCTG TCCACCACCGCCTCCGCAACCGCCGCCGCCGCCGCCGCGCCGGTGGACGTGCTCCTAAAG CTCGGTGCCTACAAGGACTTCTCCGAGCTCTGCCCCGTGCTCCAGTTCGCGCACTTCACC TGCGTCCAGGCCATGCTCGACGAGCTGGGTGGCGCTGCCTGCATCCACGTGCTGGACTTG GACATCGGCGTCGGCGAGCAGTGGGCGTCGCTCATGCAGGAGCTGGCCAGCCGCCGCCCG GGCGCCGCGCTCAAGGTCACCGCATTGGTGTCCGCGGCGTCGCACCACCCGCTGGAGCTG CAGCTCGTCCACGAGAACCTGTCCAACTTCGCGGCCGAGACGCGCGTCCCGTTCCAGCTG GCCTTCTTCAACCTCGACGCCATGGACCCCGCGGAGCTGCTCGCTACCGCCGCCGGCGAC GCCGTCGCCGTCCACCTCCCGGCCGGCTCCGTGCACGCCCCCGCGGTGCCGTCCGTCCTT CACCTCGTCAGGCGGCTTGGCGCCAAGCTTGTCGTCTCCGTGGACCGCAGCTGTGACCGC GGCGAGCTGCCCTTCGCCGCGCACTTCCAGTCCTGCGTGTTCCTGCTCGAGTCCCTGGAC GCCGTCGGCACGGGCCCCGACATCACCGCCAAGATCGAGCGCTTCTTGATCCAGCCGAGG ATCGAGAGGTGCCTGGCGGAGAGGTACCGCGCCGCGGCGGCGGGCGACAAGACGCCGCCC TGGCGGGCAATGCTCGTGTCGGCCGGCTTCGTGCCGGTGCAGGCAAGCAGCTTGGCGGAG GCGCAGGCGGAGGCGTTGCTCAAGAAGGTGCCCGTGCGGGGCTTCCGCGTCGAGAAGCGC GCCGGCTCGCTCGTCCTGCATTGGCAACGCGGGGAGCTGCTCTCCGTGTCCGCCTGGAGA TGCTAG