Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026585_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:10:148388487:148395313:-1 gene:Zm00001d026585 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trypsin family protein
Sequence

ATGCAGCCCTCAGATATTTGGAAGGCGCATGCTGGTTCATCACAGTCAGAGGCTTCGGGT
CTGGATATGGAGAGGAACGGATGCAATCATAATTGCTGTCCATCTCCTCTCCAGCCAATT
GCTTCAGCTGGTCAGCACTCTGAAAGCAGCGCTGCATACTTTTCTTGGCCTACATCTACT
CTAATGCACGGCTCAGCTGAAGGCCGTGCTAATTACTTTGGGAATCTACAGAAGGGTGTA
CTACCAGGACATCTTGGTCGCTTGCCAAATGGCCAGCAAGCCACCACCTTACTTGATTTA
ATGATTATAAGAGCATTCCACAGCAAGATTCTCCGCCGGTTTAGTCTTGGTACAGCAATA
GGCTTTAGAATCAGGAAAGGAACATTGACTGACACACCTGCCATCCTTGTGTTTGTTGCT
CGAAAGGTTCACAGGAAGTGGCTCAGCCCTACTCAATGTCTTCCAGGTGCCCTTGAGGTA
GGCACGATTTTGTTTCATGTAGTTTACAAAAAGGAACAACTTTATGATGAGCTTGTTGAT
GGATTGCGTGGTAGCGACCCTAGTATAGGCTCAGGTTCACAGGTGGCTAGTCTTGAGACC
TATGGGACTTTGGGTGCCATTGTGAAGAGTCGAACTGGCAACAAGCAAGTTGGGTTCCTT
ACAAACAGGCATGTTGCGGTTGATCTGGATTATCCCAACCAGAAGATGTTCCATCCGTTG
CCTCCTAATCTTGGACCTGGAGTTTACCTAGGTGCTGTTGAGAGAGCAACATCATTTATA
ACAGATGATGTTTGGTACGGGATATATGCAGGAACAAACCCAGAAACTTTTGTCCGAGCT
GATGGTGCATTTATACCGTTTGCTGATGACTTTGAAATTGCTAGTGTCAGCACCTCCGTT
AAAGGAGTTGGAGTCATTGGTAATGTAAAGGCAATTGACTTGCAATCCCCAATTGGCAGT
CTCATTGGGAGACAAGTTGTCAAAGTTGGAAGAAGTTCTGGTATGACAACTGGGACTGTT
GTCGCATACGCACTTGAGTACAATGATGAGAAGGGAATATGTTTCTTCACTGACTTTCTT
GTCGTTGGGGAGAACCAACAAACATTTGATCTTGAAGGGGACAGTGGAAGCCTCATAATC
TTAACAGGACAAGACGGTGAGAAGCCGCAACCTATAGGAATTATATGGGGTGGTACAGCT
AACCGGGGAAGGTTGAAACTTAAAAGTGGCCAGGGTCCGGAGAACTGGACAAGTGGAGTT
GATCTTGGCCGCCTTCTTGATCTCTTGGAGCTAGATCTGATCACAACAAGTGAAGGGCTA
CAAGCTGCCTTGGAAGAACAAAGGATTACTCTAGCTGCCGCTGCGGCTGCAGCCACTAAT
TCAACTGCCACAGAATCGTCACCTGTTGCTGGCCCTCAAGAGGATGATAAAATCGACAAA
ATCTATGAGCCTCTCGGCATTAACATCATTCCTCGAGACGGTTCTGCCATATCAACGGAC
CAACCCAACGAGGATGTGGAAGAGCTAAACCTGATGTCTCCAATGCGCAATGGTGAAGAA
GGCAACGGTGACTTCAATAACTTGATGGACTTGGAATCGGAAAATTCACCTGATGGTATT
TCTATTGCTCTGAACCTGGGAGAGCGGGAGCCAGAAAGACTCCGCTCTGTTTCTGATTCG
ATGCTGGACATAGACTTGCAGAAATGA

Peptide Sequence

PEP ID

Zm00001d026585_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:10:148388487:148395313:-1 gene:Zm00001d026585 transcript:Zm00001d026585_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trypsin family protein
Sequence

