Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026555_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:10:148046896:148049408:1 gene:Zm00001d026555 gene_biotype:protein_coding transcript_biotype:protein_coding description:regulatory protein RecX family protein
Sequence

ATGTCCATGGCGGCGAGCCGCCGCCTCCTCCATCTCCTGCCGCGGCTGGAGCTGTGCCTG
CGGTCCCGTGCGCTTAGCATCCCCTTGTCTTCGCGGGCACAGGGGATGGCTCGTCGGAAG
CTTGTGACCTGCCGACAAGGTGCTTTCGAGCAGGGGAATGCAGCGAGGGATAAGGCCGTG
CCGATTCCAGATAAAGTGCTCCGTCATTGCAAGTACGCCAATGGCAGGGCCCTAGACCTA
GAGCCCATTGAAAAGAACTTCGCCAACGAGTCTATGCAATTTTCTTTCGAAGAGGAGACT
GACGATATGGTGTGCGAAATTAGCGAAAGCGTGGTGCGGGATGTGGAGAAGGCTGCAATT
GAATTGCTTGCTGCCAGAGCTTTCACTGTCTCTGAGCTTAGGAAGAAACTACGAAGTAAG
AAGTATCCTTTTGATACAATTGATGCCGTGATTGCTAATTTCAAATCAAGGGGTTTGTTG
AATGATGGTTTTTATGCTGAATCATTTTCGCGATCCCGGTGGCTAACATCAACATGGGGT
CCAAGGCGAATAAAACAGGCACTTCACCAAAAAGGTGTCCCAGAGGCAGAAGTAGATCAG
GCAACGAGAAGAGTGTTCCAGGATGGCGACGACTATGGAAAGGAGGCAACGTTCGGCATG
TCCGAAGCTTCCATGGATCATCTGTTTGCTCAGGCGTCCAAACAGTGGCAGCGTGCGCAA
AGCTTGACCCTGGAGAGCCGACGTGCGCGCATGGTGAGGTGGCTTCAGTACCGAGGGTTC
AACTGGGCTGTGACCAATGCCGTTATCAGGAAGCTGGAGGCTCAGCACCCTCCACCCTGA

Peptide Sequence

PEP ID

Zm00001d026555_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:10:148046896:148049408:1 gene:Zm00001d026555 transcript:Zm00001d026555_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:regulatory protein RecX family protein
Sequence

MSMAASRRLLHLLPRLELCLRSRALSIPLSSRAQGMARRKLVTCRQGAFEQGNAARDKAV
PIPDKVLRHCKYANGRALDLEPIEKNFANESMQFSFEEETDDMVCEISESVVRDVEKAAI
ELLAARAFTVSELRKKLRSKKYPFDTIDAVIANFKSRGLLNDGFYAESFSRSRWLTSTWG
PRRIKQALHQKGVPEAEVDQATRRVFQDGDDYGKEATFGMSEASMDHLFAQASKQWQRAQ
SLTLESRRARMVRWLQYRGFNWAVTNAVIRKLEAQHPPP

Transcript Sequence

Transcript ID

Zm00001d026555_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:148046896:148049408:1 gene:Zm00001d026555 gene_biotype:protein_coding transcript_biotype:protein_coding description:regulatory protein RecX family protein
Sequence

GGCCGCGTCAGTGCGTCACGCTAGTAGCCGGTAGGCCCCTAGGGATGTCCATGGCGGCGA
GCCGCCGCCTCCTCCATCTCCTGCCGCGGCTGGAGCTGTGCCTGCGGTCCCGTGCGCTTA
GCATCCCCTTGTCTTCGCGGGCACAGGGGATGGCTCGTCGGAAGCTTGTGACCTGCCGAC
AAGGTGCTTTCGAGCAGGGGAATGCAGCGAGGGATAAGGCCGTGCCGATTCCAGATAAAG
TGCTCCGTCATTGCAAGTACGCCAATGGCAGGGCCCTAGACCTAGAGCCCATTGAAAAGA
ACTTCGCCAACGAGTCTATGCAATTTTCTTTCGAAGAGGAGACTGACGATATGGTGTGCG
AAATTAGCGAAAGCGTGGTGCGGGATGTGGAGAAGGCTGCAATTGAATTGCTTGCTGCCA
GAGCTTTCACTGTCTCTGAGCTTAGGAAGAAACTACGAAGTAAGAAGTATCCTTTTGATA
CAATTGATGCCGTGATTGCTAATTTCAAATCAAGGGGTTTGTTGAATGATGGTTTTTATG
CTGAATCATTTTCGCGATCCCGGTGGCTAACATCAACATGGGGTCCAAGGCGAATAAAAC
AGGCACTTCACCAAAAAGGTGTCCCAGAGGCAGAAGTAGATCAGGCAACGAGAAGAGTGT
TCCAGGATGGCGACGACTATGGAAAGGAGGCAACGTTCGGCATGTCCGAAGCTTCCATGG
ATCATCTGTTTGCTCAGGCGTCCAAACAGTGGCAGCGTGCGCAAAGCTTGACCCTGGAGA
GCCGACGTGCGCGCATGGTGAGGTGGCTTCAGTACCGAGGGTTCAACTGGGCTGTGACCA
ATGCCGTTATCAGGAAGCTGGAGGCTCAGCACCCTCCACCCTGACTCTTCTGACTAGACT
AGGTGTGTGTCCGTGCGTTGCAACGGGTGTACGCTGGGATGAGTATAGACACATATCTAA
TCGGATCTTATATTTCCTGGGGGGGTCTGTAGAAAGTTTACTCGAAAGCCAAATATGTTA
AGACCTGAACATGTGTTACCCTTATGTCCCATCAGCATACTGTTCCACGCTT