Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026270_T021
CDS Infomation

cds chromosome:B73_RefGen_v4:10:142462451:142472462:-1 gene:Zm00001d026270 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 9 description:RING/FYVE/PHD zinc finger superfamily protein
Sequence

ATGGCCGGGGACTCGTCCCCTTCCCCGGCCTCCGCACCTGTCCAGGTGCGCTGCGCTGGT
TGCCGTAGCATCCTCGCTGTCGGCCTCGGTGTAACTGAATTCATCTGCCCCAAGTGCCGC
ATGGCGCAGCGCCTCCCGCCACAGCTCATGGCCAAGTCCACCTCGCCCTCGTCGCCTCTG
CCCAAAGCCCCCTCGAAGCCTTCTCTGCCTCCTACGCAGCCCCGGATGGGTGCGCCGTCG
GCTCAGGGGGTGGACCCCACGAAGATCCAGCTCCCCTGTGCGGGCTGCCAGGCCGTCCTC
AACGTGCCCCACGGTCTCGCCCGCTTCCGCTGTCCGCAGTGTGGCGTCGACCTTGCCGTG
GACCACGCCAAGCTACAAAACTTCCTCGCCGCCTCCAACAGCGCCACGTCATCAGGCCAT
GCCCCGACCTCGGTGAGGACGCAGCCGCCTCTGGCGACATTCCTCTCCGTGTTGCCGCTG
CAGCTAGTGCCTGGTGCAACAATTTCCATGGTGCTGCCTGCCGCTGAACCACATGAGGAG
ATCAATGAGGTTGCCATTGATGTTGAGCGTGATGAAGATGAAGGTGGCACTGTTGGAGAA
ACTTTTACTGACTATAGGCCTTCCAAGCTATCACTTGGTCTATCTCATCCAGATCCAGTT
GTAGAAACTTCTTCTCTGTCAGCTGTACAACCTCCTGAACCAACTTACTGCTTGAATATC
ATGGACGAATTAGATGAGACAAATGCATTGTCTTGTTTGCAAATTGAAACAATAGTTTAT
GCTTGTCAGAGGCATCTTCATCATCTCCCTACTGGCCATAGAGCAGGTTTTTTCATTGGT
GATGGGGCTGGCGTTGGTAAGGGCCGAACAATTGCTGGGTTAATCTGGGAAAATTGGCAG
CAGGGAAGGCATAAAGCAGTGTGGGTATCTGTTGGTTCTGACTTAAAGTATGATGCTCGA
AGAGATTTGGATGATGTTGGTGCTAAGTGTGTCCAAGTGCACCCTTTAAATAAGTTACCT
TATTCTAAGCTAGATTCGAAGGCCATTGGAATTAAGAATGGAGTAATTTTTGTAACTTAT
AGTAGCCTAATAGCATCGTCTGAGAGAGGCCGCTCCCGTTTGCAGCAATTGGTTCAATGG
TGTGGGCAAGAGTTTGATGGTCTTCTTGTATTTGATGAGTGCCACAAGGCCAAAAATCTG
ATTCCTGATGCCGGAAGCCAGCCCACTCGCACTGGTAAAACAGTTCTTGAGATCCAGGAA
AAGTTGCACGAGGCTCGGGTTGTTTACTGTTCAGCAACTGGTGCATCAGAACCACGAAAT
TTGGGCTATATGGTTCGTCTTGGACTTTGGGGTGAAGGAACATCATTTCAAACTTTTCCA
CAATTTTTAGGTGCTCTTGAGAAAGGTGGTGTGGGAGCACTTGAACTTGTTGCCATGGAC
ATGAAAGCTAGGGGTATGTATGTATGCCGTACATTAAGTTACAAAGGGGCTGATTTTTAT
ATAGTGGAGGCTCCACTTGAGGAAAGAATGATGAACATGTACAGAAGAGCAGCTGAATTC
TGGGCTGAACTGCGCCTTGAACTTTTATCAGCAAGTGAATTATTTGCTGATGGCAATTCA
AATCAAATATGGCGATTGTATTGGGCCAGCCATCAGCGTTTCTTCAGGCACATGTGCATG
TCTGCAAAGGTACCTGCTGTTGTGAGGTTAGCTAAAGAGGCCTTGGCAGAGAACAAATGT
GTGGTGATTGGCCTTCAGAGCACTGGAGAAGCTAGAACTGAAGAAGCTGTCACAAAATAT
GGAGTTGAAATGGAAGACTTTGTTTCTGGCCCTCGGGAGCTTCTTCTTAAGTTGGTAGAA
GAAAACTACCCTTTACCTCCAAAACCTGATTCTTTTCAGCAAGGTGAAGAAACAGTCACA
GAGATTCAGCGTAAACGTGCACTGGATGTATCATTTAAAGGGCGAGTTAGGAAAGTAGCG
AAAGTGGTAGATGTGAGCGATGACGACACCGATGATTATTCTCCATCTGAGTCAGATCAT
GAATCAACAGAATCTGATGAGGAGTTCCACATGTGTCAAATTTGCAACACAGAGGAGGAG
CAGAGCCTGTTGCTTCATTGTTCTGGTTGTTCTCGGCATGTTCACCCTCATTGTCTAACA
CCACCATGGACTGGGACGATTACGGATGATTGGGCATGCTACACGTGCAAGATAGTAGAA
GACGAGGAAAAGAAGCAAGATGCCCATGTAGCTGATTGTTTAAAGAGAATTTCACTCCTC
ATGTCTATGAAGAGAATACCATGCTCTGGTGGAAAAGATGTAGTGATCAGTTGCATGGAA
TTGCCAGAAAAGGACTAA

