Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d026331_T029
CDS Infomation	cds chromosome:B73_RefGen_v4:10:143634579:143644144:1 gene:Zm00001d026331 gene_biotype:protein_coding transcript_biotype:protein_coding description:SIT4 phosphatase-associated family protein
Sequence	ATGAAGACATTAGTGGAGGATGAAGATCTTATGAATTTGCTTTTCTCCTTCCTAAAACCT GACCACCCTCATGGGACATTGTTGGCTGGTTACTTTGCTAAGGTAGTAATTTGTTTGGCG ATGAGGAAGACACTTCAACTAGTTCATTATGTGCAGGGCCATCCTGAAATAGTTAGCCAG CTTGTTGATCTTATTGGGATTACTTCTATCATGGAGGTTTTGATTCGCTTAATCGGTGCA GATGAAACTATGTATTCAAGCCATGCAGATTCTATGCAATGGTTAGATGACATACAAGTC CTTGAGATGATTGTTGACAAGTTCAGCACATCAGATTCTGCTGAGGTTCACGCAAATGCT GCTGAAATCCTTTGTGCAGTAACCAGATACGCCCCTCCAGCACTTGCTGCAAAGATTTCC AGTCCAAGCTTCGTAGGGAGGTTATTTCAACATGCTTTTGAAGATTCAAGGCCTAAATCG GTGCTGGTCCACTCATTATCAGTGTGCATATCTTTGTTAGATCCTAAGAGACTTGTATCG GCTTCCTACCAAGCTTTCCGTAGCCAGTTGAGCCATGGAACACTTGTCACTGCAAGTCCA GAGACAGTAAATGGCATGCTGGATAGCCTAGGGGATTTGTTGAAGCTGCTGGATGTTTCA TCTGCCGAAAATGTTCTGCCAACAACATATGGAAGCTTACAACCTCCACTCGGGAAACAT CGCTTAAAGATTGTTGAGTTCATCTCTGTTCTACTATCAATTGGTAGTGAAGTTGCCGAA ACGCGACTGATTCAACTAGGAGCAATCCAGCACGCTATAGATCTATTTTTTGAGTACCCG TTTAACAACTTCTTGCACCACCATGTCGAGAATATCATTGGGTCATGTCTGGAGAGTAAG CAGGATCACCTGATTGGCCATGTCCTTGATGAGTGTAAACTTGTTACAAGAATTCTGGAA GCGGAGAAGAACTCTGCTCTGTCGTCAGATTTAACTAAGCATACATTGTCTACAGAGGGA AGATGTCCACCAAGGATAGGAATTGTTGGTCATATGACACGAATAGCTAACAAGCTCCTT CAGCTGGCCAATACCAACATCATGGTCCAATCATATTTGCAGCAAAATTCTGATTGGATT GAGTGGCACACCAGTACCCTAACGAAGCGTAATGCATTAGAAAATGTTTACCAGTGGGCA TGTGGTCGACCAACATCACTACAGGATCGTGGTAGGGATAGTGATGATGAAGACTTCCGA GATAGGGACTACGATGTGGCTGCACTTGCTAGTAATTTAAGCCAGGCATTTAAATATGGT ATCTACAGTAACGATGACATTGACGAGGCTCAAGCATCACTTGAGCGGGATGATGAGGAT GTATATTTTGATGATGAATCTGCAGAGGTAGTAATCTCCTCCCTTCGCCTTGGAGACGAC CAAGAAAGTGGCTCGCTCTTTACAAATTCCAACTGGTTTGCATTTGACGAGGACAAGGCA CTGAATGATGGTTTGGTTAGCCCAGAAGCTTCCCCATCTCCAAATTCAGAAATATCCGCA CTAAAAGAGGATGATGAAGTCATTCTTGGCGAAGTAATAGATGACACAGAAGGTTCTGAA CCAACTCTACCAGTCTCCAACAAAGACGCAAACGAAGAGTCTGGTCACACCGTCTTGGCA AATGGTACCATTGACAAACAGGAAGATGATATCAGGCCACTGACTCCGGATGTAAAAGAG AGTCAACCCGAGTTTGTGGAATGGAAGGAGGAAGAAGCTGAACCTGGTGATGTTGCTGAG AAGGATACTGCAGTTCCTGGTATTGAGGTTGAAAGTGAGAAGCAGCTGAATTCCATGGAC GATGTTATGCTTTGTGATGCCGAGTTAGGAGAGGAAAAGAAGAGTGGTGGTATGCTTGGA TCTTCAGCACCTGAGGCAGAAGCAGCATCGCCTGTTTCATCTGACATCGATTCAATCAAG CACCCGGAACAAGCTGCTGACAGTGCTGTATCAGAGTATCCAATGGGCGAACAAAATCCT GAGATATGA

