Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d026675_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:10:149745849:149749481:1 gene:Zm00001d026675 gene_biotype:protein_coding transcript_biotype:protein_coding description: isopropylmalate dehydrogenase3
Sequence	ATGGCGGCGGCTCTTCAAGCCACGCCGATCAAAACCCTAGCCACCTCCCGCTGGCGCGTC GAAGGTGCGGAGGCGCGGCCGCGGCCGCGGCCGATTGCGGTGAGCTTCCGTTGCTCCGCG GCGGCGAGGAGCTACAACATCACGCTCTTACCTGGGGACGGCATCGGCCCGGAGGTGGTC GCCGTCGCCAAGGACGTGCTATCCTTCGCCGGAGCCCTCGAAGGCGTCGAGCTCCGGTTT CAGGAGAAGCTGGTGGGCGGCTCGGCGCTGGACGCCACCGGCGTGCCACTCCCTGACGAG ACGCTCGACGAGGCCAAGGGTTCCGACGCTGTTCTCCTCGGCGCCATTGGAGGCTATAAG TGGGATACCAATGAGAAGCACCTCAAGCCTGAGACCGGGCTGCTGCAGCTACGTGCCGGA CTCGGGGTCTTTGCCAATCTGCGACCAGCTGCAGTTTTGCCGCAGTTGGTAGACGCATCC ACTCTGAAGAAAGAGGTAGCTGAAGGTGTTGACATCATGGTTGTCAGGGAGCTTACTGGA GGCATCTACTTTGGCAAACCCAGGGGTTTTGGAACAAATGACAAGGGAGACGATATTGGC TTCAACACAGAAGTTTATTCAGCTTCTGAGATCGATCGTATTGCACGAGTTGCATTTGAG GTCGCTCGCAAGAGAAGAGGGAAACTATGCTCGGTTGATAAAGCAAATGTGCTGGAGGCA TCCATGCTTTGGAGGAAAAAGGTGACTGCACTAGCCTCTGAATTCCCTGACATTGAGCTC TCACACATGTATGTTGACAATGCTGCAATGCAGCTTGTCAGGAATCCTAAGCAGTTTGAT ACAATTGTCACAAACAATATTTTTGGTGACATATTATCTGATGAAGCATCAATGATTACG GGAAGCATTGGAATGCTTCCATCTGCGAGTGTCGGTGAATCGGGACCTGGTCTTTTTGAA CCTATTCATGGCTCTGCCCCTGATATTGCTGGACAGGTTGAGATGACTTCTGTTTCAAAA ATTTCTGACACCAGAATACTTGATGGGGTTTAA

Peptide Sequence

PEP ID	Zm00001d026675_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:10:149745849:149749481:1 gene:Zm00001d026675 transcript:Zm00001d026675_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description: isopropylmalate dehydrogenase3
Sequence	MAAALQATPIKTLATSRWRVEGAEARPRPRPIAVSFRCSAAARSYNITLLPGDGIGPEVV AVAKDVLSFAGALEGVELRFQEKLVGGSALDATGVPLPDETLDEAKGSDAVLLGAIGGYK WDTNEKHLKPETGLLQLRAGLGVFANLRPAAVLPQLVDASTLKKEVAEGVDIMVVRELTG GIYFGKPRGFGTNDKGDDIGFNTEVYSASEIDRIARVAFEVARKRRGKLCSVDKANVLEA SMLWRKKVTALASEFPDIELSHMYVDNAAMQLVRNPKQFDTIVTNNIFGDILSDEASMIT GSIGMLPSASVGESGPGLFEPIHGSAPDIAGQVEMTSVSKISDTRILDGV

