Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026405_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:145315798:145319169:-1 gene:Zm00001d026405 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glutamyl-tRNA reductase1 description:Glutamyl-tRNA reductase

Sequence

ATGGCGACCACGACGTCAGCGACCACCGCCGCCGCAGCAGCCGCCACCACCGCCAAGCCG
CGGGGGTCGTCGTCGGCCCTCTGCCAGAGGGTGGCCGGCGGCGGCAGGCGGCGCTCCGGG
GTGGTGCGGTGCGACGCCGCCGGCGTGGAGGCCCAGGCGCAGGCCGTGGCAAAGGCTGCC
AGCGTCGCCGCCCTCGAGCAGTTCAAGATATCCGCCGACCGGTACATGAAGGAAAGGAGT
ACCATAGCTGTGATAGGCCTCAGTGTACACACAGCACCAGTGGAGATGCGTGAAAAACTT
GCTGTTGCAGAGGAACTGTGGCCCCGTGCTATTCAAGAACTCACTAGCCTGAACCATATT
GAAGAGGCTGCTGTTCTTAGTACCTGTAATAGAATGGAAATTTATGTGGTGGCGCTATCA
TGGAACCGTGGTATCAGAGAAGTAGTGGACTGGATGTCGAAGAAAAGTGGTATTCCCGCT
TCCGAGCTTAGGGAGCACCTGTTCATCTTGCGAAGCAGTGATGCCACACGCCATCTGTTT
GAGGTGTCAGCTGGCCTTGACTCTTTGGTTCTCGGTGAAGGACAAATCCTTGCTCAGGTT
AAACAAGTTGTGAGGAGTGGACAGAACAGTGGAGGCTTGGGAAAGAACATCGATAGGATG
TTCAAGGATGCAATCACTGCTGGAAAGCGTGTCCGCAGCGAGACCAACATATCATCTGGT
GCTGTTTCTGTCAGTTCAGCGGCGGTTGAACTGGCCCTGATGAAGCTTCCGAAGTCTGAA
GCACTGTCAGCTAGGATGCTTCTGATTGGTGCTGGTAAAATGGGAAAGCTAGTGATCAAA
CATCTGGTTGCCAAAGGATGCAAGAAGGTTGTTGTGGTGAACCGCTCCGTGGAAAGGGTG
GATGCTATTCGTGAGGAGATGAAAGATATAGAGATCGTGTACAGGCCTCTCTCAGACATG
TATCAAGCTGCTGCTGAAGCTGATGTCGTGTTCACCAGCACCGCATCTGAAACTTCATTG
TTCGCAAAAGAACACGCAGAGGCACTCCCCCCTGTCTCTGATACTATGGGAGGTGTTCGC
CTGTTTGTCGACATATCTGTCCCCAGGAATGTCAGCGCATGTGTGTCTGAAGTTGGCGCT
GCACGAGTGTACAATGTCGACGACTTGAAAGAGGTGGTGGAAGCCAACAAGGAGGACCGG
CTCAGGAAAGCAATGGAGGCGCAGACAATCATCACCGAAGAACTGAGACGGTTCGAGGCA
TGGAGGGACTCGCTGGAGACCGTTCCGACCATCAAGAAGCTGAGGTCGTACGCGGACAGG
ATCAGGGCCTCGGAGCTCGAGAAGTGCCTGCAGAAAGTAGGTGAGGACGCCCTCACCAAG
AAGATGAGGAGAGCCATCGAGGAGCTGAGCACCGGCATCGTTAACAAGCTCCTCCATGGC
CCGCTGCAGCACCTGAGGTGCGACGGCAGCGACAGCCGCACCCTTGACGAGACGCTCGAG
AACATGCACGCCCTCAACCGGATGTTCAGCCTCGACATGGAGAAGGCGATCATCGAGCAG
AAGATCAAGGCCAAGGTGGAGAAGACACAAAACTGA

Peptide Sequence

PEP ID

Zm00001d026405_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:145315798:145319169:-1 gene:Zm00001d026405 transcript:Zm00001d026405_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glutamyl-tRNA reductase1 description:Glutamyl-tRNA reductase

Sequence

MATTTSATTAAAAAATTAKPRGSSSALCQRVAGGGRRRSGVVRCDAAGVEAQAQAVAKAA
SVAALEQFKISADRYMKERSTIAVIGLSVHTAPVEMREKLAVAEELWPRAIQELTSLNHI
EEAAVLSTCNRMEIYVVALSWNRGIREVVDWMSKKSGIPASELREHLFILRSSDATRHLF
EVSAGLDSLVLGEGQILAQVKQVVRSGQNSGGLGKNIDRMFKDAITAGKRVRSETNISSG
AVSVSSAAVELALMKLPKSEALSARMLLIGAGKMGKLVIKHLVAKGCKKVVVVNRSVERV
DAIREEMKDIEIVYRPLSDMYQAAAEADVVFTSTASETSLFAKEHAEALPPVSDTMGGVR
LFVDISVPRNVSACVSEVGAARVYNVDDLKEVVEANKEDRLRKAMEAQTIITEELRRFEA
WRDSLETVPTIKKLRSYADRIRASELEKCLQKVGEDALTKKMRRAIEELSTGIVNKLLHG
PLQHLRCDGSDSRTLDETLENMHALNRMFSLDMEKAIIEQKIKAKVEKTQN

