Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026547_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:10:147985210:147988054:-1 gene:Zm00001d026547 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transport protein particle (TRAPP) component
Sequence

ATGCCGCCAGCCCCCAAGTCCGGCGACGCCCTCTTCGCCAGCGTGGATCGCGTCAATGCG
GAGCTGTTCACGCTCACGTACGGCGCCATAGTGCGGCAGCTGCTCACGGATCTGGAGGAG
GTCGAGGAGGTCAACAAGCAGCTCGATCAAATGGGTTACAACATTGGAACACGATTGGTC
GATGAGTTCTTAGCAAAGTCAAATGTATCAAGGTGTGTTGACTTCAAGGAGACTGCCGAT
GTTATTGCGAAGCTTGGCTTCAAAATGTTCTTGGGTGTGACTGCAACTGTGACCAATTGG
GATGTTGAGGGTACAAGTTGCAGTATTGTCCTCGAAGACAACCCTCTTGTTGATTTTGTT
GAGCTCCCTGACACTTGCCAAGGCCTTCAGTATTGCAATTTGTTAAGCGGAGTTATTAGG
GGGGCATTGGAAATGATTGATTGCAAGTTTAGGTGTCTATGA

Peptide Sequence

PEP ID

Zm00001d026547_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:10:147985210:147988054:-1 gene:Zm00001d026547 transcript:Zm00001d026547_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transport protein particle (TRAPP) component
Sequence

MPPAPKSGDALFASVDRVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGTRLV
DEFLAKSNVSRCVDFKETADVIAKLGFKMFLGVTATVTNWDVEGTSCSIVLEDNPLVDFV
ELPDTCQGLQYCNLLSGVIRGALEMIDCKFRCL

Transcript Sequence

Transcript ID

Zm00001d026547_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:147985210:147988054:-1 gene:Zm00001d026547 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transport protein particle (TRAPP) component
Sequence

GTTCTCCTCCGTCCGTCCGCCCCCGTGACGCGAGCGTCGCCAGGGAGCCGAAAGTAAGCC
TCAGTTCCGCCGGCGTGCGAGGGGTTCGATCTGGGTTAGCCTCTCACGATGCCGCCAGCC
CCCAAGTCCGGCGACGCCCTCTTCGCCAGCGTGGATCGCGTCAATGCGGAGCTGTTCACG
CTCACGTACGGCGCCATAGTGCGGCAGCTGCTCACGGATCTGGAGGAGGTCGAGGAGGTC
AACAAGCAGCTCGATCAAATGGGTTACAACATTGGAACACGATTGGTCGATGAGTTCTTA
GCAAAGTCAAATGTATCAAGGTGTGTTGACTTCAAGGAGACTGCCGATGTTATTGCGAAG
CTTGGCTTCAAAATGTTCTTGGGTGTGACTGCAACTGTGACCAATTGGGATGTTGAGGGT
ACAAGTTGCAGTATTGTCCTCGAAGACAACCCTCTTGTTGATTTTGTTGAGCTCCCTGAC
ACTTGCCAAGGCCTTCAGTATTGCAATTTGTTAAGCGGAGTTATTAGGGGGGCATTGGAA
ATGATTGATTGCAAGTTTAGGTGTCTATGAAGACGGAGGTGACATGGGTACGAGACATGC
TTCGCGGGGATGATGCCTATGAGATGCGGGTGAAACTTATCAAGCAAGTCCCGGAGGAAT
ACCCCTACAAGGATGATGACTAGTTCTATCTCATTGGAAGATACAGGACGCCTGTTTGCT
TGTTTGGATTTTTTCACATTGTTGTCGTTGACGGATTCTAGTTCTGCTATAACCTGATGC
CATACGAGGAAGGTGTGGATTATATTTTATACTCGCCGTGTGTATTGCTTATGTATTGTA
GTTGTAGAAATCATACATGATCTTCCATGAGTTGAGGCTTTGAATTATAGTCTGCTGAAT
TCAGAGCATT