Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026703_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:10:150491629:150493346:1 gene:Zm00001d026703 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thylakoidal processing peptidase 1 chloroplastic
Sequence

ATGGCCGTGGGGGGCCTTCTGCGGGGCCTCGTTTCGCCCCCCGCCTGGCTACCCTGCCAT
GAGCTCTTCGCCTCCTGGCACCACTGGCTTCCCTCCCTCCCGCGCCTCCGCCCGCCCGCA
TCCGACGGCTTCAAGCTTCTCTTGGTGCTGCTGCTCTTCTCCGCCGCTCTAGCCGAGGTC
CGCTACATCGCCTCCTCCTCCATGGCGCCCACGCTTCGTCCAGGCGACCGAGCCGTCGCC
GAGAAGGTTACATACTTGTTCCGGAGGCCATCTATTGGGGATATAGTGTTTTTCAAAGTA
CCGACTGCTGTGCAGAATTATGGTGTCAATAAGGATGTTGTCTTTATTAAGAGAGTATTG
GCAACACCAGGAGACTTCATTGAGGTCCGACAAGGGCAGCTTATTGTAAATGGTGTCGCA
CTAAAGGAGCATTACGCAGCAGCAACGTCATTGTACACAATGGAAGCAATGCGCCTTCCT
GAAGGTCACGTATTTGTCATGGGTGACAACCGCAATAACAGCTGTGATTCTCGTGCCTGG
GGGCCTCTTCCCGTTGCCAACATCGTTGGAAGGTACATGACATCATTTACAAGATCCTCT
TTCCAGTAA

Peptide Sequence

PEP ID

Zm00001d026703_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:10:150491629:150493346:1 gene:Zm00001d026703 transcript:Zm00001d026703_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thylakoidal processing peptidase 1 chloroplastic
Sequence

MAVGGLLRGLVSPPAWLPCHELFASWHHWLPSLPRLRPPASDGFKLLLVLLLFSAALAEV
RYIASSSMAPTLRPGDRAVAEKVTYLFRRPSIGDIVFFKVPTAVQNYGVNKDVVFIKRVL
ATPGDFIEVRQGQLIVNGVALKEHYAAATSLYTMEAMRLPEGHVFVMGDNRNNSCDSRAW
GPLPVANIVGRYMTSFTRSSFQ

Transcript Sequence

Transcript ID

Zm00001d026703_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:150491629:150493346:1 gene:Zm00001d026703 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thylakoidal processing peptidase 1 chloroplastic
Sequence

AGGGCAGAGGGAGAGGGAGGGCACCGGCACACCATGGCCGTGGGGGGCCTTCTGCGGGGC
CTCGTTTCGCCCCCCGCCTGGCTACCCTGCCATGAGCTCTTCGCCTCCTGGCACCACTGG
CTTCCCTCCCTCCCGCGCCTCCGCCCGCCCGCATCCGACGGCTTCAAGCTTCTCTTGGTG
CTGCTGCTCTTCTCCGCCGCTCTAGCCGAGGTCCGCTACATCGCCTCCTCCTCCATGGCG
CCCACGCTTCGTCCAGGCGACCGAGCCGTCGCCGAGAAGGTTACATACTTGTTCCGGAGG
CCATCTATTGGGGATATAGTGTTTTTCAAAGTACCGACTGCTGTGCAGAATTATGGTGTC
AATAAGGATGTTGTCTTTATTAAGAGAGTATTGGCAACACCAGGAGACTTCATTGAGGTC
CGACAAGGGCAGCTTATTGTAAATGGTGTCGCACTAAAGGAGCATTACGCAGCAGCAACG
TCATTGTACACAATGGAAGCAATGCGCCTTCCTGAAGGTCACGTATTTGTCATGGGTGAC
AACCGCAATAACAGCTGTGATTCTCGTGCCTGGGGGCCTCTTCCCGTTGCCAACATCGTT
GGAAGGTACATGACATCATTTACAAGATCCTCTTTCCAGTAACTGGGGTTCCACTCAATG
TTCGTCCTCATAAATCAATCATAGTTAGAGAGTTGTGGAGCCAGGCGGCTGCTATCTTGT
CAATTTGTAGCGATGTTTGTTGTATATGATTCTCACTTAATTTGGACATGCATGATTGTG
TACTTGTGTTGTTATAAAGTAAGCATGTTTTGTTGTTG