Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026542_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:147942412:147945498:-1 gene:Zm00001d026542 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:G2-like-transcription factor 52 description:Myb family transcription factor PHL5
Sequence

ATGAACGCCAAGAAGATTAAGCTGCACGACTATCACCACTGCTACGGATCGCCGATGTGT
GACCCACAGCTGTTCCCGCGCGCCGCCGCCGCCACCACCGCAGGGCTCTCCTTGCACCCG
GGGCCGGGGCTCGTGGGCTCCCTGCCGCAGCGGCATGGCGGCGGCGGCGGCGGCTGGGTG
CACGAGGAGCACACCGCGACGACCCCGAGGGCGGCGCAGGGGCAGGGCGGCTGCGTCGTC
GGCTCCGACGCCGCCGCGTTCTTCGCCGCCGAGGAGCTCATGATGGGCACGGCGCGGTTC
GACTCCCCTCTCGGCGGAACGACGACGGCACTCCAGGAGCTGACAGCGTTTGCCAAGGGA
CCGCCGTTTGGCCGGCCGAGGCCCACGACGGGGGGCGAGCGCGAGCGCGAGCGGCTGTAC
CCAGTGGACCCGCTGCCGCTCCGCGACTGCGCGGCGGTGAGGACGTACTACGTCCGGCCG
CAGCAGCGCGACGGCGCCACGGAGGCGCCTCCTTCACTCGAGCTGCCATTCCAGCGGCGG
CAGCAGCAACAAGTGCACGGGCTATTCGGCGACCCTTCCACCGGCAGGCTACTCGGCGGC
GGCGAGCCTCAAGCTCACTCCTTTCCAGCTCACACCCTGAAGCAGGTTCCGGCGAGCACG
TTTGTCCCCGCGATGGAGGCGCCGCCGGGCATGCAGAGCCTTATGGACAACCCGCTGTCC
AGGAGCTGCAGTATCATCGGTGCGGCGGCGACCCACGCAGGGAGCGGTAACGCCGCCGCG
CCGGGGCAAGGTGCTCCCAGCAAGACGCGGATTCGGTGGACGCAGGACCTCCACGAGCGC
TTCGTCGACTGCGTCAACAAGCTCGGCGGCGCGGACAAGGCGACTCCCAAGGGCATTCTG
AAGCTGATGAACTCTGATGGCCTCACAATCTACCACATCAAGAGCCACCTTCAGAAATAC
CGCATAGCCAAGTACATGCCCGTGTCATCGACGTCCGAAGGGAAAGAGAAACGAGCTGCT
GCCGCCAATGACGTGCAGAATCTCGACCCCGGCACCGGGATGAAGATCACGGAAGCGCTA
CGCGTCCAGCTCGACGTGCAGAGGCGCCTCCACGAGCAGCTCGAGATCCAGAGGAATCTG
CAGCTGAGGATCGAGGCGCAAGGCAAGAAGCTGCAGAAGATGTTCGAGGAGCAGATGAAG
ACGAGCAGGACCGTGATGGGGCCGCCGCAGGGCGCCGACGTCGCCTTCATCGGCGCCGGC
GAGCAGGAGGAGGAGGTGGAGGTGGAGGACGCGTTCGACGACGTGCAGCTACTGGCGGCC
GTGTCCAGCGCCAGCGTCGGCTACCGCGACGGCGGATTCCAGTCGAAGATAAGCTAG

Peptide Sequence

PEP ID

Zm00001d026542_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:147942412:147945498:-1 gene:Zm00001d026542 transcript:Zm00001d026542_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:G2-like-transcription factor 52 description:Myb family transcription factor PHL5
Sequence

MNAKKIKLHDYHHCYGSPMCDPQLFPRAAAATTAGLSLHPGPGLVGSLPQRHGGGGGGWV
HEEHTATTPRAAQGQGGCVVGSDAAAFFAAEELMMGTARFDSPLGGTTTALQELTAFAKG
PPFGRPRPTTGGERERERLYPVDPLPLRDCAAVRTYYVRPQQRDGATEAPPSLELPFQRR
QQQQVHGLFGDPSTGRLLGGGEPQAHSFPAHTLKQVPASTFVPAMEAPPGMQSLMDNPLS
RSCSIIGAAATHAGSGNAAAPGQGAPSKTRIRWTQDLHERFVDCVNKLGGADKATPKGIL
KLMNSDGLTIYHIKSHLQKYRIAKYMPVSSTSEGKEKRAAAANDVQNLDPGTGMKITEAL
RVQLDVQRRLHEQLEIQRNLQLRIEAQGKKLQKMFEEQMKTSRTVMGPPQGADVAFIGAG
EQEEEVEVEDAFDDVQLLAAVSSASVGYRDGGFQSKIS

Transcript Sequence

Transcript ID

Zm00001d026542_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:147942412:147945498:-1 gene:Zm00001d026542 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:G2-like-transcription factor 52 description:Myb family transcription factor PHL5
Sequence