Peptide Sequence

PEP ID	Zm00001d026331_P029
PEP Infomation	pep chromosome:B73_RefGen_v4:10:143634579:143644144:1 gene:Zm00001d026331 transcript:Zm00001d026331_T029 gene_biotype:protein_coding transcript_biotype:protein_coding description:SIT4 phosphatase-associated family protein
Sequence	MKTLVEDEDLMNLLFSFLKPDHPHGTLLAGYFAKVVICLAMRKTLQLVHYVQGHPEIVSQ LVDLIGITSIMEVLIRLIGADETMYSSHADSMQWLDDIQVLEMIVDKFSTSDSAEVHANA AEILCAVTRYAPPALAAKISSPSFVGRLFQHAFEDSRPKSVLVHSLSVCISLLDPKRLVS ASYQAFRSQLSHGTLVTASPETVNGMLDSLGDLLKLLDVSSAENVLPTTYGSLQPPLGKH RLKIVEFISVLLSIGSEVAETRLIQLGAIQHAIDLFFEYPFNNFLHHHVENIIGSCLESK QDHLIGHVLDECKLVTRILEAEKNSALSSDLTKHTLSTEGRCPPRIGIVGHMTRIANKLL QLANTNIMVQSYLQQNSDWIEWHTSTLTKRNALENVYQWACGRPTSLQDRGRDSDDEDFR DRDYDVAALASNLSQAFKYGIYSNDDIDEAQASLERDDEDVYFDDESAEVVISSLRLGDD QESGSLFTNSNWFAFDEDKALNDGLVSPEASPSPNSEISALKEDDEVILGEVIDDTEGSE PTLPVSNKDANEESGHTVLANGTIDKQEDDIRPLTPDVKESQPEFVEWKEEEAEPGDVAE KDTAVPGIEVESEKQLNSMDDVMLCDAELGEEKKSGGMLGSSAPEAEAASPVSSDIDSIK HPEQAADSAVSEYPMGEQNPEI

Transcript Sequence

Transcript ID	Zm00001d026331_T029
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:143634579:143644144:1 gene:Zm00001d026331 gene_biotype:protein_coding transcript_biotype:protein_coding description:SIT4 phosphatase-associated family protein
Sequence	TGTGCAGATTTCCATTTATAGCTTGTGAAATATTTACATGTGACGTGGATGTCATCATGA AGACATTAGTGGAGGATGAAGATCTTATGAATTTGCTTTTCTCCTTCCTAAAACCTGACC ACCCTCATGGGACATTGTTGGCTGGTTACTTTGCTAAGGTAGTAATTTGTTTGGCGATGA GGAAGACACTTCAACTAGTTCATTATGTGCAGGGCCATCCTGAAATAGTTAGCCAGCTTG TTGATCTTATTGGGATTACTTCTATCATGGAGGTTTTGATTCGCTTAATCGGTGCAGATG AAACTATGTATTCAAGCCATGCAGATTCTATGCAATGGTTAGATGACATACAAGTCCTTG AGATGATTGTTGACAAGTTCAGCACATCAGATTCTGCTGAGGTTCACGCAAATGCTGCTG AAATCCTTTGTGCAGTAACCAGATACGCCCCTCCAGCACTTGCTGCAAAGATTTCCAGTC