Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d026677_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:10:149751438:149757930:-1 gene:Zm00001d026677 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy1t description:Serine/threonine-protein kinase STY46
Sequence	ATGGAGGACGATGACACCGAGGGTGTAGGCGAGAGCACCTGTCCCCCCGCCGCCGACCGA GGAGGCTCCTCCTCGGCCGGCGGCGGCGGCGGCGACTCGCACAGTTACACTGACATAGAG AAGGAGGTCTTCGACCGTCTCATGGAGAAGAGAATCCCGGAGGTCGTCGCGGACCCGGTG GCCTTCCGCGAAGAGCTCCGCCGCCACTTCGAGCGCCTGCCGCTGAGCTACGCCGTCGAT GTGAACGTCGACAAGGCGGAGGACGTGCTGCTGCACCGGAGGATTCTCAACGAGTGCGCT CACCCTGAAAATCGCCCCATCTTCCATGTGGGCTTCCTGAACTGCATCCCGCCCTCGGTG GATCCACAGTATAACACTCAGTCCATCTCTACGAGCGAAAACGGTAATTGTGGGGGTTCT CAGGATTCCACTTTGAGAAAATTTGAGCCATGCGAAGGGATCGAGGACCTCAGTTTAACT GGACAAAAAGTTGTGGTTGACTCTGTGGCCAGTTCTTCGAGGGGAGATGAAGAAATCCTC CATGTTCATGAAATTATTTTTTCTACCATTGACAAACCAAAGCTCCTCGCTCAGCTATCT GCTTTGTTGTCTGAAGTTGGACTGAACATCCGTGAAGCTCATGTCTTCTCAACGACTGAT GGCTTTTGTTTGGATGTATTTGTTGTTGATGGCTGGGATACAAAGGAGACAGATACTTTG CTACAGATTCTCAAGGAGACAGCGGCACGAAATCATGCCTCATTATCAAACCCAACCAAT TCTGCAGCCTCAGAAAGAGTACTGGAACTACAAGAGAAGATTGGTGATTCAAATATTGAC AGGAATTTTCTGCAGATTGGGGAGAAGATTGCATCTGGATCTTCCGGGGACTTGCATCGA GGAACTTATCAAGGTATGGATGTTGCAGTAAAGTTCCTCAGAACCGAACATGTTAATGAC TCGTCAAAGGTGGAGTTTTTACAAGAAATAATTATTCTAAAGAGTGTTAATCATGATAAT GTTGTTCGATTCTACGGGGCATGCACAAAGCAGAGAAAATATGTCATCGTGACAGGTGAC GGTATTATCACCGCTAATCTTAATTTCTGCTTTGTGTAG

Peptide Sequence

PEP ID	Zm00001d026677_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:10:149751438:149757930:-1 gene:Zm00001d026677 transcript:Zm00001d026677_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy1t description:Serine/threonine-protein kinase STY46
Sequence	MEDDDTEGVGESTCPPAADRGGSSSAGGGGGDSHSYTDIEKEVFDRLMEKRIPEVVADPV AFREELRRHFERLPLSYAVDVNVDKAEDVLLHRRILNECAHPENRPIFHVGFLNCIPPSV DPQYNTQSISTSENGNCGGSQDSTLRKFEPCEGIEDLSLTGQKVVVDSVASSSRGDEEIL HVHEIIFSTIDKPKLLAQLSALLSEVGLNIREAHVFSTTDGFCLDVFVVDGWDTKETDTL LQILKETAARNHASLSNPTNSAASERVLELQEKIGDSNIDRNFLQIGEKIASGSSGDLHR GTYQGMDVAVKFLRTEHVNDSSKVEFLQEIIILKSVNHDNVVRFYGACTKQRKYVIVTGD GIITANLNFCFV