MQPSDIWKAHAGSSQSEASGLDMERNGCNHNCCPSPLQPIASAGQHSESSAAYFSWPTST
LMHGSAEGRANYFGNLQKGVLPGHLGRLPNGQQATTLLDLMIIRAFHSKILRRFSLGTAI
GFRIRKGTLTDTPAILVFVARKVHRKWLSPTQCLPGALEVGTILFHVVYKKEQLYDELVD
GLRGSDPSIGSGSQVASLETYGTLGAIVKSRTGNKQVGFLTNRHVAVDLDYPNQKMFHPL
PPNLGPGVYLGAVERATSFITDDVWYGIYAGTNPETFVRADGAFIPFADDFEIASVSTSV
KGVGVIGNVKAIDLQSPIGSLIGRQVVKVGRSSGMTTGTVVAYALEYNDEKGICFFTDFL
VVGENQQTFDLEGDSGSLIILTGQDGEKPQPIGIIWGGTANRGRLKLKSGQGPENWTSGV
DLGRLLDLLELDLITTSEGLQAALEEQRITLAAAAAAATNSTATESSPVAGPQEDDKIDK
IYEPLGINIIPRDGSAISTDQPNEDVEELNLMSPMRNGEEGNGDFNNLMDLESENSPDGI
SIALNLGEREPERLRSVSDSMLDIDLQK

Transcript Sequence

Transcript ID

Zm00001d026585_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:148388487:148395313:-1 gene:Zm00001d026585 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trypsin family protein
Sequence

