Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026540_T016
CDS Infomation

cds chromosome:B73_RefGen_v4:10:147919306:147925549:-1 gene:Zm00001d026540 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 29 description:Auxin response factor 5
Sequence

ATGATGGCCTCCTCGCAGGAGAAGGCCACGTCGGGTGTCCTGAGGAACGCGGCGGCGCTG
CTCGACGAAATGCAGCTCATGGGAGAAACGCAGGGTGCGAAGAAGGTGATCAACTCCGAG
CTGTGGCACGCGTGCGCGGGGCCGCTAGTGTGCTTGCCGCAGCGCGGGAGCCTCGTCTAC
TACTTCCCGCAGGGCCACAGCGAGCAGGTTGCTGCTACCACTAAAAAGATACCGAATTCT
CGCATCCCAAACTACCCGAGTCTCCCGCCGCAGCTGCTATGCCAAGTCCACAACATCACT
TTGCATGCCGACAAAGAAACTGATGAGATTTACTGCCAGATGACCCTGCAACCGTTACAC
TCGGAAACAGACGTCTTCCCAATTCCAACTCTTGGTGCCTATACCAAAAGCAAGCACCCC
ACCGAATACTTCTGCAAAAATCTAACCGCGAGCGATACAAGTACGCATGGCGGCTTCTCA
GTGCCGCGGAGAGCTGCCGAGAAGCTGTTTCCGCAACTGGATTACTCAATGCAGCCTCCT
AATCAGGAGCTTATCGTCCGAGATTTGCATGATAACATGTGGACGTTCCGTCACATTTAT
CGTGGCCAGCCAAAGCGACATCTTCTAACAACTGGATGGAGCCTTTTTGTTGGGGCGAAA
CGGCTTAAAGCTGGAGACTCTGTCTTATTTATCAGGGATGAGAAGTCACAGCTCCTTGTC
GGTGTTAGGAGGGCCACCCGACAACAACCGGCTTTGTCTTCATCCGTCCTGTCTACTGAC
AGTATGCACATAGGCGTTCTTGCTGCAGCAGCTCATGCAGCATCAAGTGGTGGCTCATTT
ACTATTTACTACAATCCTCGGACAAGCCCGTCGCCATTTGTGATTCCTCTTGCGAGGTAC
AATAAGGCCACGTATCTGCAACCATCTGTTGGAATGAGGTTCGCGATGATGTTTGAGACG
GAGGAGTCAAGCAAGCGCAGATGCACAGGTGCTATTGTGGGAATTAGCGACTATGACCCG
ATGCGATGGCCAAACTCAAAGTGGCGCAACTTGCAGGTAGAATGGGATGAACATGGGTAT
GGAGAAAGACCTGAAAGAGTTAGCATATGGGATATCGAAACTCCAGAGAACATGGTTTTC
TCTTCTCCTTTGAATTCGAAGCGGCAATGTCTTCCTAGCTATGGAGTTCCGGGCCTACAA
ATTGGATCTGTAAATATGTCATCAATTCCAAGGGCACAAGGAAATCCTATCGGTAACTTG
CAGCACATGCCAGGGATGGGCTCAGAATTGGCTCTACTGCTTCTCAATCAATCTGGCCAG
AACATCGGAAGTCCAATCGCTTGTCAACAATCATCATTTTCCAGCATTATTCAAAATGCT
AAGCACAGCTATTTCCCTCCAAAGACGTTTGGTGCTTCCACTGCTTCAATGAAGCAAGAA
AGCATGCCTTCGACTGAAGCCCAGCCACAGTTGAATGCTCTTGGTATTCAGAGAAGTGAT
CGAGTAAGCTGTGAAGTTCAGACAGCTAGTGATTCAAATCCTGCACAGGAGATGAGTGTT
AAACCAAGAGCACCAAGAAGCACAGATTCACACTCAAGCCAAAGCATTTCGGATCAAAAC
AGCAAGGGTGAGCCTAGAACAAAAACTCGAAGGAGCAAGAAGAGCTCGTATCAGAAAACC
ATTTCAGATAAATCTGAGCTTTGTTCAGTACCTTCTCAGATTTGTGACGACAAGAAGCAT
GGTTCAGAGCCAAGACTGGCTGACTGTGAAGCCGAACAAGCTACCTGTGGGAATAACGAA
GAATCATCTGGAGCACTTACACATGGTGATTTTGCTGGAGAGCTCCAAGTTCAGCAGCAG
GTTGAACAGCATGAACTACTTGCGCCACCAAAGATAGAATCATCAAAGTCACCTGATGGA
GGGAAGTCCGTCAGTTCGTTCCCAAACCAAGGGTGTATCCCACAGTTCTTTGAGGGTCTG
GACTGGATGATTCCACCTTCCTATTACCAAGACTCCAATGGCATCCAATCAGTTACCGCG
TCGGATAACATTTTTAATCCATCTGAAGGTATACCTTCCACCATGAACGCTGATGCCTTG
GATGCGTTTCAAACATCTTGCCTTTCTGAGTGCTTTCCTAGCTCCATTCAAGAGTTCATC
GGCAGTCCGGATATAAACACACTGGCATTTATGTCGCCTGAGATGCAACAATTGGATGCC
GGCAGCAACTTGCCGAGCACATCCAACTCCTATGTGCAGATGAGTTTCTCGGAGGAGAGC
CACAGCGCATCCTTGAGTGGCCTTCACATGGAAGCCATCCATATAAACAGCTCGTCATGC
TCTCAGCCACTGGCGACGGGGAGCTTCGATGCAGGGGCGTTCCCGAAACTGTCAAACATA
AGAGAATGCCAACCCTTGCCTCTGCAAGAGATCCACACCAGTTCCATGGGAACACCTTCA
TGCAGTATGGACGCGGCGGCAGAGTACGGCACGGATAGAAGTGCGAAGCAAATGAAACCA
CCGGTCCGGACCTATACAAAGGTTCAGAAGTTAGGATCAGTTGGAAGATGTATTGACGTT
ACACGGTTCAGAGATTACCATGAGTTGAGGTCAGCCATTGCGTGCATGTTTGGACTCCAG
GGGAAGCTGGAACATCCTGGCAGTTCAGATTGGAAGCTTGTTTATGTCGACTACGAGAAC
GATGTTCTTCTCGTTGGAGACGATCCATGGGAGGAGTTCATCAACTGTGTGAGATGCATC
CGGATCTTATCACCTTCGGAAGTACAGCAGATGAGCGAGAACGGCGTGCATGTCTTGAAC
GACTGCATCCAAATAGCTTAG