Transcript Sequence

Transcript ID	Zm00001d026677_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:149751438:149757930:-1 gene:Zm00001d026677 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy1t description:Serine/threonine-protein kinase STY46
Sequence	TCTGCCAAAAGATCCTCTCGGATGCCCCCGCCCCCGCCCACCCATTTCGCCAGTCGCCAT CGAGCTCTCGCTTCCGCCGCCCGCTGCCGCTCTATCACCCCGGTGCTGAGCCCTAGGATG TGACTGGCGGACGTCTCTATGGCCGAGCCGTAGGTGGAGGCGGCACCTCGGCGCCGTGGG AGATGGAGGACGATGACACCGAGGGTGTAGGCGAGAGCACCTGTCCCCCCGCCGCCGACC GAGGAGGCTCCTCCTCGGCCGGCGGCGGCGGCGGCGACTCGCACAGTTACACTGACATAG AGAAGGAGGTCTTCGACCGTCTCATGGAGAAGAGAATCCCGGAGGTCGTCGCGGACCCGG TGGCCTTCCGCGAAGAGCTCCGCCGCCACTTCGAGCGCCTGCCGCTGAGCTACGCCGTCG ATGTGAACGTCGACAAGGCGGAGGACGTGCTGCTGCACCGGAGGATTCTCAACGAGTGCG CTCACCCTGAAAATCGCCCCATCTTCCATGTGGGCTTCCTGAACTGCATCCCGCCCTCGG TGGATCCACAGTATAACACTCAGTCCATCTCTACGAGCGAAAACGGTAATTGTGGGGGTT CTCAGGATTCCACTTTGAGAAAATTTGAGCCATGCGAAGGGATCGAGGACCTCAGTTTAA CTGGACAAAAAGTTGTGGTTGACTCTGTGGCCAGTTCTTCGAGGGGAGATGAAGAAATCC TCCATGTTCATGAAATTATTTTTTCTACCATTGACAAACCAAAGCTCCTCGCTCAGCTAT CTGCTTTGTTGTCTGAAGTTGGACTGAACATCCGTGAAGCTCATGTCTTCTCAACGACTG ATGGCTTTTGTTTGGATGTATTTGTTGTTGATGGCTGGGATACAAAGGAGACAGATACTT TGCTACAGATTCTCAAGGAGACAGCGGCACGAAATCATGCCTCATTATCAAACCCAACCA ATTCTGCAGCCTCAGAAAGAGTACTGGAACTACAAGAGAAGATTGGTGATTCAAATATTG ACAGGAATTTTCTGCAGATTGGGGAGAAGATTGCATCTGGATCTTCCGGGGACTTGCATC GAGGAACTTATCAAGGTATGGATGTTGCAGTAAAGTTCCTCAGAACCGAACATGTTAATG ACTCGTCAAAGGTGGAGTTTTTACAAGAAATAATTATTCTAAAGAGTGTTAATCATGATA ATGTTGTTCGATTCTACGGGGCATGCACAAAGCAGAGAAAATATGTCATCGTGACAGGTG ACGGTATTATCACCGCTAATCTTAATTTCTGCTTTGTGTAGATATTAGTGTCACTGATGC TCTTGTTCTTGGGCATATTTGCAGAATGAGTAATGTTAGTGGCTTATTAATGCACATTCT TAGGTTCTAACCAACAACGTGCTTGACCATTTATCTTAGTTGAGGTTGACAAATAATCGT GATCTTTATCCCCTCTTTTGAATGGTGTTCTCGCTTCAAACTTCTATATTTCCGTTATGC GATTCAAAAACATGTTTGACCATCACTGTCGGTTTGTTTAGCCTTAGGGATGACTCCTGT CTCCTGTCAATTTGGTAGGAACTTGGAGAGTTAAAGACAATAGGATGTTTGGGTTTATTA