CCTGCTCTTCCAGTCTTGTTGACTCTTGAGTCTTCCACCTTCCTCCTCCCGTCTCGTCTC
CAACGGTGTGCTTCTTCCTCCGGACGCCTCGCTCGTCCGACCGCTTTACCTCCCTCCTCC
GGCGAGCTCCCTCCGCTGTTCCTGGTGTGTCTACGCGCCAGCTCCTCCTCTTGTCGATTT
TGGGCGCGCTCCCCTCCGCCGCCGGGCTGTGCTGCGCGGACGCGGTTCGTGGATTCGGCA
GAAGGATCTGCACCGTCCTCGCCGCCGGTGTGTTCCCTCTCCTCGCGGCCGGGATAGCCC
CGCTACCTTTTTTGGGGCGCGCGCGCGTTGACTGTGGAGTGGAGAGTGGAGATTAGGGTT
GTGCTCAGATCCTCTCCGTCCTGACCTCTTCCTCCTCTCGTTGCAGATATGCAGGAGCAC
TAGCAAAGCGGCTTCGCCATCCCTCCGGAGTCCGGAGCAGCCAGGTAAGGTCTGCTGCTC
GTTCTGTGCGACTGTGCCAAGCTAGTCTCCTCTAGGTTTGGACCTTTGGTATTGCTCTGG
AAAAAAAATGCTAGCAGCCGGCAGCTACAAGGATGCAACACAAGAATATGGTCATGAGGC
CTGTGTATAGAATTATGGATCCCCATACCAGTTAGAGTGTTATTAGTAAGCAGTTAAGTG
CAGTTATCCATTATTAGCAAGATGGGCGAAAGACTAGAAGCAGCACTAGCGCAGGCCACC
AGCGTTAAATTTTTACTAACCCGAAATTTCGAGGCCTGAACCTTCTGACTTAATTCTATG
ACCACTTAGCGAACTTGTGGCAGTAGCAGCACTTGATTCATCGTGATATTACTATGGGAA
ATACAATACAAACTACACTGATGATCTGTTTTCGGTGTGCTTAAGATAGCGGTATTAACT
ATTAAGGGTACAAGACATAAAAAAGGCCACAATCCAGGAAATTTGCCCCACTATTTCCTC
GCCATTCCCTCTCATTCTCTCCAGGCTAGAAGACAACAAGCAAGAGTGCCCTGCACTCCT
ACTGGCCACTGGATTGTCGGTCTCTGTGCACTCACATCAACTATTTGCCGTCCTCTCCAC
TCCTCCGCTGGCCATTGCGTTCCACTGCCTGGCGCCACTCCGACCCCAGTCTTAGGTAGC
ACTTCTCCAAGGTAAACCAGGAGAGTGATGGAGAGACAACTGGTTGGAAGGTGCATGTGG
AGTTAGGAATACGAGACGGACAGAGAGGGAATTCCCTGGCTTTCCCCTTTCTTAGTCATG
CTGGATCCTCCACCCATCATCGTGTCTGCTCCTCTTGTGGTCGAGTGGGGTGGCCGTGGA
GATCTGTCTGTGCGGTCTTTAGTTGGGTTTCCCCTTTTCTGGTGATTAATCAATCTATCA
TAACTTTGCTGTCTTGGATGGATTCTTTCAGCTTGTCCAAGAGCTGGATTGCTGCTCCCA
ATCAGATCCAAATCTTTTATCTGTCTTCCCCTCATCGTTTGTGAACTCGTGTGCTGCACA
GTGAGTCAGTGACATATGACAGCTAGTCTGAATCCATTTGTTCATAGTTCCATTAGATTA
TTTGTTTTGTTTTCTTGAGCCAAAAACCAATGCTAGTTGATGCCGTCATGGGAACCCAAT
TAAGCTGGCGACTCGAGAGCTAGTGCAGCTTTCCCAAAAATATTGGGGTTAAAGAAAATT
ATGTAGGATCTAGGTCAACTTTTACTCTCTTCCCTTCTGCTAGTAAGGTTTGTTACATTC
CGTATAGGAAATTGGATTAGCGTTGTTCATGTACTGATTAGGTATCATGCTCTTATTTAC
CATTGGGCATCGGCTTCAGTGGTTTCTAACTTCAGCTTACTTCCCCATGTACACACAAAT
ACTGAAAATTACGGGGACCCCAGCTTTTCTGTCACGCCTTTCTTGTATATTGTTTCAAAG
GGATCCGTTTTTTGTGGGTGGGGTGGGGGTACCTATTTTTAAAGTTATAATTGCCCGATT
GGGATCGGCATGGAGTCACCTAATGTTTACATTGTATAGCAAAAGTATATCCATAAAATG
AACACTCATTTTTGTTTCTGATTGAGGTTATGATAAGTTGATATCCGGAACACCGGTTAC
CTCTAGGTTTTCAGAGTAATGTTTTGGTTAGGCACCTTATTTAGTTATTACGTTGATTTG
TGTGGTGGAGACTCACATTGAAAGATATGAGCTAGGAAGTAGGGAATACAAACAAACGAT
CATTAAGGATCCTGCATCTACCTTCTGGTGCAATAGTCAATGTGTTTCCTGTTTTGTGGC
AGCTTGCATGTTGGCAAGTCTAATATTCTGTGTAGAATTGAAAACTCATATAGTTTCCCC
ATTTTGCAGCTCATCAATCGTTCCTCCTTAGATACATTCCCATTATATATCATGTGCCGA
GTGCCCTCCAAGATGGTTTACTACAGTAATATAGGTATTAGAGTCATATCAATCAAATTT
TCATCACTATATGTATTCATACCTTTCAATTTTCTCTGGACAAGTTATCTGTTCGAGTTT
GCCTATCATGACCTGTCCATTTGTTTACCTTCCCATGTTATAAGGTATCTTAGCTCCATT
TTGAGTTTTTACGGCAGACCCAGGGTTAGAGGCTCCCGCATGAGTGGGGTCTGGGTGTTA
GAGTATATTAGGCATGTTGAGTATATTAGGCAACTCCTCATATGGTTGGTTTAGGATTGA
TTGTAATCCCGGGATAACCTTCCTTATATCTAGGATAACATTCCTTATCTCTAGGATAGG
CTTCTTGCCCTCCAAGTCATGTACTCCTACATATTCTCTCTAGAGACTCAATGCAATACA
TCCCACACATTATACACATTCTCTCCTTCCTTCATGTTATCGGAGCCAGAGGTCACGAGT