Peptide Sequence

PEP ID

Zm00001d026540_P016
PEP Infomation

pep chromosome:B73_RefGen_v4:10:147919306:147925549:-1 gene:Zm00001d026540 transcript:Zm00001d026540_T016 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 29 description:Auxin response factor 5
Sequence

MMASSQEKATSGVLRNAAALLDEMQLMGETQGAKKVINSELWHACAGPLVCLPQRGSLVY
YFPQGHSEQVAATTKKIPNSRIPNYPSLPPQLLCQVHNITLHADKETDEIYCQMTLQPLH
SETDVFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPP
NQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLV
GVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFTIYYNPRTSPSPFVIPLARY
NKATYLQPSVGMRFAMMFETEESSKRRCTGAIVGISDYDPMRWPNSKWRNLQVEWDEHGY
GERPERVSIWDIETPENMVFSSPLNSKRQCLPSYGVPGLQIGSVNMSSIPRAQGNPIGNL
QHMPGMGSELALLLLNQSGQNIGSPIACQQSSFSSIIQNAKHSYFPPKTFGASTASMKQE
SMPSTEAQPQLNALGIQRSDRVSCEVQTASDSNPAQEMSVKPRAPRSTDSHSSQSISDQN
SKGEPRTKTRRSKKSSYQKTISDKSELCSVPSQICDDKKHGSEPRLADCEAEQATCGNNE
ESSGALTHGDFAGELQVQQQVEQHELLAPPKIESSKSPDGGKSVSSFPNQGCIPQFFEGL
DWMIPPSYYQDSNGIQSVTASDNIFNPSEGIPSTMNADALDAFQTSCLSECFPSSIQEFI
GSPDINTLAFMSPEMQQLDAGSNLPSTSNSYVQMSFSEESHSASLSGLHMEAIHINSSSC
SQPLATGSFDAGAFPKLSNIRECQPLPLQEIHTSSMGTPSCSMDAAAEYGTDRSAKQMKP
PVRTYTKVQKLGSVGRCIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEN
DVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGVHVLNDCIQIA

Transcript Sequence

Transcript ID

Zm00001d026540_T016
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:147919306:147925549:-1 gene:Zm00001d026540 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 29 description:Auxin response factor 5
Sequence

GGCTTCACTTGCTCGTCTCCGCTGGACGCTGGTTGGTGGTTGCCTTCGCTCTTCATCCTT
CAACCACCAAGCCTTGGCATCGTTCTGCCCTGCGTGTGGCGGCGGTCCCTGGAGAGGAGA
CAAGCCGACTGGCATGCAGGCGTGGTAGAGCTCTCACTTCCCCTCAGCCACCAATGCTAA
AGTGCGCATAAGCTGCTGGGAGCCGATATTGCATCCGTCGGGAGCTTGGCACCAACAAAA
GCTCGAGTTTTCCCTTTTTCAGCTTCGGTCTGGTGCGTGCGGCGCGGCGCCTCCCGGAGA
TGATGGCCTCCTCGCAGGAGAAGGCCACGTCGGGTGTCCTGAGGAACGCGGCGGCGCTGC
TCGACGAAATGCAGCTCATGGGAGAAACGCAGGGTGCGAAGAAGGTGATCAACTCCGAGC
TGTGGCACGCGTGCGCGGGGCCGCTAGTGTGCTTGCCGCAGCGCGGGAGCCTCGTCTACT
ACTTCCCGCAGGGCCACAGCGAGCAGGTTGCTGCTACCACTAAAAAGATACCGAATTCTC
GCATCCCAAACTACCCGAGTCTCCCGCCGCAGCTGCTATGCCAAGTCCACAACATCACTT
TGCATGCCGACAAAGAAACTGATGAGATTTACTGCCAGATGACCCTGCAACCGTTACACT
CGGAAACAGACGTCTTCCCAATTCCAACTCTTGGTGCCTATACCAAAAGCAAGCACCCCA
CCGAATACTTCTGCAAAAATCTAACCGCGAGCGATACAAGTACGCATGGCGGCTTCTCAG
TGCCGCGGAGAGCTGCCGAGAAGCTGTTTCCGCAACTGGATTACTCAATGCAGCCTCCTA
ATCAGGAGCTTATCGTCCGAGATTTGCATGATAACATGTGGACGTTCCGTCACATTTATC
GTGGCCAGCCAAAGCGACATCTTCTAACAACTGGATGGAGCCTTTTTGTTGGGGCGAAAC
GGCTTAAAGCTGGAGACTCTGTCTTATTTATCAGGGATGAGAAGTCACAGCTCCTTGTCG
GTGTTAGGAGGGCCACCCGACAACAACCGGCTTTGTCTTCATCCGTCCTGTCTACTGACA
GTATGCACATAGGCGTTCTTGCTGCAGCAGCTCATGCAGCATCAAGTGGTGGCTCATTTA
CTATTTACTACAATCCTCGGACAAGCCCGTCGCCATTTGTGATTCCTCTTGCGAGGTACA
ATAAGGCCACGTATCTGCAACCATCTGTTGGAATGAGGTTCGCGATGATGTTTGAGACGG
AGGAGTCAAGCAAGCGCAGATGCACAGGTGCTATTGTGGGAATTAGCGACTATGACCCGA
TGCGATGGCCAAACTCAAAGTGGCGCAACTTGCAGGTAGAATGGGATGAACATGGGTATG
GAGAAAGACCTGAAAGAGTTAGCATATGGGATATCGAAACTCCAGAGAACATGGTTTTCT
CTTCTCCTTTGAATTCGAAGCGGCAATGTCTTCCTAGCTATGGAGTTCCGGGCCTACAAA
