Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026696_T045
CDS Infomation

cds chromosome:B73_RefGen_v4:10:150183880:150199610:1 gene:Zm00001d026696 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transportin-1
Sequence

ATGCCATCGGCACTCTACATGTCTATGGATCAGTATATTCAGGGATTATTCAACCTTGCA
AAGGACTCTTCAGCAGATGTTCGGAAACTGGTTTGTTCAGCCTGGGTTCAGCTCATTGAA
GTTCGCCCATCAATTTTGGAGCCACATCTTAAAAATGTTACTGAATTGATTCTGCAAGCT
AATAAAGATTCAGATGATGAAGTTGCTCTGGAAGCTTGTGAGTTCTGGTCTGCATACTGT
GATGTGAGCATGCCTCCTGAAGGTTTACAGGAGTTCTTGCCGCACTTAATCCCGACTTTG
TTGTCGAACATGGTATATGCTGACGGCGATGAGTCCCTTGATGATGCTGAGGAAGATGAA
TCCTTTCCAGACAGGGACCAGGATTTGAAGCCCCGCTTCCATGATTCTCGATTGCATGGA
TCGGAAACTGGAGATGACGATGATGATGCTGATGCTGTAAATGTCTGGAACCTGCGGAAG
TGTAGTGCTGCTGGGTTGGATGTTCTCTCTAATGTGTTTGGTGACAGCATCCTTCCAACT
TTAATGCCATTGATTGAGCAAAACTTGGCTCGAACAGATGATGATTCTTGGAAGGAGAGG
GAAACTGCTGTTTTATGTCTAGGCGCTATAGCAGAGGGGTGCATTAGTGGTCTATACCCA
CACCTTCCTCAGATTGTTGCCTTTCTAATCCCACTTCTTGATGATAAATTTCCTCTTATA
CGGAGTATTACGTGTTGGACGCTCTCTCGATACAGCAAATTCATTGTTCAGAGCCTTGAT
CATCCAAATGGACGCGGACAATTTGATAAGATTCTTATGGGAGTGCTCAGAAGGATATTG
GATACTAACAAAAGAGTGCAAGAGGCTGCTTGTTCGGCGTTTGCAATCCTTGAAGAGGAA
GCTTCTGAAGAATTAGTACCCCATTTGGAAGTAATTTTGCAGCACCTCATGTGTGCCTAT
AGAAAATACCAGAGACGAAATCTCCGGATACTCTATGACGCCCTCGGTACCCTGGCTGAT
GCTGTTGGAGCAGAATTAAATCAGGCAAAATATCTAGACATATTTATGCCGCCTTTAATC
ACAAAGTGGCAGCAACTTTCCAATTATGACAAAGATCTATTTCCACTCCTTGAATGCTTT
ACATCTATCGCACAGGCATTGGGACCAGGATTTGCTCAGTTTGCGGAACCAGTGTTTCAA
AGGTGCATTAATCTTATCCATTCGCAACAGTTGTCAAAGATTGATCCTACTGCAGCTGGT
GCGGTGTATGATAGAGAATTCATTGTTTGTTCGTTGGACCTACTATCAGGACTTGCAGAA
GGTCTTGGCGCTGGTATTGAAAGTCTTGTTGCACAGAGCAATTTGAGAGATCTACTTTTG
CAATGCTGCATGGATGAAGCAGCTGATGTTCGACAAAGTGCCCTTGCACTTCTTGGAGAC
CTTTCTAGGGTTTGCCCAATACATTTGCATCCACGCCTTCAAGAATTTCTTACTGTTGCA
GCGAAGCAACTGAACCCTCAATCTGTGAAGGATGCGGTATCAGTAGCTAACAATGCTTGT
TGGGCTATTGGAGAATTAGCAATCAAGATTGGCAAAGAAATAGCGCCTGTGGTGATCACC
GTTGTTTCGTGCTTGGTTCCCATTCTAAAATCCCCAGAGGGTTCGAACAAGTCACTTGTT
GAAAACAGCGCGATCACTCTTGGGAGGCTTAGCTGGGTGTGTCCAGACATCGTGGCCCCT
CATATGGAGCATTTCATGCAAGCATGGTGCAAGGCGTTGTGCATGATCAGAGATGATTTT
GAGAAAGAGGACTCGTTTCATGGATTGTGTGCAATGGTGGCAGCAAACCCTACAGGAGGC
GCCGGTTCATTAGCTTACATCTGCCAGGCCTGTGCGAGTTGGACTGAGATAAAAAGTGAA
GGTCTTCACAATGAGGTGTGCCAGATTCTGAATGGCTACAAGCAGCTGCTTGGAAACGGT
GGGTGGGAACAATGCATGGCCACCCTGCAACCGGATGTTGTGCAGAAATTAGCTAGATAC
GGAGTATGA

