Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d026691_T013
CDS Infomation	cds chromosome:B73_RefGen_v4:10:150052093:150060857:-1 gene:Zm00001d026691 gene_biotype:protein_coding transcript_biotype:protein_coding description:DDB1- and CUL4-associated factor homolog 1
Sequence	ATGGCGGAGTCGGAGAAGGGCGCCGCCGCAACCACCACCGCCGCCGCCGAGCCTGGGTCC GGCCCGCCGCACGAGGACGAGGATGCGCTGCTCGCCCGTGCCCACACTGTCATCTCCAGG ATCCTCGACCGCGAGCTCGACCCCAACCCTCGCCTCCTCCACACCCTCGCCACCATGTGC GAGCTCCACGAAGCCAGATATCTTGAGTTACGTGCAGCTGACCCAACGTTCAATAACACG AACACAAGGAGCACATTTACAATTGGGAAGCTGGCCAATTTGCTCCGGGACAATGACGAG TTTTATGAGTTGGTGTTTTGTAAATTCTTGTCCGACACCTCCTACTCTGTTGCTGTACAA GCCGCTGCTGCTAGGCTGCTCTTGAGCTGTCACTCTGCCTGGACGCCTCCGTATCCTCAT GTCTTTGAAGACTCTATCATAGATAATATTAAAAAGTGGGTAATGAAGGATCCTGAAGCA TCTAATGAATGTGAGTGGAAGTATCTAGGAAAAAATAAACCCACAGATGCTGAGATGCTG AGAACATATGCGATTGGGTTGCTTGCTATGGCATTGTGCAGTGGTGGGCAATTGGTAGAG GATGTCTTGACTTTGGGGGTGCCAGCAAAGCTCATGCACTTTCTGCGCATAAGAGTCCTT GGTGATGCCTCATCTTCTCAAAGAGATGCTAATCATCCACAAGACACCAAATATCCTCGA GGCAGAGACGATAATAGGGGTAAATCACGTCTGGCCCAAGATGGTTCTCGGTTGGATGGA ACAAGGGTTGGGTATGGAATATTGACCAACCCAACAGCAGAGAAGGACAATGAACCTGGT GTTGTAATGAGGCAAGCATATGGAGAAAGGTCATTGGATGGCACTTTTGCCTCATCAGAT AATTCTGACGTCCCTGAGGTTGATTGGACCAATGATAACTCTTATGGCACAATTGTTTGT GACACAAAGTCAAAATATGGGGAAAAGACTTCTGTGACAAGGGCTCTTAAAGATGAAGAG ATCAGCGAAAATGGTGAACTGTTGAAGAGAAAGCTGAGTCGAGCCCCCTCTCGACTTAGA GTGAAGGGAAAAGCAGGAGACAACTTGCCTGAATGTGAAATGACACCTTTATCACCAACC TCTGGATTGAGAATCGGAGGTCGGGCTTCCAGAGACAGGAATGTGGTGAGGGTTGATGAC CCAAAGAAGGCAACTGATGTGAACAATAGTTCTGCAGGCCTCGAGTTGTTTAGCGCTATT TCCAAAGAAGAATATGAAGATCGTTTGAGGGATTGCATTATTGGCTTGAAGGATATATCT GACATCGTTTTGAAGGCAGTGAGAGCTGCTGAGGCTGAGGCCAGATCTGCAAATGCACCT GATGAAGCTGTGAAAGCAGCAGGTGATGCTGCTGCCGAGCTTGTGAAATCTGCTGCTTTG GAGGTTTGGAAAGCCGAAAATAATAGTGATGCGGTTATAGTAGCGGCAGAGAAAGCTGCA TCTGCAGTTGTAGAGGCTGCAGTGTCGACTAGTGTCTCACGAAGCACAAATCAAGTTGGT GAAGAACGTGCAGCGGAAGAAGCTGTACAAACCAGCGAAGACCAGGATTTGGAAAATTTT