TTGGATCTGTAAATATGTCATCAATTCCAAGGGCACAAGGAAATCCTATCGGTAACTTGC
AGCACATGCCAGGGATGGGCTCAGAATTGGCTCTACTGCTTCTCAATCAATCTGGCCAGA
ACATCGGAAGTCCAATCGCTTGTCAACAATCATCATTTTCCAGCATTATTCAAAATGCTA
AGCACAGCTATTTCCCTCCAAAGACGTTTGGTGCTTCCACTGCTTCAATGAAGCAAGAAA
GCATGCCTTCGACTGAAGCCCAGCCACAGTTGAATGCTCTTGGTATTCAGAGAAGTGATC
GAGTAAGCTGTGAAGTTCAGACAGCTAGTGATTCAAATCCTGCACAGGAGATGAGTGTTA
AACCAAGAGCACCAAGAAGCACAGATTCACACTCAAGCCAAAGCATTTCGGATCAAAACA
GCAAGGGTGAGCCTAGAACAAAAACTCGAAGGAGCAAGAAGAGCTCGTATCAGAAAACCA
TTTCAGATAAATCTGAGCTTTGTTCAGTACCTTCTCAGATTTGTGACGACAAGAAGCATG
GTTCAGAGCCAAGACTGGCTGACTGTGAAGCCGAACAAGCTACCTGTGGGAATAACGAAG
AATCATCTGGAGCACTTACACATGGTGATTTTGCTGGAGAGCTCCAAGTTCAGCAGCAGG
TTGAACAGCATGAACTACTTGCGCCACCAAAGATAGAATCATCAAAGTCACCTGATGGAG
GGAAGTCCGTCAGTTCGTTCCCAAACCAAGGGTGTATCCCACAGTTCTTTGAGGGTCTGG
ACTGGATGATTCCACCTTCCTATTACCAAGACTCCAATGGCATCCAATCAGTTACCGCGT
CGGATAACATTTTTAATCCATCTGAAGGTATACCTTCCACCATGAACGCTGATGCCTTGG
ATGCGTTTCAAACATCTTGCCTTTCTGAGTGCTTTCCTAGCTCCATTCAAGAGTTCATCG
GCAGTCCGGATATAAACACACTGGCATTTATGTCGCCTGAGATGCAACAATTGGATGCCG
GCAGCAACTTGCCGAGCACATCCAACTCCTATGTGCAGATGAGTTTCTCGGAGGAGAGCC
ACAGCGCATCCTTGAGTGGCCTTCACATGGAAGCCATCCATATAAACAGCTCGTCATGCT
CTCAGCCACTGGCGACGGGGAGCTTCGATGCAGGGGCGTTCCCGAAACTGTCAAACATAA
GAGAATGCCAACCCTTGCCTCTGCAAGAGATCCACACCAGTTCCATGGGAACACCTTCAT
GCAGTATGGACGCGGCGGCAGAGTACGGCACGGATAGAAGTGCGAAGCAAATGAAACCAC
CGGTCCGGACCTATACAAAGGTTCAGAAGTTAGGATCAGTTGGAAGATGTATTGACGTTA
CACGGTTCAGAGATTACCATGAGTTGAGGTCAGCCATTGCGTGCATGTTTGGACTCCAGG
GGAAGCTGGAACATCCTGGCAGTTCAGATTGGAAGCTTGTTTATGTCGACTACGAGAACG
ATGTTCTTCTCGTTGGAGACGATCCATGGGAGGAGTTCATCAACTGTGTGAGATGCATCC
GGATCTTATCACCTTCGGAAGTACAGCAGATGAGCGAGAACGGCGTGCATGTCTTGAACG
ACTGCATCCAAATAGCTTAGCAAAGTCACGGCTGTATGCTCTACAGCCTGCACAGTGTAG
GCTCTTCTTGTAAATAAAAATATACAGCATGTGCGTCAAATTCTCTGGTCGCTCTGTTTC
TTTTGTAGCACGAGAAGAAACAATTACAGATGTCAACATCCTGC