Peptide Sequence

PEP ID

Zm00001d026696_P045
PEP Infomation

pep chromosome:B73_RefGen_v4:10:150183880:150199610:1 gene:Zm00001d026696 transcript:Zm00001d026696_T045 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transportin-1
Sequence

MPSALYMSMDQYIQGLFNLAKDSSADVRKLVCSAWVQLIEVRPSILEPHLKNVTELILQA
NKDSDDEVALEACEFWSAYCDVSMPPEGLQEFLPHLIPTLLSNMVYADGDESLDDAEEDE
SFPDRDQDLKPRFHDSRLHGSETGDDDDDADAVNVWNLRKCSAAGLDVLSNVFGDSILPT
LMPLIEQNLARTDDDSWKERETAVLCLGAIAEGCISGLYPHLPQIVAFLIPLLDDKFPLI
RSITCWTLSRYSKFIVQSLDHPNGRGQFDKILMGVLRRILDTNKRVQEAACSAFAILEEE
ASEELVPHLEVILQHLMCAYRKYQRRNLRILYDALGTLADAVGAELNQAKYLDIFMPPLI
TKWQQLSNYDKDLFPLLECFTSIAQALGPGFAQFAEPVFQRCINLIHSQQLSKIDPTAAG
AVYDREFIVCSLDLLSGLAEGLGAGIESLVAQSNLRDLLLQCCMDEAADVRQSALALLGD
LSRVCPIHLHPRLQEFLTVAAKQLNPQSVKDAVSVANNACWAIGELAIKIGKEIAPVVIT
VVSCLVPILKSPEGSNKSLVENSAITLGRLSWVCPDIVAPHMEHFMQAWCKALCMIRDDF
EKEDSFHGLCAMVAANPTGGAGSLAYICQACASWTEIKSEGLHNEVCQILNGYKQLLGNG
GWEQCMATLQPDVVQKLARYGV

Transcript Sequence

Transcript ID

Zm00001d026696_T045
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:150183880:150199610:1 gene:Zm00001d026696 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transportin-1
Sequence