GTTATCAGTGACAAATCACAGCTCTTACAACTTAGAGAAAAATATAGCATCCAGTGTCTA CAGATTTTGGGAGAGTATGTTGAAGCTTTGGGTCCTGTTCTCCATGAAAAAGGTGTTGAT GTTTGCCTCACATTATTGCAAATGAGCATGAAAGACCAGGAGGGATGTGACCACTTTGCT CAACTCCCTGATGTTCTTAAATTAATTTGTGCATTGGCTGCCCATCGAAAATTTGCTGCA CTCTTTGTTGATCGTGGTGGTATACAGAAGATCCTCTCTATTCCTAGAATTACCCAGACA TATATGGGTCTTTCTGCCTGCTTATTCACTTTCGGGTCTCTTCAGTCTACCATGGAACGT GTTTGTGCGCTCTCCTCTGACACACTTGACAGTGTTGTTGAATTAGCACTTCAACTTCTT GAGTGCCCACAAGATTTAGCTAGAAAAAATGTGGGCATCTTTTTCGCTGCTGCTTTTGTG TTCAAAGCTGTTCTTGATCTATTTGATGCACGAGATGGGATGCAAAAGCTTCTCGATATC CTATATGGTTGCGCATCTGGAAGATCTGGCAGTAATTCTGGAGGAGCAGGATCCTCCAAT GTAAATCAAGGGAATGATCGGTCACCTGCTGAAGCTTTGACTGCATCAGAGAAGCAAGTT GCATACCATACTTGTGTTGCTCTACGGCAATACTTTAGAGCTCATCTCCTTCAGCTTGTT GACTCCATTCGGCCAAGCAAAAGCATCCGCAGTATTGCTCGGAACACTTCTAGTGCACGA GCTGGCTACAAACCTTTTGACATTAGCAATGAAGCTATGGATGCTGTCTTTCGTCAGATC CAGCGGGACAGAAAGTTAGGCCTTGCTCTTGTGAGAGTTCGTTGGCCTGTGTTAGACAAA TTTTTTGCCTCAAATGGTCACGTGACTATGCTGGAGTTGTGTAAGTTTCAGGCACATGGT GATCGCTATTTGCGTGATTTAACTCAATATGCAATTGGAGTTCTTCACATCATAACACTT ATGCCACAACCACATGTCCGCAAATCAATAGTGCAGGGAACATTAAGCAACAATCGTGCT GGTATGGCTGTCTTATTAGACACGGTGAAAAGTTTTGACTACATTGATCATGAGGTGATC TGTCCAGCACTGAATGTCCTCGTCAATCTTGTATGCCCGCCTCCTTCTATCAGCAACAAA CCATTGTCAACTGCCAATCAGCAACCTGCAGCCGCGCAAGCACTTGCTTCAGAAAGCAGA GATAGGAACTTCGAAAAAAGTATTTCAGATAGGAATCTACTAGCAAATCAGGGTGAATAT CGTGAAAGATCTGGTGATGGCAACCCTGCTGAAAGGAACAATACCTTGCATCAAGGAACT CCTAACACACCTGTTGTGACATCTGGAGTAGTCGGTGATCGAAGAATAACATTAGGTGTT GGAGGTGGTGGTCCTGGTCTTGCTGCTCAATTGGAGCAAGGATACCGTCAAGCTCGAGAA GTTGTAAGAGCCAATAATGGCATAAAAATTCTTTTACAGCTTCTCGGTTCTCGGATGGTT ACACATCCTGTGGCTATAGATTCTATTCGAGCGCTTGCCTGCCGTGTCCTGCTTGGCCTG GCTAGAGATGATACAATTGCACATATACTGACCAAGCTCCAGGTGGGGAAGAAATTATCA GAACTGATCCGTGATACCAGTGCCCAGACATCTGCGGGCGATAGTGGAAGATGGCAAGCT GAGCTGACCCAAGTGGCAATTGAACTAATTGCGGTAAGCACTTTCATATTATGTGATTAT AGGTAA

Peptide Sequence

PEP ID	Zm00001d026691_P013
