Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026291_T016
CDS Infomation

cds chromosome:B73_RefGen_v4:10:142983308:142987852:-1 gene:Zm00001d026291 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA methyl transferase2 description: DNA methyl transferase2
Sequence

ATGGATCCAAAAGCCAAGGCTCAGCTGATAGAGAGTTGCGACCTATACTATGACATGTCT
TACTCTGTTGCATATTCTACATTTGCTAATATCTCGTCTGAAAATGGGCAGTCAGACAGT
GATACCGCTTCGGGTATTTCTTCTGATGATGTGGATCTGGAGACGTCATCTAGTATGCCA
ACGAGGACAGCAACCCTTCTTGATCTGTATTCTGGCTGTGGGGGCATGTCTACTGGTCTT
TGCTTGGGTGCAGCTCTTTCTGGCTTGAAACTTGAAACTCGATGGGCTGTTGATTTCAAC
AGTTTTGCGTGCCAAAGTTTAAAATATAATCATCCACAGACTGAGGTGCGAAATGAGAAA
GCCGATGAGTTTCTTGCCCTCCTTAAGGAATGGGCAGTTCTATGCAAAAAATATGTCCAA
GATGTGGATTCAAATTTAGCAAGCTCAGAGGATCAAGCGGATGAAGACAGCCCTCTTGAC
AAGGACGAATTTGTTGTAGAGAAGCTTGTCGGGATATGTTATGGTGGCAGTGACAGGGAA
AATGGCATCTATTTTAAGGTCCAGTGGGAAGGATACGGCCCTGAGGAGGATACATGGGAA
CCGATTGATAACTTGAGTGACTGCCCGCAGAAAATTAGAGATTTTGTACAAGAAGGGCAC
AAAAGAAAGATTCTCCCACTGCCTGGTGATGTTGATGTCATTTGTGGAGGCCCACCATGC
CAAGGTATCAGTGGGTTTAATCGGTACAGAAACCGTGATGAGCCACTCAAAGATGAGAAA
AACAAACAAATGGTGACTTTCATGGATATTGTGGCGTACTTGAAGCCCAAGTATGTTCTC
ATGGAAAATGTGGTGGACATACTCAAATTTGCGGATGGTTACCTAGGAAAATATGCTTTG
AGCTGCCTTGTTGCTATGAAGTACCAAGCGCGGCTTGGAATGATGGTGGCTGGTTGCTAT
GGTCTGCCACAGTTCAGGATGCGTGTGTTCCTCTGGGGTGCTCTTTCTTCCATGGTGCTC
CCTAAGTATCCTCTGCCCACCTATGATGTTGTAGTACGTGGAGGAGCCCCTAATGCCTTT
TCGCAATGTATGGTTGCATATGACGAGACACAAAAACCATCCCTGAAAAAAGCCTTGCTT
CTTGGCGATGCAATTTCAGATTTACCAAAGGTTCAAAATCACCAGCCTAACGATGTGATG
GAGTATGGTGGTTCCCCCAAGACCGAATTCCAGCGCTACATTCGACTCAGTCGTAAAGAC
ATGTTGGATTGGTCCTTCGGTGAGGGGGCTGGTCCAGATGAAGGCAAGCTCTTGGATCAC
CAGCCTTTACGGCTTAACAACGATGATTATGAGCGGGTTCAACAGATTCCTGTCAAGAAG
GGAGCCAACTTCCGCGACCTAAAGGGCGTGAGGGTTGGAGCAAACAATATTGTTGAGTGG
GATCCAGAAATCGAGCGTGTGAAACTTTCATCTGGGAAACCACTGGTTCCTGACTATGCA
ATGTCATTCATCAAGGGCAAATCACTCAAGCCGTTTGGGCGCCTGTGGTGGGACGAGACA
GTTCCTACAGTTGTAACCAGAGCAGAGCCTCACAACCAGGTTATAATTCATCCGACTCAA
GCAAGGGTCCTCACTATCCGGGAGAACGCAAGGTTACAGGGCTTCCCCGATTACTACCGA
TTGTTTGGCCCGATCAAGGAGAAGTACATTCAAGTCGGGAACGCAGTGGCTGTCCCTGTT
GCCCGGGCACTGGGCTACTGTCTGGGGCAAGCCTACCTGGGTGAATCTGAGGGGAGTGAC
CCTCTGTACCAGCTGCCTCCAAGTTTCACCTCTGTTGGAGGACGCACTGCGGGGCAGGCG
AGGGCCTCTCCTGTTGGCACCCCTGCAGGGGAGGTAGTTGAGCAGTAA

Peptide Sequence

PEP ID

Zm00001d026291_P016
PEP Infomation

pep chromosome:B73_RefGen_v4:10:142983308:142987852:-1 gene:Zm00001d026291 transcript:Zm00001d026291_T016 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA methyl transferase2 description: DNA methyl transferase2
Sequence

MDPKAKAQLIESCDLYYDMSYSVAYSTFANISSENGQSDSDTASGISSDDVDLETSSSMP
TRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEK
ADEFLALLKEWAVLCKKYVQDVDSNLASSEDQADEDSPLDKDEFVVEKLVGICYGGSDRE
NGIYFKVQWEGYGPEEDTWEPIDNLSDCPQKIRDFVQEGHKRKILPLPGDVDVICGGPPC
QGISGFNRYRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYAL
SCLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAF
SQCMVAYDETQKPSLKKALLLGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKD
MLDWSFGEGAGPDEGKLLDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVRVGANNIVEW
DPEIERVKLSSGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQVIIHPTQ
ARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNAVAVPVARALGYCLGQAYLGESEGSD
PLYQLPPSFTSVGGRTAGQARASPVGTPAGEVVEQ

