Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026700_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:10:150353627:150355852:1 gene:Zm00001d026700 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ domain-containing protein TNFAIP1 isoform 2
Sequence

ATGGCGGCGGCGGCCGCACCCGTGTCCCTGGTCTTCTTGTGCACGCGTGGGCAGCAGCAG
CTGGTACTTGTCGACGCCACCAAGCCCCCTCTGCCCCTGCGCAGCCGCGCTTTCTCCGTC
CGCGCCGCTCAGCAGCAGCAGCAGCAGCAGCACCGCGCCCGCCCACGGCCCCCTCGCAGG
AACAAGCCCCCCGGACCCGCGCGCCGTCCGCCCAGGGTCCCTCTGGACCAAGATGAATAC
GACGGCGGCTATGATGACCGGGAGGAGGGGAGGTTCGCTGGGGGCACCCGGGCCGCCGCC
ATGCCCAAGCCACCGGCCGGCTTCGTGCTGGATGACCAGGGCAGGTGCATCGCCGCAGCA
TCCAAGCGCATCGTCACCATCCTTAATATTTTCTTTCTTTCTGTCGTCACAAATGAAATC
AAGCCAAACCAACATTGTGATATGCAGATCGACGACACCAACAACCGCCCCTTGGAGTGC
ATAATCAGGAGAGTATTCCGGAGCTCGCAGGACCACGACTGCATGCTTCTCTGCCCAGTT
GACATGCCTGTGCAGGTCCTCAAGAGCACAAATTTCAGTGGCTGGGTAGCTGTCGATGAC
GACCAACTCAAGCAAATCATTCCATCTGTTGCCTATGCCCTTGCCAGAGTACATATGCAC
TTTGTAGAAAGCGGATTCTGTTATACAGCAAGGGGTGGCTTCTGCTTTCCTGAAGAGGCC
ATTCAAGAGTTTCATGATTCCGGTGAAGGTGTGCCTTTTGAAGGTGTAGAGATTTGCTGC
TTCAATTTGGATGGTGCACACTATATGATTTATACACCAGTTGATCCTCTTCTTTTTGTC
GCAATCAAGGATAAGGATGGTGTGCTACGCATCGCTGAGGATGATCTGATGGAAGACCCT
GCAGTTCTGGATGCGGTAGATGAAGAGACAGAATTTACAGCTCTAGTGGAGGAGGAGGAG
GCCCTTCTTGAAACGGTACTTGGTGAAAGGTGA

Peptide Sequence

PEP ID

Zm00001d026700_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:10:150353627:150355852:1 gene:Zm00001d026700 transcript:Zm00001d026700_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ domain-containing protein TNFAIP1 isoform 2
Sequence

MAAAAAPVSLVFLCTRGQQQLVLVDATKPPLPLRSRAFSVRAAQQQQQQQHRARPRPPRR
NKPPGPARRPPRVPLDQDEYDGGYDDREEGRFAGGTRAAAMPKPPAGFVLDDQGRCIAAA
SKRIVTILNIFFLSVVTNEIKPNQHCDMQIDDTNNRPLECIIRRVFRSSQDHDCMLLCPV
DMPVQVLKSTNFSGWVAVDDDQLKQIIPSVAYALARVHMHFVESGFCYTARGGFCFPEEA
IQEFHDSGEGVPFEGVEICCFNLDGAHYMIYTPVDPLLFVAIKDKDGVLRIAEDDLMEDP
AVLDAVDEETEFTALVEEEEALLETVLGER

Transcript Sequence

Transcript ID

Zm00001d026700_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:150353627:150355852:1 gene:Zm00001d026700 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ domain-containing protein TNFAIP1 isoform 2
Sequence

GATAGAAGGGGCGAGCGCGCTGCGCTATCCATCCCACCATCCATTCTCTGCCAAGCTTTC
CGACTCCCAGCCAACACGAAATGGCGGCGGCGGCCGCACCCGTGTCCCTGGTCTTCTTGT
GCACGCGTGGGCAGCAGCAGCTGGTACTTGTCGACGCCACCAAGCCCCCTCTGCCCCTGC
GCAGCCGCGCTTTCTCCGTCCGCGCCGCTCAGCAGCAGCAGCAGCAGCAGCACCGCGCCC
GCCCACGGCCCCCTCGCAGGAACAAGCCCCCCGGACCCGCGCGCCGTCCGCCCAGGGTCC
CTCTGGACCAAGATGAATACGACGGCGGCTATGATGACCGGGAGGAGGGGAGGTTCGCTG
GGGGCACCCGGGCCGCCGCCATGCCCAAGCCACCGGCCGGCTTCGTGCTGGATGACCAGG
GCAGGTGCATCGCCGCAGCATCCAAGCGCATCGTCACCATCCTTAATATTTTCTTTCTTT
CTGTCGTCACAAATGAAATCAAGCCAAACCAACATTGTGATATGCAGATCGACGACACCA
ACAACCGCCCCTTGGAGTGCATAATCAGGAGAGTATTCCGGAGCTCGCAGGACCACGACT
GCATGCTTCTCTGCCCAGTTGACATGCCTGTGCAGGTCCTCAAGAGCACAAATTTCAGTG
GCTGGGTAGCTGTCGATGACGACCAACTCAAGCAAATCATTCCATCTGTTGCCTATGCCC
TTGCCAGAGTACATATGCACTTTGTAGAAAGCGGATTCTGTTATACAGCAAGGGGTGGCT
TCTGCTTTCCTGAAGAGGCCATTCAAGAGTTTCATGATTCCGGTGAAGGTGTGCCTTTTG
AAGGTGTAGAGATTTGCTGCTTCAATTTGGATGGTGCACACTATATGATTTATACACCAG
TTGATCCTCTTCTTTTTGTCGCAATCAAGGATAAGGATGGTGTGCTACGCATCGCTGAGG
ATGATCTGATGGAAGACCCTGCAGTTCTGGATGCGGTAGATGAAGAGACAGAATTTACAG
CTCTAGTGGAGGAGGAGGAGGCCCTTCTTGAAACGGTACTTGGTGAAAGGTGATGGATGC
CAGGGAGTACTTGTACAGGAAGAGGAAGAGAGACTCGTCTGATTGTAGTAGAATAGAATG
GAATGGAATGGAATGGAGTGCATTTGCAACTGTAAGCAGCTGCAACCTGCAATACTTGGA
GTGGAGTGATGGACAACGCAGTTGATAAGCAACTGCTGCTGCTAATCTTTGTCTAGTGTA
GGATAGATAGCTCAATGGGACGATCAAAGCTATTTATGATGTGCTCATGTGTTTGAATTA
ATTAATAAAATTACCCCAATCTGAATAGAATACCTGGTGGATGGAAGAAATGAAGCAAAA
TA