PEP Infomation	pep chromosome:B73_RefGen_v4:10:150052093:150060857:-1 gene:Zm00001d026691 transcript:Zm00001d026691_T013 gene_biotype:protein_coding transcript_biotype:protein_coding description:DDB1- and CUL4-associated factor homolog 1
Sequence	MAESEKGAAATTTAAAEPGSGPPHEDEDALLARAHTVISRILDRELDPNPRLLHTLATMC ELHEARYLELRAADPTFNNTNTRSTFTIGKLANLLRDNDEFYELVFCKFLSDTSYSVAVQ AAAARLLLSCHSAWTPPYPHVFEDSIIDNIKKWVMKDPEASNECEWKYLGKNKPTDAEML RTYAIGLLAMALCSGGQLVEDVLTLGVPAKLMHFLRIRVLGDASSSQRDANHPQDTKYPR GRDDNRGKSRLAQDGSRLDGTRVGYGILTNPTAEKDNEPGVVMRQAYGERSLDGTFASSD NSDVPEVDWTNDNSYGTIVCDTKSKYGEKTSVTRALKDEEISENGELLKRKLSRAPSRLR VKGKAGDNLPECEMTPLSPTSGLRIGGRASRDRNVVRVDDPKKATDVNNSSAGLELFSAI SKEEYEDRLRDCIIGLKDISDIVLKAVRAAEAEARSANAPDEAVKAAGDAAAELVKSAAL EVWKAENNSDAVIVAAEKAASAVVEAAVSTSVSRSTNQVGEERAAEEAVQTSEDQDLENF VISDKSQLLQLREKYSIQCLQILGEYVEALGPVLHEKGVDVCLTLLQMSMKDQEGCDHFA QLPDVLKLICALAAHRKFAALFVDRGGIQKILSIPRITQTYMGLSACLFTFGSLQSTMER VCALSSDTLDSVVELALQLLECPQDLARKNVGIFFAAAFVFKAVLDLFDARDGMQKLLDI LYGCASGRSGSNSGGAGSSNVNQGNDRSPAEALTASEKQVAYHTCVALRQYFRAHLLQLV DSIRPSKSIRSIARNTSSARAGYKPFDISNEAMDAVFRQIQRDRKLGLALVRVRWPVLDK FFASNGHVTMLELCKFQAHGDRYLRDLTQYAIGVLHIITLMPQPHVRKSIVQGTLSNNRA GMAVLLDTVKSFDYIDHEVICPALNVLVNLVCPPPSISNKPLSTANQQPAAAQALASESR DRNFEKSISDRNLLANQGEYRERSGDGNPAERNNTLHQGTPNTPVVTSGVVGDRRITLGV GGGGPGLAAQLEQGYRQAREVVRANNGIKILLQLLGSRMVTHPVAIDSIRALACRVLLGL ARDDTIAHILTKLQVGKKLSELIRDTSAQTSAGDSGRWQAELTQVAIELIAVSTFILCDY R

Transcript Sequence

Transcript ID	Zm00001d026691_T013
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:150052093:150060857:-1 gene:Zm00001d026691 gene_biotype:protein_coding transcript_biotype:protein_coding description:DDB1- and CUL4-associated factor homolog 1
Sequence	CGAGGGGAGAGTTTGGGACTCGCTGCCCCTCTTCGCTTCCCACCAACCTCCTCTTCTCCG TCGATTCCATTCGATTCGAATTCGCGATCGCCCACCACCGCACCAAGCGCCAAACCCTGA CCCTGATCCTAATCCTGTGCGCCACAATGGCGGAGTCGGAGAAGGGCGCCGCCGCAACCA CCACCGCCGCCGCCGAGCCTGGGTCCGGCCCGCCGCACGAGGACGAGGATGCGCTGCTCG CCCGTGCCCACACTGTCATCTCCAGGATCCTCGACCGCGAGCTCGACCCCAACCCTCGCC TCCTCCACACCCTCGCCACCATGTGCGAGCTCCACGAAGCCAGATATCTTGAGTTACGTG