TTGAATCCTGGTTAGCGCTATTAAATAAAATAATTGTTGTTCGCTTCTATTCCATGTCTG
AGACCCAAAAAAAGAGGCTCGACGTGAGGGGGGTGTTGGAGTATAATATAAGTGAATTGC
CTACCTCTTCCTATCAGTTTAAGCTTTTGGGTTGGACTGGTTGGTGCATGCAACTTAATA
TGGTAGAGATAAACCAAGGCGAGCCTTCTCCCCCTACAAATATGGAAAGGCTGCTCTATT
CTGAGTTTTTTTATTAATAAAAAAGGATAAGATATGCTCTTGCTGCATGCCTTATCTTCC
CAAGTTGAACACTGATTAATCTGCTGAACAGCAGACGATGTGGATCCTTTGTATTGTCCG
TGTTTTTACTGAATTCGTGCTTCCCTTGTGCACTTTTACTGGTAATCAGTTTTTATTATG
GAAAAAATACCACTATAGTCTTCTTGATATATCATTCTTTCACCTGTTGGTATTCCACTG
GGAGGAACGTTGCTTCTAGAGAACTTTGCACTTATTCTCTGCAAAGTTAACTTTATTCTT
TTAACATCATTCCTAGAATCCTAGTGCAACGCCTTTTGATGCTGGCTGTGTGCAACCATT
TTTTTACTTGTATCATTAGACAATGCGCTGCGGGGCTGTGATATTAGTTTTATATTGCTC
TGATTCGTAAACTTGTAGGTCTAATTCTTGATGAACCATTTTCTGTTGATGACTTATGGA
CTTCTTTTTTTCCTGTGATCAGTTGTGCATCAATTCTAAAACAGAGTTGATACCTTTTTT
CCATCTTCAAGGTTCTGCTCTCTCATGCCGCAGTTTTACAACGTTGAAGGCTTAAAAATT
CTACAGAACTAGATGATACTTGCATAATGCAGCCCTCAGATATTTGGAAGGCGCATGCTG
GTTCATCACAGTCAGAGGCTTCGGGTCTGGATATGGAGAGGAACGGATGCAATCATAATT
GCTGTCCATCTCCTCTCCAGCCAATTGCTTCAGCTGGTCAGCACTCTGAAAGCAGCGCTG
CATACTTTTCTTGGCCTACATCTACTCTAATGCACGGCTCAGCTGAAGGCCGTGCTAATT
ACTTTGGGAATCTACAGAAGGGTGTACTACCAGGACATCTTGGTCGCTTGCCAAATGGCC
AGCAAGCCACCACCTTACTTGATTTAATGATTATAAGAGCATTCCACAGCAAGATTCTCC
GCCGGTTTAGTCTTGGTACAGCAATAGGCTTTAGAATCAGGAAAGGAACATTGACTGACA
CACCTGCCATCCTTGTGTTTGTTGCTCGAAAGGTTCACAGGAAGTGGCTCAGCCCTACTC
AATGTCTTCCAGGTGCCCTTGAGGTAGGCACGATTTTGTTTCATGTAGTTTACAAAAAGG
AACAACTTTATGATGAGCTTGTTGATGGATTGCGTGGTAGCGACCCTAGTATAGGCTCAG
GTTCACAGGTGGCTAGTCTTGAGACCTATGGGACTTTGGGTGCCATTGTGAAGAGTCGAA
CTGGCAACAAGCAAGTTGGGTTCCTTACAAACAGGCATGTTGCGGTTGATCTGGATTATC
CCAACCAGAAGATGTTCCATCCGTTGCCTCCTAATCTTGGACCTGGAGTTTACCTAGGTG
CTGTTGAGAGAGCAACATCATTTATAACAGATGATGTTTGGTACGGGATATATGCAGGAA
CAAACCCAGAAACTTTTGTCCGAGCTGATGGTGCATTTATACCGTTTGCTGATGACTTTG
AAATTGCTAGTGTCAGCACCTCCGTTAAAGGAGTTGGAGTCATTGGTAATGTAAAGGCAA
TTGACTTGCAATCCCCAATTGGCAGTCTCATTGGGAGACAAGTTGTCAAAGTTGGAAGAA
GTTCTGGTATGACAACTGGGACTGTTGTCGCATACGCACTTGAGTACAATGATGAGAAGG
GAATATGTTTCTTCACTGACTTTCTTGTCGTTGGGGAGAACCAACAAACATTTGATCTTG
AAGGGGACAGTGGAAGCCTCATAATCTTAACAGGACAAGACGGTGAGAAGCCGCAACCTA
TAGGAATTATATGGGGTGGTACAGCTAACCGGGGAAGGTTGAAACTTAAAAGTGGCCAGG
GTCCGGAGAACTGGACAAGTGGAGTTGATCTTGGCCGCCTTCTTGATCTCTTGGAGCTAG
ATCTGATCACAACAAGTGAAGGGCTACAAGCTGCCTTGGAAGAACAAAGGATTACTCTAG
CTGCCGCTGCGGCTGCAGCCACTAATTCAACTGCCACAGAATCGTCACCTGTTGCTGGCC
CTCAAGAGGATGATAAAATCGACAAAATCTATGAGCCTCTCGGCATTAACATCATTCCTC
GAGACGGTTCTGCCATATCAACGGACCAACCCAACGAGGATGTGGAAGAGCTAAACCTGA
TGTCTCCAATGCGCAATGGTGAAGAAGGCAACGGTGACTTCAATAACTTGATGGACTTGG
AATCGGAAAATTCACCTGATGGTATTTCTATTGCTCTGAACCTGGGAGAGCGGGAGCCAG
AAAGACTCCGCTCTGTTTCTGATTCGATGCTGGACATAGACTTGCAGAAATGAGGCTGCC
CGCTGCTATGCTGCAGACGTATTGCAGGAGGCTCCGTATCATTCAGCTTTTTTTATCGAT
CATTGCAGGTATGGCCACAAAGGAAATAATCTGTTTCTAGGCGACTGGACCGGTTGTTCT
GCTTGAAACCCGGTCTGGGTTAAGCTGTGAAGCTCCTGCAGCCGCTTGCTCCTGCAGTTT
TGCGTCAAGTGTCTACCAACTCTAGCATATGTAGTGCTGCGTAAGATGTCGGCACCTCAG
ATAGACAGAGGCGCCATATTTCTTGCTCATGTAATGTTATTTGTTGTATGCTCGTTTGTA
TGTACTGCATGAAGCATTGTAAAATTGAGC