Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d026586_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:10:148397986:148402102:-1 gene:Zm00001d026586 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lysine-specific histone demethylase 1
Sequence	ATGCAGTGCAGAACAGAACTTGCAGATACTGCACATACGGGATGTGCTTTATTCTTTGCC AGAATCATGCCAAGGGAACATGTGCTTACCGGTGGACATGGTCTTATGGTGAATGGCTAC GACCCTGTCATCAGAGCTCTCGCTCAAGGTCTCGATATTCACCTCAACCACAGGGTCACA AAGATCATACAACGCTATAACAAGGTTATTGTCTGTGTGGAAGATGGGGCGAGTTTTGTC GCAGACGCTGCTATAGTAACCGTCCCTCTCGGGGTACTCAAGGCAAACATCATCAAGTTT GAGCCTGAGCTACCGAAAGAGAAGCTCTCGGCAATCGCCGACCTTGGCGTCGGTATCGAG AACAAGATAGCTCTCAAGTTCGACACTGTGTTTTGGCCCGACGTTGAAGTGATAGGTAGG GTGGCCCCGACGTCAAACGCCTGTGGCTACTTTCTCAACCTTAACAAAGCCACAGGAAAC CCGGTCCTGGTGTGCATGGTGGCCGGAAGGTTCGCGTACGAGATCGAGAAGCTGTCGGAC GAAGAGTCCGTGAACTTCGTCATGTCCCAGCTCAGGAACATGCTGCCGCAGGCAACTGAC CCGGTTCAGTATCTGGTCTCGCGCTGGGGTAGTGACCCCAACTCACTTGGCTCCTACTCG TGCGACCTGGTGGGGAAACCAGCTGACCTGTATGAAAGGTTCTGCGCTCCGGTGGGCAGC CTGTTCTTCGCCGGGGAGGCCGCCTGCATTGACCACTCCGGATCGGTGCACGGAGCTTAC TCGTCAGGCATCGCTGCCGCAGAGGACTGCCGAAGGCGTCTGTCGGCGCAGCTAGGCATC TCGGCCGGCCTGTTCCAGGTCGGGAAGGCTGCCATGAGGGAGGAGATGACGGCTGAAGCC ATGGTCCCCTTCCAGATATCCAGGTTGTAA

Peptide Sequence

PEP ID	Zm00001d026586_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:10:148397986:148402102:-1 gene:Zm00001d026586 transcript:Zm00001d026586_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lysine-specific histone demethylase 1
Sequence	MQCRTELADTAHTGCALFFARIMPREHVLTGGHGLMVNGYDPVIRALAQGLDIHLNHRVT KIIQRYNKVIVCVEDGASFVADAAIVTVPLGVLKANIIKFEPELPKEKLSAIADLGVGIE NKIALKFDTVFWPDVEVIGRVAPTSNACGYFLNLNKATGNPVLVCMVAGRFAYEIEKLSD EESVNFVMSQLRNMLPQATDPVQYLVSRWGSDPNSLGSYSCDLVGKPADLYERFCAPVGS LFFAGEAACIDHSGSVHGAYSSGIAAAEDCRRRLSAQLGISAGLFQVGKAAMREEMTAEA MVPFQISRL