CAGCTGACCCAACGTTCAATAACACGAACACAAGGAGCACATTTACAATTGGGAAGCTGG CCAATTTGCTCCGGGACAATGACGAGTTTTATGAGTTGGTGTTTTGTAAATTCTTGTCCG ACACCTCCTACTCTGTTGCTGTACAAGCCGCTGCTGCTAGGCTGCTCTTGAGCTGTCACT CTGCCTGGACGCCTCCGTATCCTCATGTCTTTGAAGACTCTATCATAGATAATATTAAAA AGTGGGTAATGAAGGATCCTGAAGCATCTAATGAATGTGAGTGGAAGTATCTAGGAAAAA ATAAACCCACAGATGCTGAGATGCTGAGAACATATGCGATTGGGTTGCTTGCTATGGCAT TGTGCAGTGGTGGGCAATTGGTAGAGGATGTCTTGACTTTGGGGGTGCCAGCAAAGCTCA TGCACTTTCTGCGCATAAGAGTCCTTGGTGATGCCTCATCTTCTCAAAGAGATGCTAATC ATCCACAAGACACCAAATATCCTCGAGGCAGAGACGATAATAGGGGTAAATCACGTCTGG CCCAAGATGGTTCTCGGTTGGATGGAACAAGGGTTGGGTATGGAATATTGACCAACCCAA CAGCAGAGAAGGACAATGAACCTGGTGTTGTAATGAGGCAAGCATATGGAGAAAGGTCAT TGGATGGCACTTTTGCCTCATCAGATAATTCTGACGTCCCTGAGGTTGATTGGACCAATG ATAACTCTTATGGCACAATTGTTTGTGACACAAAGTCAAAATATGGGGAAAAGACTTCTG TGACAAGGGCTCTTAAAGATGAAGAGATCAGCGAAAATGGTGAACTGTTGAAGAGAAAGC TGAGTCGAGCCCCCTCTCGACTTAGAGTGAAGGGAAAAGCAGGAGACAACTTGCCTGAAT GTGAAATGACACCTTTATCACCAACCTCTGGATTGAGAATCGGAGGTCGGGCTTCCAGAG ACAGGAATGTGGTGAGGGTTGATGACCCAAAGAAGGCAACTGATGTGAACAATAGTTCTG CAGGCCTCGAGTTGTTTAGCGCTATTTCCAAAGAAGAATATGAAGATCGTTTGAGGGATT GCATTATTGGCTTGAAGGATATATCTGACATCGTTTTGAAGGCAGTGAGAGCTGCTGAGG CTGAGGCCAGATCTGCAAATGCACCTGATGAAGCTGTGAAAGCAGCAGGTGATGCTGCTG CCGAGCTTGTGAAATCTGCTGCTTTGGAGGTTTGGAAAGCCGAAAATAATAGTGATGCGG TTATAGTAGCGGCAGAGAAAGCTGCATCTGCAGTTGTAGAGGCTGCAGTGTCGACTAGTG TCTCACGAAGCACAAATCAAGTTGGTGAAGAACGTGCAGCGGAAGAAGCTGTACAAACCA GCGAAGACCAGGATTTGGAAAATTTTGTTATCAGTGACAAATCACAGCTCTTACAACTTA GAGAAAAATATAGCATCCAGTGTCTACAGATTTTGGGAGAGTATGTTGAAGCTTTGGGTC CTGTTCTCCATGAAAAAGGTGTTGATGTTTGCCTCACATTATTGCAAATGAGCATGAAAG ACCAGGAGGGATGTGACCACTTTGCTCAACTCCCTGATGTTCTTAAATTAATTTGTGCAT TGGCTGCCCATCGAAAATTTGCTGCACTCTTTGTTGATCGTGGTGGTATACAGAAGATCC TCTCTATTCCTAGAATTACCCAGACATATATGGGTCTTTCTGCCTGCTTATTCACTTTCG GGTCTCTTCAGTCTACCATGGAACGTGTTTGTGCGCTCTCCTCTGACACACTTGACAGTG TTGTTGAATTAGCACTTCAACTTCTTGAGTGCCCACAAGATTTAGCTAGAAAAAATGTGG GCATCTTTTTCGCTGCTGCTTTTGTGTTCAAAGCTGTTCTTGATCTATTTGATGCACGAG