Transcript Sequence

Transcript ID	Zm00001d026675_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:149745849:149749481:1 gene:Zm00001d026675 gene_biotype:protein_coding transcript_biotype:protein_coding description: isopropylmalate dehydrogenase3
Sequence	AAACAGTCGGTGTTGTGGGCTTTAGTTGGGCTCTCGACGCTGGCGCACGGCTTGCCTGCT CTAGACGAGTCCGGCAAAAGTCGCCGTTGGATCGTACCGCTCGGAGCGGACGACGCAGAT TGCGAGACTGTACACTGTAGAGAGAGACGTCGTCGGCCTGAGCGCCGTGCAAGCAAGCAA GCGGCGGCAATGGCGGCGGCTCTTCAAGCCACGCCGATCAAAACCCTAGCCACCTCCCGC TGGCGCGTCGAAGGTGCGGAGGCGCGGCCGCGGCCGCGGCCGATTGCGGTGAGCTTCCGT TGCTCCGCGGCGGCGAGGAGCTACAACATCACGCTCTTACCTGGGGACGGCATCGGCCCG GAGGTGGTCGCCGTCGCCAAGGACGTGCTATCCTTCGCCGGAGCCCTCGAAGGCGTCGAG CTCCGGTTTCAGGAGAAGCTGGTGGGCGGCTCGGCGCTGGACGCCACCGGCGTGCCACTC CCTGACGAGACGCTCGACGAGGCCAAGGGTTCCGACGCTGTTCTCCTCGGCGCCATTGGA GGCTATAAGTGGGATACCAATGAGAAGCACCTCAAGCCTGAGACCGGGCTGCTGCAGCTA CGTGCCGGACTCGGGGTCTTTGCCAATCTGCGACCAGCTGCAGTTTTGCCGCAGTTGGTA GACGCATCCACTCTGAAGAAAGAGGTAGCTGAAGGTGTTGACATCATGGTTGTCAGGGAG CTTACTGGAGGCATCTACTTTGGCAAACCCAGGGGTTTTGGAACAAATGACAAGGGAGAC GATATTGGCTTCAACACAGAAGTTTATTCAGCTTCTGAGATCGATCGTATTGCACGAGTT GCATTTGAGGTCGCTCGCAAGAGAAGAGGGAAACTATGCTCGGTTGATAAAGCAAATGTG CTGGAGGCATCCATGCTTTGGAGGAAAAAGGTGACTGCACTAGCCTCTGAATTCCCTGAC ATTGAGCTCTCACACATGTATGTTGACAATGCTGCAATGCAGCTTGTCAGGAATCCTAAG CAGTTTGATACAATTGTCACAAACAATATTTTTGGTGACATATTATCTGATGAAGCATCA ATGATTACGGGAAGCATTGGAATGCTTCCATCTGCGAGTGTCGGTGAATCGGGACCTGGT CTTTTTGAACCTATTCATGGCTCTGCCCCTGATATTGCTGGACAGGTTGAGATGACTTCT GTTTCAAAAATTTCTGACACCAGAATACTTGATGGGGTTTAAATTATGTGTGTTTGGAAT TTGCTTCCCCTCCTGTTATTATGTGTTGAGTGCAGGACAAGGCCAATCCATTAGCTACAA TTCTTAGCGCAGCGATGCTATTGCGATATGGCCTAGGAGAAGAAAATGCTGCGAGGAGAA TTGAAGCTGCAGTTACAGAAACACTGAACCATGGGTTCCGAACTGGGGACATATATTCTC CTGGAACAACACTGGTTGGATGCAAGCGGATGGGGGAGGAAGTCTTGAAGACAGTGGAGT CACTGAAGGAAGTGGCTGCTGTGAACTGATGCATGCTGGTACTTGATTCATTGCATTTTA TTAGAAGTCGAGCCGAGCGTAAGAGAGCATGGTGTCTGGGTTATTGTTGATGTTGAATTG AAAGTTTAGTGGCTGAACCGATAGCCACTTCGCATTTCTGTGGTTTGTTTGTCTCCCTGT AGTTTTTTCTTTGGTACAAGGAAAGGATAGGCATATGTTTGCTCAATAAAATGGGATAGT TTATGCCGCTTTGAATAAAAGATGGAGTTCTGTTTTGGACTAAATA