Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d026296_T023
CDS Infomation	cds chromosome:B73_RefGen_v4:10:143158098:143161100:1 gene:Zm00001d026296 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trypsin family protein
Sequence	ATGAGGCCTTCAGATGACAGGGCACAGCTTTCAGGCTTTGCACAATCAGATGAATCGACA CTTGATGTGGAGGGGCATTGCTGCCATCAGCCGTCATTCCCTTGTTCGCCGTCAATGCAA CCGATTGTTTCTGGGTGCACACACACAGAGAACAGCGCGGCATACTTCTTATGGCCAACA TCAAACCTACAGCACTGTGCAGCCGAGGGGCGTGCAAACTACTTTGCCAACCTTTCAAAG GGACTTCTGCCAAAGATTGGCCGTCGGCTGCCCAAGGGCCAGCAAGCAAACAGCTTGCTT GACTTGATGACTATAAGGGCTTTCCATAGCAAGGTACTGCGTTGCTTTGGCCTTGGAACG GCAGTGGGCTTCCGCATCAGGAAAGGGGTTCTAACCGATATCCCTGCAATTCTTTGCTTC GTTGCTCGCAAAGTTCACAAGAAGTGGCTTGATCCGGCCCATTGCCTTCCTGCCATTCTT GCGGTAGGGAAGCTTCGGATCATTGACAGGGTCCAGGAGGTATTTGGTGTGATGTTGATG TTGTTGAGTTTTCGTACTACGGTGCTCCAGCTCAAACTCCAAAAGTGCAAATATTCACAG AGCTCGTGGATAAGTTGTGTGGCAGTGATGAATGTATTGGCTCCGGCTCTCAGGTTAGAC TTGAATTACTTAAAAGCAGCTGGTAAGGCTTCTCGGAATGATGCAATGTCAAGAAGGCAT GCTTTTGAAAACTTTCTCCTTGCACATCTTGTTTCACTCTTCCAGGTTGCAAGTCAGGAC ACTTTTGGAACTTTGGGCGCCATTGTAAAACGGAGAACTGGCAACAAGCTGGTAGGTTTC GTCACCAACCGACATGTTGCTGTTGACTTGGACTACCCAAACCAGAAGATGTATCACCCA TTGCCACCCAACCTTGGGCCTGGTGTTTATCTTGGAGCTGTCGAAAGGGCAACATCTTTT ATCACGGATGATGTTTGGTATGGAATCTATGCTGGAACAAACCCAGAGACATTTGTACGT GCTGATGGGGCATTCATCCCATTTGCTCATGACTTTGACATCTCCACAGTCACAACTACA GTTAGGGGTGTTGGTGATATTGGGGATGTTAAGGTTATAGATCTGCAGTGTCCACTTAAT AGATTAATAGGGAGGCGAGTATGCAAAATCGGCAGAAGTTCTGGCCACACGACTGGAACT GTGATGGCTTATGCCCTTGAGTACAACGACGAGAAAGGAATAAGCTTTTTCACTGACCTC CTTGTCGTCGGTGAGAACCGCCAAACATTTGATCTAGAAGGTGACAGTGGAAGCCTCATT ATCCTGACTGGCCAGGACAGCGAGAAGCCGCGTCCCATCGGGATAATATGGGGTGGCACA GCAAACCGTGGGAGGCTAAAGCTTAGGTGTGACCATGGCCCTCAAAATTGGACCAGTGGA GTTGATCTTGGCCGCCTTCTGGATCGTCTTGAACTTGATCTTATCATAACCAGCGAATCA CTCAAAGATACTGGAAAATCCACTGTGATGTACGCTTCTGTTGCTTTTTGTTCCACGACA GATAACTGA