ATGGGATGCAAAAGCTTCTCGATATCCTATATGGTTGCGCATCTGGAAGATCTGGCAGTA ATTCTGGAGGAGCAGGATCCTCCAATGTAAATCAAGGGAATGATCGGTCACCTGCTGAAG CTTTGACTGCATCAGAGAAGCAAGTTGCATACCATACTTGTGTTGCTCTACGGCAATACT TTAGAGCTCATCTCCTTCAGCTTGTTGACTCCATTCGGCCAAGCAAAAGCATCCGCAGTA TTGCTCGGAACACTTCTAGTGCACGAGCTGGCTACAAACCTTTTGACATTAGCAATGAAG CTATGGATGCTGTCTTTCGTCAGATCCAGCGGGACAGAAAGTTAGGCCTTGCTCTTGTGA GAGTTCGTTGGCCTGTGTTAGACAAATTTTTTGCCTCAAATGGTCACGTGACTATGCTGG AGTTGTGTAAGTTTCAGGCACATGGTGATCGCTATTTGCGTGATTTAACTCAATATGCAA TTGGAGTTCTTCACATCATAACACTTATGCCACAACCACATGTCCGCAAATCAATAGTGC AGGGAACATTAAGCAACAATCGTGCTGGTATGGCTGTCTTATTAGACACGGTGAAAAGTT TTGACTACATTGATCATGAGGTGATCTGTCCAGCACTGAATGTCCTCGTCAATCTTGTAT GCCCGCCTCCTTCTATCAGCAACAAACCATTGTCAACTGCCAATCAGCAACCTGCAGCCG CGCAAGCACTTGCTTCAGAAAGCAGAGATAGGAACTTCGAAAAAAGTATTTCAGATAGGA ATCTACTAGCAAATCAGGGTGAATATCGTGAAAGATCTGGTGATGGCAACCCTGCTGAAA GGAACAATACCTTGCATCAAGGAACTCCTAACACACCTGTTGTGACATCTGGAGTAGTCG GTGATCGAAGAATAACATTAGGTGTTGGAGGTGGTGGTCCTGGTCTTGCTGCTCAATTGG AGCAAGGATACCGTCAAGCTCGAGAAGTTGTAAGAGCCAATAATGGCATAAAAATTCTTT TACAGCTTCTCGGTTCTCGGATGGTTACACATCCTGTGGCTATAGATTCTATTCGAGCGC TTGCCTGCCGTGTCCTGCTTGGCCTGGCTAGAGATGATACAATTGCACATATACTGACCA AGCTCCAGGTGGGGAAGAAATTATCAGAACTGATCCGTGATACCAGTGCCCAGACATCTG CGGGCGATAGTGGAAGATGGCAAGCTGAGCTGACCCAAGTGGCAATTGAACTAATTGCGG TAAGCACTTTCATATTATGTGATTATAGGTAATAATTTTGAAGATTCAACCCTCTAAACA GGCCATGTTGGTTAGATGCGTCCTATGTTCACATGATTCTTTGGCAGGTATTGACAAATT CTGGAAAAGAAACAACATTAGCAGCAACTGATGCTGCTGCTCCAGCATTGAGGCGCATCG AGCGAGCTGGGATAGCTGCTGCTACTCCTATCTCCTACCACTCAAGGGAACTGATGCAGT TGATACATGAACATCTTCTTGGGTCTGGTTTCACTGCCACTGCTGCCATGCTGCAGAAGG AGGCTGGCCTTGCACCTTTACCATTGATAGCAGCGGTGCTTCCTGCCCACCAAGTTGCTG CCCTGGAAGCATCATCTGTTCAGCAACAGTGGCCCTCTGGACGTGTTCAGGGATTTCTCT CAGATAAAATAAATATGTCGACAGATCAATCTGCCCATAGATCAGATTCTATCCCGCCTT CATCTAAGAAAAAAGCACTGACCTTCTCATCCAGTTTCTCACGAAGAGCTCAGACTCCAC ATTCTGTTTCTGGCAGCAGAACAAGCAACATCCTTAAAAGTCCTGTACCTATTGCGGCTG ATACTAGAGATGCAGAAATGTTGAATAAGACACCACTGTCGCTGCCACTTAAGAGGAAGC