TCCTTCAGTTTTTCCAGTCACCACATGCAAGTTTGAGAAAACTATCATTGGGTATCATAA
ACCAGTACATAGTAGTGATGCCATCGGCACTCTACATGTCTATGGATCAGTATATTCAGG
GATTATTCAACCTTGCAAAGGACTCTTCAGCAGATGTTCGGAAACTGGTTTGTTCAGCCT
GGGTTCAGCTCATTGAAGTTCGCCCATCAATTTTGGAGCCACATCTTAAAAATGTTACTG
AATTGATTCTGCAAGCTAATAAAGATTCAGATGATGAAGTTGCTCTGGAAGCTTGTGAGT
TCTGGTCTGCATACTGTGATGTGAGCATGCCTCCTGAAGGTTTACAGGAGTTCTTGCCGC
ACTTAATCCCGACTTTGTTGTCGAACATGGTATATGCTGACGGCGATGAGTCCCTTGATG
ATGCTGAGGAAGATGAATCCTTTCCAGACAGGGACCAGGATTTGAAGCCCCGCTTCCATG
ATTCTCGATTGCATGGATCGGAAACTGGAGATGACGATGATGATGCTGATGCTGTAAATG
TCTGGAACCTGCGGAAGTGTAGTGCTGCTGGGTTGGATGTTCTCTCTAATGTGTTTGGTG
ACAGCATCCTTCCAACTTTAATGCCATTGATTGAGCAAAACTTGGCTCGAACAGATGATG
ATTCTTGGAAGGAGAGGGAAACTGCTGTTTTATGTCTAGGCGCTATAGCAGAGGGGTGCA
TTAGTGGTCTATACCCACACCTTCCTCAGATTGTTGCCTTTCTAATCCCACTTCTTGATG
ATAAATTTCCTCTTATACGGAGTATTACGTGTTGGACGCTCTCTCGATACAGCAAATTCA
TTGTTCAGAGCCTTGATCATCCAAATGGACGCGGACAATTTGATAAGATTCTTATGGGAG
TGCTCAGAAGGATATTGGATACTAACAAAAGAGTGCAAGAGGCTGCTTGTTCGGCGTTTG
CAATCCTTGAAGAGGAAGCTTCTGAAGAATTAGTACCCCATTTGGAAGTAATTTTGCAGC
ACCTCATGTGTGCCTATAGAAAATACCAGAGACGAAATCTCCGGATACTCTATGACGCCC
TCGGTACCCTGGCTGATGCTGTTGGAGCAGAATTAAATCAGGCAAAATATCTAGACATAT
TTATGCCGCCTTTAATCACAAAGTGGCAGCAACTTTCCAATTATGACAAAGATCTATTTC
CACTCCTTGAATGCTTTACATCTATCGCACAGGCATTGGGACCAGGATTTGCTCAGTTTG
CGGAACCAGTGTTTCAAAGGTGCATTAATCTTATCCATTCGCAACAGTTGTCAAAGATTG
ATCCTACTGCAGCTGGTGCGGTGTATGATAGAGAATTCATTGTTTGTTCGTTGGACCTAC
TATCAGGACTTGCAGAAGGTCTTGGCGCTGGTATTGAAAGTCTTGTTGCACAGAGCAATT
TGAGAGATCTACTTTTGCAATGCTGCATGGATGAAGCAGCTGATGTTCGACAAAGTGCCC
TTGCACTTCTTGGAGACCTTTCTAGGGTTTGCCCAATACATTTGCATCCACGCCTTCAAG
AATTTCTTACTGTTGCAGCGAAGCAACTGAACCCTCAATCTGTGAAGGATGCGGTATCAG
TAGCTAACAATGCTTGTTGGGCTATTGGAGAATTAGCAATCAAGATTGGCAAAGAAATAG
CGCCTGTGGTGATCACCGTTGTTTCGTGCTTGGTTCCCATTCTAAAATCCCCAGAGGGTT
CGAACAAGTCACTTGTTGAAAACAGCGCGATCACTCTTGGGAGGCTTAGCTGGGTGTGTC
CAGACATCGTGGCCCCTCATATGGAGCATTTCATGCAAGCATGGTGCAAGGCGTTGTGCA
TGATCAGAGATGATTTTGAGAAAGAGGACTCGTTTCATGGATTGTGTGCAATGGTGGCAG
CAAACCCTACAGGAGGCGCCGGTTCATTAGCTTACATCTGCCAGGCCTGTGCGAGTTGGA
