Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026515_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:10:147456535:147460691:1 gene:Zm00001d026515 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:viviparous10 description:Molybdopterin biosynthesis protein CNX1
Sequence

ATGCTTCTAGCTTGTGCTATTCAGCAGAAATGCAAAGTGGTTGACCTAGGTATTGCAGAG
GACACTGAAGAAAGTCTCAAGGAGCATATGGATGCAGCTTTGCGTTCTAATGCTGATATA
ATCATTACTTCTGGTGGTGTTTCCATGGGCGACAGAGATCTTGTCAAACCTTGCCTGGCA
AAGATGGGTAAAATTCACTTTGAGAAGATCCAGATGAAACCAGGAAAGCCGTTAACCTTT
GCTGAGATCACCACACAAGACACGCCAAAGCCATCTAAAACAGTTCTTGCATTTGGTTTG
CCTGGAAATCCAGTGAGCTGTATTGTTTGCTTTAATCTTTTTGTTGTTCCTGCAATCCGT
CTTCTCTCTGGCTGGTCAAACCCTCATCTGCAAAGAGTGCATGTGCGCATATCACATCCT
TTAAGAGCAGACCCACATCGTACAGAGTTTCACCGTGCAGCAATTAGATGGGTGCTTGAT
GATGGATCTGGTCGACCTGGTTTTGTTGCTGAGAGTACTGGCCATCAGGCTAGTAGCCGT
CTTCTTAGTATGAAATCTGCTAATGCCCTGCTGGAAATACCATCCACTGGACAAATATTG
GCAGCTGGGACATCTATCCAAGCCATACTTATTTCAGACATAATAACTTCTTCAGATAAA
CTGCCTACTCCTTCAAATCCGTATCCATCTCGTGGTCCTTCTGCAAAAAGTATTTCCGCA
GATGTATCTCAGATTGCATCTCCACAGGATGCTGAAGTTAAAGTCGCAATTCTGACTGTA
AGTGACACTGTTTCATCAGGTGCTGGCCCTGATAGGAGTGGCCCAAGAGCTGTATCTGTA
GTGAATTCTTCATCAGAGAAACTGGGTGGTGCAACTGTGGTTGCCACTGCAGTTGTTCCT
GATGAAGTGGACAAGATCAAGGGCATTCTGGTACAATGGAGTGATATTGACCATGTTAAC
CTCATTCTGACATTAGGTGGGACTGGCTTCACACCCAGAGATGTCACACCGGAAGCAACA
AAAATGGTGATACAGAAAGAAGCGCCTGGTCTCACATTTGTTATGCTTCAAGAAAGTTTG
AAGATTACACCATTCGCAATGCTATCCCGGGCCACAGCTGGAATCAGAGGATCAACACTT
ATCATCAACATGCCTGGCAACCCAAATGCTGTGGCAGAATGCCTGGAAGCACTCCTCCCA
GCGCTCAAGCACGCCCTGAAGCAGATCAAGGGTGACAAGAGGGAGAAGCACCCTCGCCAC
ACTCCACATGCCGCAGCGGCGCCTGTGGACCAGTGGGAGCGGAGCTTCAGAGCCGCATCA
TCTGGTAGTGGTGGGTGCTCATGTGATCCCTGA

Peptide Sequence

PEP ID

Zm00001d026515_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:10:147456535:147460691:1 gene:Zm00001d026515 transcript:Zm00001d026515_T008 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:viviparous10 description:Molybdopterin biosynthesis protein CNX1
Sequence

MLLACAIQQKCKVVDLGIAEDTEESLKEHMDAALRSNADIIITSGGVSMGDRDLVKPCLA
KMGKIHFEKIQMKPGKPLTFAEITTQDTPKPSKTVLAFGLPGNPVSCIVCFNLFVVPAIR
LLSGWSNPHLQRVHVRISHPLRADPHRTEFHRAAIRWVLDDGSGRPGFVAESTGHQASSR
LLSMKSANALLEIPSTGQILAAGTSIQAILISDIITSSDKLPTPSNPYPSRGPSAKSISA
DVSQIASPQDAEVKVAILTVSDTVSSGAGPDRSGPRAVSVVNSSSEKLGGATVVATAVVP
DEVDKIKGILVQWSDIDHVNLILTLGGTGFTPRDVTPEATKMVIQKEAPGLTFVMLQESL
KITPFAMLSRATAGIRGSTLIINMPGNPNAVAECLEALLPALKHALKQIKGDKREKHPRH
TPHAAAAPVDQWERSFRAASSGSGGCSCDP

Transcript Sequence

Transcript ID

Zm00001d026515_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:147456535:147460691:1 gene:Zm00001d026515 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:viviparous10 description:Molybdopterin biosynthesis protein CNX1
Sequence