TTGTGGATGTGAAGGATAATAATTCTGTATCAGCAACGAAGCGCCTCGCAACAACTGATC AAACGTACCAACCCTCTGTATTCCAAACTCCTGCTCCTACTCGCAAAGGTCTGTCAGTAG CAGTAGATTCTCCTACTTCATTTCATTGTGGCCGGACAAACTTCAACTATGTTTCTACTG AAAACTTGGACAATTCTCAAAGCACACCAGGAACGTTGATCACCACAACACTTCCTGGTG TGAATGATCAACAATCAGGAAATTTGGAACGTATGACACTTGACTCACTGGTTGTACAAT ACTTGAAACATCAACACCGCCAGTGTCCTGCTCCAGTTACAACTTTGCCACCACTTTCTC TTTTGCACCCTCATGTTTGCCCTGAGCCTAGTCGCAGCCTTAGTGCACCTGCAAACATAG CTGCTCGTATGGGTAGCCGTGAGATAAGAAGGCAGTTTAGTGGGATCCAGATACCTCGTA GGGATCGTCATTTTATATACAGTAGGTTCAAGCAGTGTCGGGTTTGCCGTGATGAGGCAT CACTATTGACTTGCATGACATTTCTTGGAGATGCATCTCGAGTTGTGGCTGGTAACCACA CAGGTGAATTAAGGATATTTGACTGCAACACGGCAAATCTCCTAGAGACCCAAACATGCC ACCTACATCTTGTTACAACGATGGAGGCGACATGTTCTGGTGGACACGAGCTTATTCTCA CATCCAGCCTAAATGAGGTTAAGATCTGGGATGCCTTCTCGGTATCTGCAGGGCCTTTGC ACACATTTGAGGCCTGCAAAGCTGCTAGGTTTAACCACTCTGGAACTTCATTTGCTGCCC TTTCTACTGATACAGCTCAACGGGAGGTTCAGTTGTATGATGTGCAGACATATACTCTTG CTACACAGCTTCCTGATAACACTAGCAGTTCAGGTTCGGGCCGGGGTTACATACAACCCA TTATACATTTCAGTCCTTCAGACACAATGTTGCTTTGGAATGGAGTCCTGTGGGATACAA GGCAGCCAAATTTTGTACATCAGTTTGACCAGTTCACAGATTACTGTGGTGGTGGCTTCC ATCCGGCAGGAAACGAGGTGATCTTAAATTCGGAGGTGTGGGATCTGAGGAAGTTCAAGC TTTTACGGAGTGTCCCTTCCCTGGACCAGACAGTAATAAAGTTCAACGGCACTGGTGATG TTATCTATGCCATCCTGAGGCGTAATCTTGATGACGTGACATCATCCATCAATGCTCGGA GGGTCAGGCATCCTCTTTTCCCTGCATTCCGCACGATTGATGCGGTGACTTACTCGGATA TTGCAACCGTCCAAATCGACCGCTGCGTACTTGATCTTGCCACTGAGCCCAATGATTCTC TTATTGGGGTGGTTGCTATGGACGATCACCAGGAGCTTTTCTCTTCTGCCCGCTTGTTCG AAGTTGGCAGGAAGCGAATAACCGATGACGATTCAGACCCGGAGGATGCAGGTGAAACCG ACGATGACGACGACGACGATGGCGACTCTGATGATGATGTTCTCCTTGCGCCGGTGCTGG AAGGGGATACAGATTCCGAAGAGATTAGTAGCAGCAGCGATGATGGTGATGAAGATGGTG GTGACGATGATATCCCCAGTTCGGATGACATTGAAGATGACCCAGAGTACATTGATGGTG GTGGTGATTTTGAAGGGGGAGGGGGCTTGATGGATATTTTGGGTGATGACGAAGGGGAAG GCGATGAGAGTGATATGATGGAATCCTTTAGCAGTGGCGACGAGGAGGGTTGGATCATGT AGTTTTTTTTTGGGTAGTGCAGCCCTGCCGAAGATGGAGCATGGCCCTGTACAAGTCAAT ATTTATACGCTCACATTATGATTGTAATTATTATTTCCTGG