Transcript Sequence

Transcript ID

Zm00001d026405_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:145315798:145319169:-1 gene:Zm00001d026405 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glutamyl-tRNA reductase1 description:Glutamyl-tRNA reductase

Sequence

AGCCAATCACAGGCCAGAGCACATCACACTCCGCTACGCTCTCATCCTCCGGCTCATCTC
CTTTCTCCTCCCCGATGCCACCGAGTCCACCGCCACCACGCCCAACACGCGTCATAAAAA
ATGGGTACGCATCAATAAAGAGGAGCTTGGGAAGTTGCCAAGGCCTCCGATTTCGCTAAT
GCGACGATAATGGCGACCACGACGTCAGCGACCACCGCCGCCGCAGCAGCCGCCACCACC
GCCAAGCCGCGGGGGTCGTCGTCGGCCCTCTGCCAGAGGGTGGCCGGCGGCGGCAGGCGG
CGCTCCGGGGTGGTGCGGTGCGACGCCGCCGGCGTGGAGGCCCAGGCGCAGGCCGTGGCA
AAGGCTGCCAGCGTCGCCGCCCTCGAGCAGTTCAAGATATCCGCCGACCGGTACATGAAG
GAAAGGAGTACCATAGCTGTGATAGGCCTCAGTGTACACACAGCACCAGTGGAGATGCGT
GAAAAACTTGCTGTTGCAGAGGAACTGTGGCCCCGTGCTATTCAAGAACTCACTAGCCTG
AACCATATTGAAGAGGCTGCTGTTCTTAGTACCTGTAATAGAATGGAAATTTATGTGGTG
GCGCTATCATGGAACCGTGGTATCAGAGAAGTAGTGGACTGGATGTCGAAGAAAAGTGGT
ATTCCCGCTTCCGAGCTTAGGGAGCACCTGTTCATCTTGCGAAGCAGTGATGCCACACGC
CATCTGTTTGAGGTGTCAGCTGGCCTTGACTCTTTGGTTCTCGGTGAAGGACAAATCCTT
GCTCAGGTTAAACAAGTTGTGAGGAGTGGACAGAACAGTGGAGGCTTGGGAAAGAACATC
GATAGGATGTTCAAGGATGCAATCACTGCTGGAAAGCGTGTCCGCAGCGAGACCAACATA
TCATCTGGTGCTGTTTCTGTCAGTTCAGCGGCGGTTGAACTGGCCCTGATGAAGCTTCCG
AAGTCTGAAGCACTGTCAGCTAGGATGCTTCTGATTGGTGCTGGTAAAATGGGAAAGCTA
GTGATCAAACATCTGGTTGCCAAAGGATGCAAGAAGGTTGTTGTGGTGAACCGCTCCGTG
GAAAGGGTGGATGCTATTCGTGAGGAGATGAAAGATATAGAGATCGTGTACAGGCCTCTC
TCAGACATGTATCAAGCTGCTGCTGAAGCTGATGTCGTGTTCACCAGCACCGCATCTGAA
ACTTCATTGTTCGCAAAAGAACACGCAGAGGCACTCCCCCCTGTCTCTGATACTATGGGA
GGTGTTCGCCTGTTTGTCGACATATCTGTCCCCAGGAATGTCAGCGCATGTGTGTCTGAA
GTTGGCGCTGCACGAGTGTACAATGTCGACGACTTGAAAGAGGTGGTGGAAGCCAACAAG
GAGGACCGGCTCAGGAAAGCAATGGAGGCGCAGACAATCATCACCGAAGAACTGAGACGG
TTCGAGGCATGGAGGGACTCGCTGGAGACCGTTCCGACCATCAAGAAGCTGAGGTCGTAC
GCGGACAGGATCAGGGCCTCGGAGCTCGAGAAGTGCCTGCAGAAAGTAGGTGAGGACGCC
CTCACCAAGAAGATGAGGAGAGCCATCGAGGAGCTGAGCACCGGCATCGTTAACAAGCTC
CTCCATGGCCCGCTGCAGCACCTGAGGTGCGACGGCAGCGACAGCCGCACCCTTGACGAG
ACGCTCGAGAACATGCACGCCCTCAACCGGATGTTCAGCCTCGACATGGAGAAGGCGATC
ATCGAGCAGAAGATCAAGGCCAAGGTGGAGAAGACACAAAACTGAGGCCAGGAAGCAATT
TTTCTACCACCATTATCTATATATATAGCGTCTCCAATCTCATTCCATTTTTTTATCCTT
TCACTCAGTGAGCCCTTCCCCTGCTCACTGTGATCGTTAACTGTGTCTGTGAATTAGAGC
CATGGCAGCGTGTTGTCAATAACAGCAATGTGTCCCAATTCCCCACAGAAGAAAGACTAT
ATTTATATGCATTTATTGGAGCAAATAGTTTACTTATTTATTATGGTGGTAGACTAATCT
AAATTTTAATTTTCTACGTTTGTTTCTTA