Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d026479_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:10:146713842:146719047:1 gene:Zm00001d026479 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar cation/proton exchanger 2
Sequence	ATGGAGACTCCGCAAGTCGAGATGGGCGGTTTCAAGGTCAACAGCCCGCAAGTGCCCAAC GGTGGCTTGCGGCCCACCGTGTCTTCGTCCTGGAACTCGCAAGGGACGGTCGAGAGGGCG CTCAGGAGCATCAGGATCGTCATTTTTACTTCCAAGCTCAACTTGCTCATGCCGTTCGGA CCTGCCTCCATCATTCTCCACTTCACGACTAGGAGACATGGATTGGTTTTTCTTTTCAGC ATGCTAGGAATTATGCCTTTAGCTGAGCGATTGGGATATGCAACTGAGCAGCTTGCAGTA TACACTGGTCCAACAGTTGGTGGCCTTCTGAATGCTACATTTGGAAATGCAACTGAAATG ATCATTGCAATATATGCTTTGAAAAATGGAATGATCCGAGTAGTGCAGCAGTCACTATTG GGTTCCATTTTGTCAAATATGCTGTTGGTTATGGGCTGTGCTTTCTTTGCTGGTGGTATT GTTCATCGCAACAAAGACCAAGTCTTCAGTAAGGCAACTGCAGCTGTCAACTCAGGTTTA CTGTTGATGGCTGTCATGGGATTGATGTTTCCTGCCGTTCTCCATTTCACTCATTCAGAA GTGCGGCAAGGAGCATCAGAGGTTGCTCTTTCAAGATTCAGTAGCTGTATTATGCTTGTG GCGTATGCAAGCTACCTCTATTTCCAATTAAGTGGACGGAGCAACATTTACAGTCCAATA GGCAGTGAAGAGGCGCCTAGCGAGGATAACCCGGAAGAAGATGAAGAAGCTGAGATTGGC ATGTGGGAGGCAGTAACATGGCTTGCGGTGTTAACATTCTGGGTGTCTTTTCTTTCTGAG TACCTAGTTAACGCCATTGAGGGAGCATCTGATTCATTGAACCTACCGGTGGCTTTTATC AGTGTTATTTTGCTTCCTATTGTGGGCAATGCAGCTGAACATGCAAGCGCAATAATGTTT GCCATGAAAGATAAGCTTGACATAACACTTGGTGTTGCAATTGGTTCATCAACACAGATA TCAATGTTTGTGATTCCATTTTGTGTTGTTATTGGTTGGACGATGGGACAAAAGATGGAC TTGAATTTTCAGCTATTTGAGACAGCAACTCTCTTCATAACAGTACTTGTGGTGGCATTT ATGTTACAGGATGGCACTGCGAACTACTTGAAAGGACTTATGCTGATCCTATGTTATCTA ATAGTTGCTGCCAGTTTCTTTGTTCACGTTGATCCACAATCAAGTGAAGGCTGA

Peptide Sequence

PEP ID	Zm00001d026479_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:10:146713842:146719047:1 gene:Zm00001d026479 transcript:Zm00001d026479_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar cation/proton exchanger 2
Sequence	METPQVEMGGFKVNSPQVPNGGLRPTVSSSWNSQGTVERALRSIRIVIFTSKLNLLMPFG PASIILHFTTRRHGLVFLFSMLGIMPLAERLGYATEQLAVYTGPTVGGLLNATFGNATEM IIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAAVNSGL LLMAVMGLMFPAVLHFTHSEVRQGASEVALSRFSSCIMLVAYASYLYFQLSGRSNIYSPI GSEEAPSEDNPEEDEEAEIGMWEAVTWLAVLTFWVSFLSEYLVNAIEGASDSLNLPVAFI SVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWTMGQKMD LNFQLFETATLFITVLVVAFMLQDGTANYLKGLMLILCYLIVAASFFVHVDPQSSEG

Transcript Sequence

Transcript ID	Zm00001d026479_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:146713842:146719047:1 gene:Zm00001d026479 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar cation/proton exchanger 2
Sequence	GCCGCCCGGGCTCGCGTGGCGGATGATGATTCCTAGAGAGCCACGGCGGCCGGAGCACCC TTCCTCCTCCTGACCCCGAGCTGCCCCGCCCATCGCAGCGGGCGGCTCTGCCCTCCGCCG CAGCGTCTGTGTCCAGACTGGAGGATGGAGACTCCGCAAGTCGAGATGGGCGGTTTCAAG GTCAACAGCCCGCAAGTGCCCAACGGTGGCTTGCGGCCCACCGTGTCTTCGTCCTGGAAC TCGCAAGGGACGGTCGAGAGGGCGCTCAGGAGCATCAGGATCGTCATTTTTACTTCCAAG CTCAACTTGCTCATGCCGTTCGGACCTGCCTCCATCATTCTCCACTTCACGACTAGGAGA CATGGATTGGTTTTTCTTTTCAGCATGCTAGGAATTATGCCTTTAGCTGAGCGATTGGGA TATGCAACTGAGCAGCTTGCAGTATACACTGGTCCAACAGTTGGTGGCCTTCTGAATGCT ACATTTGGAAATGCAACTGAAATGATCATTGCAATATATGCTTTGAAAAATGGAATGATC CGAGTAGTGCAGCAGTCACTATTGGGTTCCATTTTGTCAAATATGCTGTTGGTTATGGGC TGTGCTTTCTTTGCTGGTGGTATTGTTCATCGCAACAAAGACCAAGTCTTCAGTAAGGCA ACTGCAGCTGTCAACTCAGGTTTACTGTTGATGGCTGTCATGGGATTGATGTTTCCTGCC GTTCTCCATTTCACTCATTCAGAAGTGCGGCAAGGAGCATCAGAGGTTGCTCTTTCAAGA TTCAGTAGCTGTATTATGCTTGTGGCGTATGCAAGCTACCTCTATTTCCAATTAAGTGGA CGGAGCAACATTTACAGTCCAATAGGCAGTGAAGAGGCGCCTAGCGAGGATAACCCGGAA GAAGATGAAGAAGCTGAGATTGGCATGTGGGAGGCAGTAACATGGCTTGCGGTGTTAACA TTCTGGGTGTCTTTTCTTTCTGAGTACCTAGTTAACGCCATTGAGGGAGCATCTGATTCA TTGAACCTACCGGTGGCTTTTATCAGTGTTATTTTGCTTCCTATTGTGGGCAATGCAGCT GAACATGCAAGCGCAATAATGTTTGCCATGAAAGATAAGCTTGACATAACACTTGGTGTT GCAATTGGTTCATCAACACAGATATCAATGTTTGTGATTCCATTTTGTGTTGTTATTGGT TGGACGATGGGACAAAAGATGGACTTGAATTTTCAGCTATTTGAGACAGCAACTCTCTTC ATAACAGTACTTGTGGTGGCATTTATGTTACAGGATGGCACTGCGAACTACTTGAAAGGA CTTATGCTGATCCTATGTTATCTAATAGTTGCTGCCAGTTTCTTTGTTCACGTTGATCCA CAATCAAGTGAAGGCTGAAGCCATATATCCTAAGGAATTTTTGTATTTTGTTTTGTGGAT ACTGATGTGTACTAGGGTAGTCTCGATGTATACAGAAACAAGAAGTGGCAGCATGTTATA TTCGATTAATTGTATGGGTTTTCTGTTTTCCTTGAAATTTAACTATTGGGCTGAATGTAA ATTTGGGTATATGATTTGATGAT