Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026638_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:10:149256627:149258440:1 gene:Zm00001d026638 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-binding EF hand family protein
Sequence

ATGGCGGGCTCCGCGGTGGCCGTCGTCCTCCTGTCGGCCGTCGCGCTGCTCTGCCTGTAC
CACCTCCTTTTCCTCTCCCTGTCCGTCCCGGACCCGGCAGCAGCAGCAGCCGTCCCCCGC
CGCGCCGGTGGCCACCATGGCAGCAACGTTCCGTCCGGGTCAGGAACCGCCAACGTCGTC
CTCCGCTTCGGCCTGTCCGGGCAGCCGCTCCGCCTCCACGACCCCGCCTCCGCCGCCGGC
CTCCCGGACATCGACACCTTCCGCGGCAAGCTCGAGCGGCTGCTTCCTCCCGACGACCAC
GACCCCGGCTGGTCCCGCCGCTTCGACGCCGAGCTCGGCCCCGTGCACCGGTACTTCGGC
CCGGACGCGCCGCTGGACGTGCGGCAGCGGATCGCGTACCTGTTCGCGATCCTCGACCGG
TCGCCCAGGGGCGTCGGCGTCGGCGTCGGCGTCGGCGAGCTGGAGGCCTGGCTGCGCTGG
CAGGCCGCCGCCCGGCTGGACGCCGTCACGCGGAGGGAGATGGCTCCGCACGACACGGAC
CGCGACGGTGCCGTCACGCTGCGCGAGTTCTTCGCAGACTGGATCAACATGGGACATGAC
AAAATGGGGTGGTGGATGCACAAGTTTGCGAGCGCGGACAGAGACGGGGATGGCTCGCTC
AACGCCGTCGAATTCAACGACTTCCTGCATCCTGAAGACAGCAGCCAAGAGAGCGTGATG
CTGTGGCTACTCAAGGACAAGCTAAGCGAGATGGACCATGACGGAGACGGCAGGCTAAGC
CAGGAGGAGTTCGTCGCTCAATCTCACATCATCATCTCCGGCGCGCGTCACGCCGACGAC
GGTGGCCATGCCCATGACCTTGAGCGTGCCGAAGCTGCGAAGAAGTTCACAGAACTGGAC
GCCGACAAGGACAACTACTTGACGGTGGAAGAAGCGCGCTGCGTACTGCAGAGCCTCGTC
ACGGGGGAGTTCTCCTATGCTACCTCACATGCCAAGTTCTTGATGAAGGTGGTGGCCTCA
TCGAATCGAACGAAGCTGATGTGA

Peptide Sequence

PEP ID

Zm00001d026638_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:10:149256627:149258440:1 gene:Zm00001d026638 transcript:Zm00001d026638_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-binding EF hand family protein
Sequence

MAGSAVAVVLLSAVALLCLYHLLFLSLSVPDPAAAAAVPRRAGGHHGSNVPSGSGTANVV
LRFGLSGQPLRLHDPASAAGLPDIDTFRGKLERLLPPDDHDPGWSRRFDAELGPVHRYFG
PDAPLDVRQRIAYLFAILDRSPRGVGVGVGVGELEAWLRWQAAARLDAVTRREMAPHDTD
RDGAVTLREFFADWINMGHDKMGWWMHKFASADRDGDGSLNAVEFNDFLHPEDSSQESVM
LWLLKDKLSEMDHDGDGRLSQEEFVAQSHIIISGARHADDGGHAHDLERAEAAKKFTELD
ADKDNYLTVEEARCVLQSLVTGEFSYATSHAKFLMKVVASSNRTKLM

Transcript Sequence

Transcript ID

Zm00001d026638_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:149256627:149258440:1 gene:Zm00001d026638 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-binding EF hand family protein
Sequence

ACTTCCTTCCGCCGTGCCACCCACCCTCCTCTCGCGGTCGCGGGGGTAGGGCCGGGTGAG
CACGAGCGCTGCCCGCTCGCTGAACCATGGCGGGCTCCGCGGTGGCCGTCGTCCTCCTGT
CGGCCGTCGCGCTGCTCTGCCTGTACCACCTCCTTTTCCTCTCCCTGTCCGTCCCGGACC
CGGCAGCAGCAGCAGCCGTCCCCCGCCGCGCCGGTGGCCACCATGGCAGCAACGTTCCGT
CCGGGTCAGGAACCGCCAACGTCGTCCTCCGCTTCGGCCTGTCCGGGCAGCCGCTCCGCC
TCCACGACCCCGCCTCCGCCGCCGGCCTCCCGGACATCGACACCTTCCGCGGCAAGCTCG
AGCGGCTGCTTCCTCCCGACGACCACGACCCCGGCTGGTCCCGCCGCTTCGACGCCGAGC
TCGGCCCCGTGCACCGGTACTTCGGCCCGGACGCGCCGCTGGACGTGCGGCAGCGGATCG
CGTACCTGTTCGCGATCCTCGACCGGTCGCCCAGGGGCGTCGGCGTCGGCGTCGGCGTCG
GCGAGCTGGAGGCCTGGCTGCGCTGGCAGGCCGCCGCCCGGCTGGACGCCGTCACGCGGA
GGGAGATGGCTCCGCACGACACGGACCGCGACGGTGCCGTCACGCTGCGCGAGTTCTTCG
CAGACTGGATCAACATGGGACATGACAAAATGGGGTGGTGGATGCACAAGTTTGCGAGCG
CGGACAGAGACGGGGATGGCTCGCTCAACGCCGTCGAATTCAACGACTTCCTGCATCCTG
AAGACAGCAGCCAAGAGAGCGTGATGCTGTGGCTACTCAAGGACAAGCTAAGCGAGATGG
ACCATGACGGAGACGGCAGGCTAAGCCAGGAGGAGTTCGTCGCTCAATCTCACATCATCA
TCTCCGGCGCGCGTCACGCCGACGACGGTGGCCATGCCCATGACCTTGAGCGTGCCGAAG
CTGCGAAGAAGTTCACAGAACTGGACGCCGACAAGGACAACTACTTGACGGTGGAAGAAG
CGCGCTGCGTACTGCAGAGCCTCGTCACGGGGGAGTTCTCCTATGCTACCTCACATGCCA
AGTTCTTGATGAAGGTGGTGGCCTCATCGAATCGAACGAAGCTGATGTGAACCATGACGG
CAAACTGTCGCTGGAGGAGATGCTAGACGACTACATATCCTTCTACAGCACCGTGTATAT
GGATGATCATTACGCCAGTGAAGGTGAAGTAGATAGTGATTCCCGCGACGAGCTATGAGC
GGTTAAGCCAGGACAGGACAGCAAGTCGGAGGTTCTTTACTTTCAAATACACTAGGATTT
TGCAGCCAAAGGAAATGGGAAATGTACAATCAGCTGCAAACATCAATTTTGTTCATCGAG