CTGAGATAAAAAGTGAAGGTCTTCACAATGAGGTGTGCCAGATTCTGAATGGCTACAAGC
AGCTGCTTGGAAACGGTGGGTGGGAACAATGCATGGCCACCCTGCAACCGGATGTTGTGC
AGAAATTAGCTAGATACGGAGTATGATGGCAGTGGTCGTGTGGTTTCATCATCTTTTTAC
GCTGGAGACAGAGATCAGGATGGTTGGTTGGGTCACTTGCTCGTCCCTCCCGCCTCCCAG
TCCCAGGCAAGGCGACATTGATGAAAGAAAGGTTTTTGTAGCGTGTAATTCTTTTCTTCC
TCTTCCTCTTAGCAGGTGAGTCCAAAATTACATTACCAATTCATTTTTGCCCAATAATAA
AAGATGAAGATCCATGGGATTTGTTTATCCCCCACTCCCTTGTTTCTGTTACTAACCATC
TTCGGCAGCCTATTCATACCCTTGTTTGTAGTACAATCTACAATACAAAACGGTGACATT
TTTAGAGACCATAGATATGGGTGAACTAGAACTACTACTATACACTGTGGTCGGTCACCG
TTTGTTTTGCACTGTAGATTGTACTGTTTGTAAAGTGTAGATTAGATATAGACTAGTCAT
ATGCCCGTACATTGCTACGGTTTTTATATATAACATAGAATAGATCTCTATTATATTAAA
GGATCAGTTTCAATGGTCGTTTTGCGTCAATATTTTTTTAAAAAAACATCTATATTTCTT
TAGAATCAACCTGCACTCCTATAATATCTTCTCTACTACTATAATATGAGAGTTTATATA
AAAAATAAGGTGAAATCATGTATAAGTTAGTGTTTGAACCTTGTTGGCTCTACATTCACA
CCCACATAATCAATAACATATATTTTATGTTTTATTAAAATAAAATTTATTCTATGTTAT
ATATAAAAACCGTAGCAATGCACGGCCATATAACTAGTCCATATTTAATCTACACTCTTA
AGGTGTTTTTTTGAAAAATATTGATGAAACCACACGACCAAGGTATACCAGTTGGTTGTC
CGTGCATTACCACGGCTCACAATAATATCCACGTAAACTATCCACCAAAAAGATCCTAAG
ATTTTTTTATTGATTGTCTCTACTCTCCGCATAATATTTTTTTATTTGACTAATTAATAT
TGTTTACTTCATCCAATATGTCTTGGTACAACACAGCCAATAAAAGGATCGATTATAATA
GAGTTCACAACGATTGACTGAATGTATGGAGATTATATAATGACATAATTTTACCATACA
GAGACAAAAGAAGTTTGTAAGCTCTAGTTTCTAAAATAAGTCGGTTGGCTCGCGACTGTG
ACCGTGGGCGATGGCGGTAGGTTGGGGAGGAAGAACAAGGCGAAGGCCGAGAAGACGAAT
GAGACATCCGACGATGGCGAAGGCCGAGAAGACGAACGGGACGTCCGATGATGGTGCGCG
CATGCTGTGAAACGTCCTCGTGGACGTGCAATAGCCACTGCGCGGGTCGGTGTCGGGGCT
GGTGTCGGACAAATACGGGGAGGAGGCGTCTGCTTCCACACCCTCTGCCGAGAATGGAGT
GGTGCGGAAGCGGAGGCATGAGGGGAGAGAGAAAAGAAGCAGGATGACGAACGAGGTGGC
GGCTAGGGATGAAAACGGTCGAAAACGATCGGTAGAAGGCTAAACCATTTTCACTTTCAT
TTTTTTCCCGAAAACGGTAACGATACGATATTGTCGAAAATGATAACGGCGTCGATATAT
CGATAATTTCGAAAGCGAGACTATTCGATCGAAAGCACATCGATTACGGTCGAAAATTAT
CAAATCGATATTTCAAAAATGAAAAACATATCAAACTATATAACTTCGCTAATAGCATAA
TATTATGATAGATATCATACATAAAGATAGAGATGACTACCTTCCTTGACACATACATCA
TAGTGGCATACACTAATAGACACATAGTCACTCACATTATAATATAACA