Transcript Sequence

Transcript ID	Zm00001d026586_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:148397986:148402102:-1 gene:Zm00001d026586 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lysine-specific histone demethylase 1
Sequence	GCAGAGAGAGGAGCGAGAGCGAGCGACCCCCCCGAGCCGTGCCAACCAAGAACCATCCAC CCACCACCACCACCCCGGCCGCTTCCTTGTCCCTGCCCCTCCGTTGGTCTCCTTTGCCCA TCTCATCCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTGGCGGTCGGCGTGGCTCCGGGGG CGCGAAGCGCGGGCTCGGCGGGGCGACTCGCCGGCGGCGACCTGCAGGTTTGGGTATGAG AGGGGTCACCCACGCGGCGCCCACCACAAGCGCCCCCCGCCCCCGCGGACGCCTCATGGA CGGCCTCCTCATCTTCGTCTTCTACCTCTCGCTGCCCACCCGTGCCGGCCGCGACCACTC GTCAATCGCCGCCTCTAATTGTTAGCCGCCGCCGGCACGCCATTGCTCGGCCCGCCTCCC GAGAAGCTCGATCTGCGGCCTAGCCAGCCAGCCTCACGCGGGATCAGGATCGATGGACCA GCCACCGAATGGATTCGCCGCCGGAGGTTTTTTCACGCACATTGATGGGCAAAACCGTTC TCCCCCTTCTGTAATTGTCATTGGGGGAGGGATTTCAGGCATCGCAGCTGCACGTGCTTT GTCGACTGCTTCATTTAAGGTCACACTCTTGGAGTCCAGGGACCGACCTGGTGGCCGTGT GCACACTGACTATTCTTTCGGTTGCCCAATTGACATGGGAGCATCATGGTTGCATGGTGT TTGCAATGAGAATTCTTTGGCACCACTGATTAGGATGCTTGGGCTTAGGTTATATCGCAC AAGCGGTGATAACTCTGTTCTGTATGACCATGATTTGGAAAGTTATGCTCTTTTTGATAA GCATGGTCAGCAAGTTCCCCAGGAGATAGTAAGCAAAGTTGGAGAGACATTTGAGAGAAT TCTTAAGGAGCATTATCTATTCAATGCTTTTGTGGACATTTGTGATAAGCTTACTTCTTG TTAATATTTCAGACTGTCATAGTAAGAGATGAGCATGCAAATGACATGCCTCTTTTTCAA GCCATAGCGATCGTGCTTGACAGGAATCCGCATATGAAGGATTTGTCAGGTCATGTGATT GCGTGCACTTACATTCACAGGCTGCAGGGCCTGGAATATGAAGTACTGCAGTGGTGCATA TGTAGGCTGGAGGCATGGTTCGCTACTGACATGGACAATATATCTCTGAAAACTTGGGAT CAGGTATGCAGTGCAGAACAGAACTTGCAGATACTGCACATACGGGATGTGCTTTATTCT TTGCCAGAATCATGCCAAGGGAACATGTGCTTACCGGTGGACATGGTCTTATGGTGAATG GCTACGACCCTGTCATCAGAGCTCTCGCTCAAGGTCTCGATATTCACCTCAACCACAGGG TCACAAAGATCATACAACGCTATAACAAGGTTATTGTCTGTGTGGAAGATGGGGCGAGTT TTGTCGCAGACGCTGCTATAGTAACCGTCCCTCTCGGGGTACTCAAGGCAAACATCATCA AGTTTGAGCCTGAGCTACCGAAAGAGAAGCTCTCGGCAATCGCCGACCTTGGCGTCGGTA TCGAGAACAAGATAGCTCTCAAGTTCGACACTGTGTTTTGGCCCGACGTTGAAGTGATAG GTAGGGTGGCCCCGACGTCAAACGCCTGTGGCTACTTTCTCAACCTTAACAAAGCCACAG GAAACCCGGTCCTGGTGTGCATGGTGGCCGGAAGGTTCGCGTACGAGATCGAGAAGCTGT CGGACGAAGAGTCCGTGAACTTCGTCATGTCCCAGCTCAGGAACATGCTGCCGCAGGCAA CTGACCCGGTTCAGTATCTGGTCTCGCGCTGGGGTAGTGACCCCAACTCACTTGGCTCCT ACTCGTGCGACCTGGTGGGGAAACCAGCTGACCTGTATGAAAGGTTCTGCGCTCCGGTGG GCAGCCTGTTCTTCGCCGGGGAGGCCGCCTGCATTGACCACTCCGGATCGGTGCACGGAG CTTACTCGTCAGGCATCGCTGCCGCAGAGGACTGCCGAAGGCGTCTGTCGGCGCAGCTAG GCATCTCGGCCGGCCTGTTCCAGGTCGGGAAGGCTGCCATGAGGGAGGAGATGACGGCTG AAGCCATGGTCCCCTTCCAGATATCCAGGTTGTAAGAGAGAATCTATTCAACACCGTCTT TGTGTCACCGGTTTGTTGCTTGATGTAATTGTAAAATGGTGTAAGACCTTGTTTGTTGGA ATATTCGATGGTGGATGCTGTTTTTCGT