Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026317_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:10:143493129:143494597:1 gene:Zm00001d026317 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bHLH-transcription factor 7 description:Transcription factor PIF4
Sequence

ATGCTAGATGAAGCGATCGACTACCTAAAATCCCTCCAGCTACAGCTTCAGATGCTGGTC
ATGGGGAAGGGGGGAGGAATGGCACCGGTGGTTCCTCCTGAGCTGCAGCAGTACATGCAC
TACATCACGGCCGACCCCGCCCACCAGATGATGCCTCCGCCGCTGCGGCCCTCCGCCGGG
CAGCTGCAGCCCGCCGCCGGCCGGCAGTTTCAGATAACCCAAGCAGCAGCAGCAGCAGCC
AACAACGACAACGACCCCCAGCGACGACGACAGTCCAACGTCGAGTCGGACTTCTTGAGC
CAGATGCAGAACCTGCACCCCTCCGATCAGCCGCCTCATCATCACAACTTCCTCAGGCCG
CCGAGATTGCAGCTCTTTACGCCGGAACAGAGGGGCGGCGGCGGCGGCCTGCCTACCACG
AGCCACAACGCCGGCTGGATTTCCGGGAGGAGTTCCTCGTATAATTTTATGGAGTGA

Peptide Sequence

PEP ID

Zm00001d026317_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:10:143493129:143494597:1 gene:Zm00001d026317 transcript:Zm00001d026317_T006 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bHLH-transcription factor 7 description:Transcription factor PIF4
Sequence

MLDEAIDYLKSLQLQLQMLVMGKGGGMAPVVPPELQQYMHYITADPAHQMMPPPLRPSAG
QLQPAAGRQFQITQAAAAAANNDNDPQRRRQSNVESDFLSQMQNLHPSDQPPHHHNFLRP
PRLQLFTPEQRGGGGGLPTTSHNAGWISGRSSSYNFME

Transcript Sequence

Transcript ID

Zm00001d026317_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:143493129:143494597:1 gene:Zm00001d026317 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bHLH-transcription factor 7 description:Transcription factor PIF4
Sequence

GACCACGCGCGTATGATACGTGTGGACGACGGATCGTGCATGACCCTGCTGTGGGCGTTT
GATCTCGTGTTTAATTTGTCTAGAACACTTGTAGAGGAGAAGGGACAGGATCAACGAGAA
GCTGAGAGCGTTGCAGGAGCTTCTTCCAAACTGCACCAAGACCGACAAAGTTTCCATGCT
AGATGAAGCGATCGACTACCTAAAATCCCTCCAGCTACAGCTTCAGATGCTGGTCATGGG
GAAGGGGGGAGGAATGGCACCGGTGGTTCCTCCTGAGCTGCAGCAGTACATGCACTACAT
CACGGCCGACCCCGCCCACCAGATGATGCCTCCGCCGCTGCGGCCCTCCGCCGGGCAGCT
GCAGCCCGCCGCCGGCCGGCAGTTTCAGATAACCCAAGCAGCAGCAGCAGCAGCCAACAA
CGACAACGACCCCCAGCGACGACGACAGTCCAACGTCGAGTCGGACTTCTTGAGCCAGAT
GCAGAACCTGCACCCCTCCGATCAGCCGCCTCATCATCACAACTTCCTCAGGCCGCCGAG
ATTGCAGCTCTTTACGCCGGAACAGAGGGGCGGCGGCGGCGGCCTGCCTACCACGAGCCA
CAACGCCGGCTGGATTTCCGGGAGGAGTTCCTCGTATAATTTTATGGAGTGACGTGTGTG
CTCCCTGATGCTGCCAAAATTAATTTGAAACAACCGTTCTCATCTTGAACTCAGAAGACG
GCGTCAGCGCACTCTGGGACCTTCAGCTAGCGTGTGGTGGTGTCCATGCATGAATGAATG
CAGTAGTAGTTATATATATATTAGCAAGCTAGTTGTGTCATTAAATAAAGGAACGCTGTG
TGACTG