TATTTTTCTTATCACATGAGCGTATATGGAATGTCTGCTCCATGCCAAAACATAGTACAA AAATTGCGCTGTAAGATTATTCTTGATGTCTTGTTCTATCGGATCAACAGGTCTCTGCCC CAAGTGCCCACCCTTCAGCAGACCATGAGTTGCTAGTTATTTTATGTATGTGAAATAAGT CTTGTTATTAGATTTTATTATTAGTTTGACTATTTATGGAGGGAAGTTTTGTGAATTTAA ATTTTATGTTTGTGCTACAGCTTGAATGTCACCTAACAACAGTCCCTTTGTTAATGGTGG ACTCAGGCTGCCTTTTCTTTAATGAAATGGATCTATTATATTGATACTGAACTTGACTTT ATGATATGTATTGTTGGGCTGTTTTTAACTTGAGATTAGAGTTTTTTTTGCTTTTAACTT GGTTGATTAGCAGTAGAAAAAAACGATTCCATTTTTATTTTGCAGTAGATAGACGTTGTC TATTTCCTTTTTTTGGCTATATTACAAATGGAAACTCACACTACTGAATTTATCTATTGT TTACATTCTCATATATGAATTGCCATGTGATATTTGTCTTTTCTATATGTTTCAAGTAGC CTGGTCCTGGATGATGATAAGAAATATGAGTGAGGAACAGTTTAGTCATTTGTATTGCTA CTTCTCTGTTCCTGTATCATCCTATCATGCTAGTGTAGGTAGCAATTGTTCTTTGACACA GTTGCTATTTATACTAGAAATTTAGTGACATCTTGGAATCATTTTAAAAAACTTCTAGGC ATTAGTAGATGAAACTTGTATGAAGCCAGTTACCTAACTAAATTTCATTTCTTGTTGAAC ATACACATCATTCCTGTGATTTGTATATGCCAACTCCAAGTGATTTTGCCACCGTCATGA TTTTAATCCCAAAGAAGCCACTGTGGCCTGATTTATGTGCTTACATATCTAGTTTTTGAG CTAGTCACATAGTTGAATGTAGTTTCGTCTGCCCAGAGTTTTGTTCAGATGATCACTTAT CATGAGCTGATTCATGAGATCATATTTTGATTTTGCTTTTGGTTGTCGTTTTCAGAGTAT ATGCCTGGAGGCAATCTGTATGATTTTCTTCACACGCTAAAAAATACTTTGGATCTCCCA ACGGTTCTCAGGATTGCTATCGGCATCTCCAAGGGGATGGATTATTTGCACCAAAATAAC ATCATCCATCGGGACTTGAAGACTGCCAATTTGCTTATGGGCTCTGATTATGTTGTGAAG ATTGCAGACTTTGGAGTCTCAAGGAATCCATCTCAAGGTGGAGACATGACTGCTGAAACT GGTACCTACAGATGGATGGCACCTGAGGTAATAAACCATAAGCCGTACGATCACAGGGCA GATATCTTCAGCTTTGCTGTGGTTCTGTGGGAGCTGGTCACTTCAAAGATACCATACAGA AATCTGACACCCTTGCAAGCTGCACTGGGAGTAAGGCAGGGAATGCGGTTGGAGATCCCG TCATGGGTCAATCCACAACTGTCTAAACTGATTCAGCGTTGCTGGGACGAAAATCCTAAC CTGCGCCCCTCTTTCTCAGAGATCACTGCAGAGCTGGAAGGCATGTTAAGGGATCATCAG GCCTCCAAGGGAAGCAACAAACATTCGAAGGCAAAGGCACACAAAAAATCGCAGAGAGAG GCAGAATAACGAGGTTGTCAGTTACCACCTTGTGAAAAGCTTAGTGGAGCTTGGCTATCA TCGTCCAAGATTCTGAGGCTACTACAAAGATGCTGCTAGTGTACAATTGTCAAATATTGT ATATGATTGGTGTGTGTGTGTGTTTCTATTACTCCCAAAAACACTATATACGGGAGAAGC GTCGACAATACAGCGGGACAAGCAAAGACACGGAATCCTTGTACAAAATGGCTTGCAAGC AGCATAAAATGCCCTCTAGTTTTT