CGTGTCCTTGCCGCATCCTCCTCCTCCGGCGGCTGCGGCGTACGCGCTCCGGAGTCCGGA
GGCACTCGCCGCCGTCGAATTATTCCCATTCTCATCACGCCGTGCGCCAGGGATACTACT
ATGGACCGGCGCAGGATCTTATTCGGCCACTAGAACCCAGCGTGAGAATTCCCTCCGGAT
TGGAATTTGGATGGAAGTGGAGCTAGCATGTGCATCCCCGGCCGGCCCTATTTAAGCATC
ATCCACTGCGCTAATCCTGCTCCTCTCCTGTTCGGAACTGATTAGTTGCTTCCCTATTAC
AACCGTCTGTTTGAGGTCTCACTCACAGGATGCTGAAAATAAGCCGCGTTGTGTGTGTGT
GTGTCTACGATGAACTGTTTGACGCGTTCGTTCGAGCTCTTCTTGAAGCAGTTTGACAAG
CTGTTTGTGGTCGTCTCGTTCTCTGTTTGGTTGTCCAGTTTCAGTCCCGAGACGTCGTAA
TCGCTAGATGATCGATGAACGCCAAGAAGATTAAGCTGCACGACTATCACCACTGCTACG
GATCGCCGATGTGTGACCCACAGCTGTTCCCGCGCGCCGCCGCCGCCACCACCGCAGGGC
TCTCCTTGCACCCGGGGCCGGGGCTCGTGGGCTCCCTGCCGCAGCGGCATGGCGGCGGCG
GCGGCGGCTGGGTGCACGAGGAGCACACCGCGACGACCCCGAGGGCGGCGCAGGGGCAGG
GCGGCTGCGTCGTCGGCTCCGACGCCGCCGCGTTCTTCGCCGCCGAGGAGCTCATGATGG
GCACGGCGCGGTTCGACTCCCCTCTCGGCGGAACGACGACGGCACTCCAGGAGCTGACAG
CGTTTGCCAAGGGACCGCCGTTTGGCCGGCCGAGGCCCACGACGGGGGGCGAGCGCGAGC
GCGAGCGGCTGTACCCAGTGGACCCGCTGCCGCTCCGCGACTGCGCGGCGGTGAGGACGT
ACTACGTCCGGCCGCAGCAGCGCGACGGCGCCACGGAGGCGCCTCCTTCACTCGAGCTGC
CATTCCAGCGGCGGCAGCAGCAACAAGTGCACGGGCTATTCGGCGACCCTTCCACCGGCA
GGCTACTCGGCGGCGGCGAGCCTCAAGCTCACTCCTTTCCAGCTCACACCCTGAAGCAGG
TTCCGGCGAGCACGTTTGTCCCCGCGATGGAGGCGCCGCCGGGCATGCAGAGCCTTATGG
ACAACCCGCTGTCCAGGAGCTGCAGTATCATCGGTGCGGCGGCGACCCACGCAGGGAGCG
GTAACGCCGCCGCGCCGGGGCAAGGTGCTCCCAGCAAGACGCGGATTCGGTGGACGCAGG
ACCTCCACGAGCGCTTCGTCGACTGCGTCAACAAGCTCGGCGGCGCGGACAAGGCGACTC
CCAAGGGCATTCTGAAGCTGATGAACTCTGATGGCCTCACAATCTACCACATCAAGAGCC
ACCTTCAGAAATACCGCATAGCCAAGTACATGCCCGTGTCATCGACGTCCGAAGGGAAAG
AGAAACGAGCTGCTGCCGCCAATGACGTGCAGAATCTCGACCCCGGCACCGGGATGAAGA
TCACGGAAGCGCTACGCGTCCAGCTCGACGTGCAGAGGCGCCTCCACGAGCAGCTCGAGA
TCCAGAGGAATCTGCAGCTGAGGATCGAGGCGCAAGGCAAGAAGCTGCAGAAGATGTTCG
AGGAGCAGATGAAGACGAGCAGGACCGTGATGGGGCCGCCGCAGGGCGCCGACGTCGCCT
TCATCGGCGCCGGCGAGCAGGAGGAGGAGGTGGAGGTGGAGGACGCGTTCGACGACGTGC
AGCTACTGGCGGCCGTGTCCAGCGCCAGCGTCGGCTACCGCGACGGCGGATTCCAGTCGA
AGATAAGCTAGCCTGTCGCCTCCAGCCTCCAGGCTTCAGCTGGCTTGTCGGCATTGTAAT
TGTAGGGTTTGACTACAAATGCCATCGTAGCTATCCATGGAAGATGATGCCTACAATGTT
TGGGACGACGACGACGAGTGTTTTGGAGGGAAAAAAAGGAAACTAAATTGTTGGGGATGC
AGGCAAGGGACGATCCTCGTCGTCCACTTATGTCGTTGATTGGAAGGTGTGATCGTGCAC
CTAGCCTAACCACTTAGTTTTAAAAGTTCTCTCTGAACTTTAGAATGTGAGTGTCTATTT
TTGCTTATTTATTTTTAATAAAAAACCATCAGGTCTCTTATAGA