Peptide Sequence

PEP ID	Zm00001d026296_P023
PEP Infomation	pep chromosome:B73_RefGen_v4:10:143158098:143161100:1 gene:Zm00001d026296 transcript:Zm00001d026296_T023 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trypsin family protein
Sequence	MRPSDDRAQLSGFAQSDESTLDVEGHCCHQPSFPCSPSMQPIVSGCTHTENSAAYFLWPT SNLQHCAAEGRANYFANLSKGLLPKIGRRLPKGQQANSLLDLMTIRAFHSKVLRCFGLGT AVGFRIRKGVLTDIPAILCFVARKVHKKWLDPAHCLPAILAVGKLRIIDRVQEVFGVMLM LLSFRTTVLQLKLQKCKYSQSSWISCVAVMNVLAPALRLDLNYLKAAGKASRNDAMSRRH AFENFLLAHLVSLFQVASQDTFGTLGAIVKRRTGNKLVGFVTNRHVAVDLDYPNQKMYHP LPPNLGPGVYLGAVERATSFITDDVWYGIYAGTNPETFVRADGAFIPFAHDFDISTVTTT VRGVGDIGDVKVIDLQCPLNRLIGRRVCKIGRSSGHTTGTVMAYALEYNDEKGISFFTDL LVVGENRQTFDLEGDSGSLIILTGQDSEKPRPIGIIWGGTANRGRLKLRCDHGPQNWTSG VDLGRLLDRLELDLIITSESLKDTGKSTVMYASVAFCSTTDN

Transcript Sequence

Transcript ID	Zm00001d026296_T023
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:143158098:143161100:1 gene:Zm00001d026296 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trypsin family protein
Sequence	ATGAGGCCTTCAGATGACAGGGCACAGCTTTCAGGCTTTGCACAATCAGATGAATCGACA CTTGATGTGGAGGGGCATTGCTGCCATCAGCCGTCATTCCCTTGTTCGCCGTCAATGCAA CCGATTGTTTCTGGGTGCACACACACAGAGAACAGCGCGGCATACTTCTTATGGCCAACA TCAAACCTACAGCACTGTGCAGCCGAGGGGCGTGCAAACTACTTTGCCAACCTTTCAAAG GGACTTCTGCCAAAGATTGGCCGTCGGCTGCCCAAGGGCCAGCAAGCAAACAGCTTGCTT GACTTGATGACTATAAGGGCTTTCCATAGCAAGGTACTGCGTTGCTTTGGCCTTGGAACG GCAGTGGGCTTCCGCATCAGGAAAGGGGTTCTAACCGATATCCCTGCAATTCTTTGCTTC GTTGCTCGCAAAGTTCACAAGAAGTGGCTTGATCCGGCCCATTGCCTTCCTGCCATTCTT GCGGTAGGGAAGCTTCGGATCATTGACAGGGTCCAGGAGGTATTTGGTGTGATGTTGATG TTGTTGAGTTTTCGTACTACGGTGCTCCAGCTCAAACTCCAAAAGTGCAAATATTCACAG AGCTCGTGGATAAGTTGTGTGGCAGTGATGAATGTATTGGCTCCGGCTCTCAGGTTAGAC TTGAATTACTTAAAAGCAGCTGGTAAGGCTTCTCGGAATGATGCAATGTCAAGAAGGCAT GCTTTTGAAAACTTTCTCCTTGCACATCTTGTTTCACTCTTCCAGGTTGCAAGTCAGGAC ACTTTTGGAACTTTGGGCGCCATTGTAAAACGGAGAACTGGCAACAAGCTGGTAGGTTTC GTCACCAACCGACATGTTGCTGTTGACTTGGACTACCCAAACCAGAAGATGTATCACCCA TTGCCACCCAACCTTGGGCCTGGTGTTTATCTTGGAGCTGTCGAAAGGGCAACATCTTTT ATCACGGATGATGTTTGGTATGGAATCTATGCTGGAACAAACCCAGAGACATTTGTACGT GCTGATGGGGCATTCATCCCATTTGCTCATGACTTTGACATCTCCACAGTCACAACTACA GTTAGGGGTGTTGGTGATATTGGGGATGTTAAGGTTATAGATCTGCAGTGTCCACTTAAT AGATTAATAGGGAGGCGAGTATGCAAAATCGGCAGAAGTTCTGGCCACACGACTGGAACT GTGATGGCTTATGCCCTTGAGTACAACGACGAGAAAGGAATAAGCTTTTTCACTGACCTC CTTGTCGTCGGTGAGAACCGCCAAACATTTGATCTAGAAGGTGACAGTGGAAGCCTCATT ATCCTGACTGGCCAGGACAGCGAGAAGCCGCGTCCCATCGGGATAATATGGGGTGGCACA GCAAACCGTGGGAGGCTAAAGCTTAGGTGTGACCATGGCCCTCAAAATTGGACCAGTGGA GTTGATCTTGGCCGCCTTCTGGATCGTCTTGAACTTGATCTTATCATAACCAGCGAATCA CTCAAAGATACTGGAAAATCCACTGTGATGTACGCTTCTGTTGCTTTTTGTTCCACGACA GATAACTGA