CAAGCTTCGTAGGGAGGTTATTTCAACATGCTTTTGAAGATTCAAGGCCTAAATCGGTGC TGGTCCACTCATTATCAGTGTGCATATCTTTGTTAGATCCTAAGAGACTTGTATCGGCTT CCTACCAAGCTTTCCGTAGCCAGTTGAGCCATGGAACACTTGTCACTGCAAGTCCAGAGA CAGTAAATGGCATGCTGGATAGCCTAGGGGATTTGTTGAAGCTGCTGGATGTTTCATCTG CCGAAAATGTTCTGCCAACAACATATGGAAGCTTACAACCTCCACTCGGGAAACATCGCT TAAAGATTGTTGAGTTCATCTCTGTTCTACTATCAATTGGTAGTGAAGTTGCCGAAACGC GACTGATTCAACTAGGAGCAATCCAGCACGCTATAGATCTATTTTTTGAGTACCCGTTTA ACAACTTCTTGCACCACCATGTCGAGAATATCATTGGGTCATGTCTGGAGAGTAAGCAGG ATCACCTGATTGGCCATGTCCTTGATGAGTGTAAACTTGTTACAAGAATTCTGGAAGCGG AGAAGAACTCTGCTCTGTCGTCAGATTTAACTAAGCATACATTGTCTACAGAGGGAAGAT GTCCACCAAGGATAGGAATTGTTGGTCATATGACACGAATAGCTAACAAGCTCCTTCAGC TGGCCAATACCAACATCATGGTCCAATCATATTTGCAGCAAAATTCTGATTGGATTGAGT GGCACACCAGTACCCTAACGAAGCGTAATGCATTAGAAAATGTTTACCAGTGGGCATGTG GTCGACCAACATCACTACAGGATCGTGGTAGGGATAGTGATGATGAAGACTTCCGAGATA GGGACTACGATGTGGCTGCACTTGCTAGTAATTTAAGCCAGGCATTTAAATATGGTATCT ACAGTAACGATGACATTGACGAGGCTCAAGCATCACTTGAGCGGGATGATGAGGATGTAT ATTTTGATGATGAATCTGCAGAGGTAGTAATCTCCTCCCTTCGCCTTGGAGACGACCAAG AAAGTGGCTCGCTCTTTACAAATTCCAACTGGTTTGCATTTGACGAGGACAAGGCACTGA ATGATGGTTTGGTTAGCCCAGAAGCTTCCCCATCTCCAAATTCAGAAATATCCGCACTAA AAGAGGATGATGAAGTCATTCTTGGCGAAGTAATAGATGACACAGAAGGTTCTGAACCAA CTCTACCAGTCTCCAACAAAGACGCAAACGAAGAGTCTGGTCACACCGTCTTGGCAAATG GTACCATTGACAAACAGGAAGATGATATCAGGCCACTGACTCCGGATGTAAAAGAGAGTC AACCCGAGTTTGTGGAATGGAAGGAGGAAGAAGCTGAACCTGGTGATGTTGCTGAGAAGG ATACTGCAGTTCCTGGTATTGAGGTTGAAAGTGAGAAGCAGCTGAATTCCATGGACGATG TTATGCTTTGTGATGCCGAGTTAGGAGAGGAAAAGAAGAGTGGTGGTATGCTTGGATCTT CAGCACCTGAGGCAGAAGCAGCATCGCCTGTTTCATCTGACATCGATTCAATCAAGCACC CGGAACAAGCTGCTGACAGTGCTGTATCAGAGTATCCAATGGGCGAACAAAATCCTGAGA TATGAAATGAATTTGAGGGCAGCAGAGTTCCGCTCACGTGATGGCGGATGATGATGGACG TGCAGGAAGCACTTGGAACTGGTTGGACCATTACTGTACAAGCAGTTTGAGGATCATGTG TGGGTTTTCTGTTCTACTCTCTTGGAGGAAGGTGGTCCCGGAACATGCATCTGATGGAGC CTCAAAGGTTCCACTTAGTCTCATGGAGATGCTTAGGTTCGATGTGTAACATATTCATGG AGACGCAAAATTCAGAAAGTTGACTTCCCTGCCCTTTTCCTTAATCAGTGGGGTTCTGGT TGTGTCACTCTGGTAAATAGCCGATAATTGAATAGGTGATATCTGGTCTGGCTACATGTC CATTACTGTAGTTGGTGCTATTTGTACGAAAGTTTTGGCTCAAATGCAGTCAGTTGATTC TTG