Transcript Sequence

Transcript ID

Zm00001d026291_T016
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:142983308:142987852:-1 gene:Zm00001d026291 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA methyl transferase2 description: DNA methyl transferase2
Sequence

GGTTATCAATTCTTTGGTGTCCATAAGTGTGGATGGCCACAAGCATGACCCTAGACGTGT
TTTTCTTTCTGAGGAAAAGAACGACAATGTGCTTGATTGCATTATCTCCAAGGTCAAGAT
AGTCCATGTTGATCCAAATATGGATCCAAAAGCCAAGGCTCAGCTGATAGAGAGTTGCGA
CCTATACTATGACATGTCTTACTCTGTTGCATATTCTACATTTGCTAATATCTCGTCTGA
AAATGGGCAGTCAGACAGTGATACCGCTTCGGGTATTTCTTCTGATGATGTGGATCTGGA
GACGTCATCTAGTATGCCAACGAGGACAGCAACCCTTCTTGATCTGTATTCTGGCTGTGG
GGGCATGTCTACTGGTCTTTGCTTGGGTGCAGCTCTTTCTGGCTTGAAACTTGAAACTCG
ATGGGCTGTTGATTTCAACAGTTTTGCGTGCCAAAGTTTAAAATATAATCATCCACAGAC
TGAGGTGCGAAATGAGAAAGCCGATGAGTTTCTTGCCCTCCTTAAGGAATGGGCAGTTCT
ATGCAAAAAATATGTCCAAGATGTGGATTCAAATTTAGCAAGCTCAGAGGATCAAGCGGA
TGAAGACAGCCCTCTTGACAAGGACGAATTTGTTGTAGAGAAGCTTGTCGGGATATGTTA
TGGTGGCAGTGACAGGGAAAATGGCATCTATTTTAAGGTCCAGTGGGAAGGATACGGCCC
TGAGGAGGATACATGGGAACCGATTGATAACTTGAGTGACTGCCCGCAGAAAATTAGAGA
TTTTGTACAAGAAGGGCACAAAAGAAAGATTCTCCCACTGCCTGGTGATGTTGATGTCAT
TTGTGGAGGCCCACCATGCCAAGGTATCAGTGGGTTTAATCGGTACAGAAACCGTGATGA
GCCACTCAAAGATGAGAAAAACAAACAAATGGTGACTTTCATGGATATTGTGGCGTACTT
GAAGCCCAAGTATGTTCTCATGGAAAATGTGGTGGACATACTCAAATTTGCGGATGGTTA
CCTAGGAAAATATGCTTTGAGCTGCCTTGTTGCTATGAAGTACCAAGCGCGGCTTGGAAT
GATGGTGGCTGGTTGCTATGGTCTGCCACAGTTCAGGATGCGTGTGTTCCTCTGGGGTGC
TCTTTCTTCCATGGTGCTCCCTAAGTATCCTCTGCCCACCTATGATGTTGTAGTACGTGG
AGGAGCCCCTAATGCCTTTTCGCAATGTATGGTTGCATATGACGAGACACAAAAACCATC
CCTGAAAAAAGCCTTGCTTCTTGGCGATGCAATTTCAGATTTACCAAAGGTTCAAAATCA
CCAGCCTAACGATGTGATGGAGTATGGTGGTTCCCCCAAGACCGAATTCCAGCGCTACAT
TCGACTCAGTCGTAAAGACATGTTGGATTGGTCCTTCGGTGAGGGGGCTGGTCCAGATGA
AGGCAAGCTCTTGGATCACCAGCCTTTACGGCTTAACAACGATGATTATGAGCGGGTTCA
ACAGATTCCTGTCAAGAAGGGAGCCAACTTCCGCGACCTAAAGGGCGTGAGGGTTGGAGC
AAACAATATTGTTGAGTGGGATCCAGAAATCGAGCGTGTGAAACTTTCATCTGGGAAACC
ACTGGTTCCTGACTATGCAATGTCATTCATCAAGGGCAAATCACTCAAGCCGTTTGGGCG
CCTGTGGTGGGACGAGACAGTTCCTACAGTTGTAACCAGAGCAGAGCCTCACAACCAGGT
TATAATTCATCCGACTCAAGCAAGGGTCCTCACTATCCGGGAGAACGCAAGGTTACAGGG
CTTCCCCGATTACTACCGATTGTTTGGCCCGATCAAGGAGAAGTACATTCAAGTCGGGAA
CGCAGTGGCTGTCCCTGTTGCCCGGGCACTGGGCTACTGTCTGGGGCAAGCCTACCTGGG
TGAATCTGAGGGGAGTGACCCTCTGTACCAGCTGCCTCCAAGTTTCACCTCTGTTGGAGG
ACGCACTGCGGGGCAGGCGAGGGCCTCTCCTGTTGGCACCCCTGCAGGGGAGGTAGTTGA
GCAGTAAAAGGATGACAGATCTGAGCTGAGCTGG