GCCGTGCCGCTGCAGGGCGCGCTCGGGCTCGTCCTCGCGGAGGACGTCTGCGCGCCCGAT
CCGCTCCCTCCCTTCCGCGCCTCCATCAAGGACGGATACGCCGTCGTGGCCTCCGATGGG
CCAGGGGAGTATCCTGTGGTCACGGAGTCGAGGGCGGGCGACGACGCCCTCGGAGTGGTT
GTCGTCCCCGGCACGGTCGCCTACGTCACCACCGGAGGGCCGGTTCCCGATGGCGCCGAT
GCCGTCGTGCAGGTGGAGGACACCGAGCAGCTCCCTGGCGGAGCGGATGGGTCCAAGAGG
GTTAGGATTCTTGCGCGGGCCTCCCAAAGACAGGACATCCGCAGTGTGGGATGTGACATA
GAGAAGGATTCGATTGTGCTCAAGTCTGGTGAGCATATAGGTCCTGCAGAAATTGGGCTA
CTTGCAACAGTGGGTGTAACCACTGTCAAGGTGTACCCTCGGCCAACAATCGCTGTATTC
TCCACAGGGGATGAGCTAGTGCAGCCAGCCACTGCCACCCTCAGCCGTGGTCAGATTCGT
GATTCCAATCGAGCCATGCTTCTAGCTTGTGCTATTCAGCAGAAATGCAAAGTGGTTGAC
CTAGGTATTGCAGAGGACACTGAAGAAAGTCTCAAGGAGCATATGGATGCAGCTTTGCGT
TCTAATGCTGATATAATCATTACTTCTGGTGGTGTTTCCATGGGCGACAGAGATCTTGTC
AAACCTTGCCTGGCAAAGATGGGTAAAATTCACTTTGAGAAGATCCAGATGAAACCAGGA
AAGCCGTTAACCTTTGCTGAGATCACCACACAAGACACGCCAAAGCCATCTAAAACAGTT
CTTGCATTTGGTTTGCCTGGAAATCCAGTGAGCTGTATTGTTTGCTTTAATCTTTTTGTT
GTTCCTGCAATCCGTCTTCTCTCTGGCTGGTCAAACCCTCATCTGCAAAGAGTGCATGTG
CGCATATCACATCCTTTAAGAGCAGACCCACATCGTACAGAGTTTCACCGTGCAGCAATT
AGATGGGTGCTTGATGATGGATCTGGTCGACCTGGTTTTGTTGCTGAGAGTACTGGCCAT
CAGGCTAGTAGCCGTCTTCTTAGTATGAAATCTGCTAATGCCCTGCTGGAAATACCATCC
ACTGGACAAATATTGGCAGCTGGGACATCTATCCAAGCCATACTTATTTCAGACATAATA
ACTTCTTCAGATAAACTGCCTACTCCTTCAAATCCGTATCCATCTCGTGGTCCTTCTGCA
AAAAGTATTTCCGCAGATGTATCTCAGATTGCATCTCCACAGGATGCTGAAGTTAAAGTC
GCAATTCTGACTGTAAGTGACACTGTTTCATCAGGTGCTGGCCCTGATAGGAGTGGCCCA
AGAGCTGTATCTGTAGTGAATTCTTCATCAGAGAAACTGGGTGGTGCAACTGTGGTTGCC
ACTGCAGTTGTTCCTGATGAAGTGGACAAGATCAAGGGCATTCTGGTACAATGGAGTGAT
ATTGACCATGTTAACCTCATTCTGACATTAGGTGGGACTGGCTTCACACCCAGAGATGTC
ACACCGGAAGCAACAAAAATGGTGATACAGAAAGAAGCGCCTGGTCTCACATTTGTTATG
CTTCAAGAAAGTTTGAAGATTACACCATTCGCAATGCTATCCCGGGCCACAGCTGGAATC
AGAGGATCAACACTTATCATCAACATGCCTGGCAACCCAAATGCTGTGGCAGAATGCCTG
GAAGCACTCCTCCCAGCGCTCAAGCACGCCCTGAAGCAGATCAAGGGTGACAAGAGGGAG
AAGCACCCTCGCCACACTCCACATGCCGCAGCGGCGCCTGTGGACCAGTGGGAGCGGAGC
TTCAGAGCCGCATCATCTGGTAGTGGTGGGTGCTCATGTGATCCCTGAGGAGCCCTGATC
GACTGTGAAATACCAAAAGAGTGGAACCAAATACGAGACAGTAGGAGAGCTCTGTGTCCT
CCGTGCTCCATTGCATTGCCTGCGTGCCTGCGTCCAGTTCGATGTTGAAGTTTTGATCTT
GTTCTTTGGTATGTTATATGGAGATGCGGGAGTCCTTGATTGTTACTTGCTCACGAACTT
CTTTCACTGTGCTACAAATAATGTATAATATGTAATCTCATTGACTGGCCGTTTGATGTT
TTGTCATGGTCTAATAGAGGAGCCGCAGTAATTTGAGTGGCGTTTGTC