Peptide Sequence

PEP ID

Zm00001d026270_P021
PEP Infomation

pep chromosome:B73_RefGen_v4:10:142462451:142472462:-1 gene:Zm00001d026270 transcript:Zm00001d026270_T021 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 9 description:RING/FYVE/PHD zinc finger superfamily protein
Sequence

MAGDSSPSPASAPVQVRCAGCRSILAVGLGVTEFICPKCRMAQRLPPQLMAKSTSPSSPL
PKAPSKPSLPPTQPRMGAPSAQGVDPTKIQLPCAGCQAVLNVPHGLARFRCPQCGVDLAV
DHAKLQNFLAASNSATSSGHAPTSVRTQPPLATFLSVLPLQLVPGATISMVLPAAEPHEE
INEVAIDVERDEDEGGTVGETFTDYRPSKLSLGLSHPDPVVETSSLSAVQPPEPTYCLNI
MDELDETNALSCLQIETIVYACQRHLHHLPTGHRAGFFIGDGAGVGKGRTIAGLIWENWQ
QGRHKAVWVSVGSDLKYDARRDLDDVGAKCVQVHPLNKLPYSKLDSKAIGIKNGVIFVTY
SSLIASSERGRSRLQQLVQWCGQEFDGLLVFDECHKAKNLIPDAGSQPTRTGKTVLEIQE
KLHEARVVYCSATGASEPRNLGYMVRLGLWGEGTSFQTFPQFLGALEKGGVGALELVAMD
MKARGMYVCRTLSYKGADFYIVEAPLEERMMNMYRRAAEFWAELRLELLSASELFADGNS
NQIWRLYWASHQRFFRHMCMSAKVPAVVRLAKEALAENKCVVIGLQSTGEARTEEAVTKY
GVEMEDFVSGPRELLLKLVEENYPLPPKPDSFQQGEETVTEIQRKRALDVSFKGRVRKVA
KVVDVSDDDTDDYSPSESDHESTESDEEFHMCQICNTEEEQSLLLHCSGCSRHVHPHCLT
PPWTGTITDDWACYTCKIVEDEEKKQDAHVADCLKRISLLMSMKRIPCSGGKDVVISCME
LPEKD

Transcript Sequence

Transcript ID

Zm00001d026270_T021
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:142462451:142472462:-1 gene:Zm00001d026270 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 9 description:RING/FYVE/PHD zinc finger superfamily protein
Sequence

TGGAGCATCTAACAACTAATACTTATTTGAGGGGTATAGCTAACAATCAGTTGATCCATT
CTAAACCTCTTGACTAATTTTAGCAACTAGCTATTAGTTATAAAGTTTTAGAACAAGACT
TTATACTATCTAAAACTTTGATTTTTTCTACACTTAATACTAAATAATCATTAGTCATAA
AAGGATGTACAAAACTGAGAGGGGGGCATGACCCACTTTACCTCTCCCTTGGATCCGCCT
CTGGTGAGGAGGTGTTGCCATACCCCTGTAAATGGTATGACCCGGAGCATGGTCTTATAC
TTGTTGTTTGACTTGTGACCGTTTGATTTCGGTTGAGAGCCAAGACCAGGATCGAGGGCT
GTACCTTTTTAAGCACTATTTTGAGCCACGTTGTTGGAAATCCTCTTAGACCGTCTCTAA
TGAACAACGTAAAATATGAGACACAGAACCGTAAATAACATGTTTGATAATGTTTTTAAA
ATAAAGTTTGGGACATTGCGATAAAATAGCGTTGAAGATAGCCTTGCATCGTGTTTCACT
TTCCCATTTGCCACCCAACAATTATCGAAATCTTCAAATACCGGCCCAGACCGACCATCC
CACTGGCTGTACCGTTTCGGCTTCTTTCTGCTCTTCCCGAGCGTGAAAGGAAACCGAGAC
CACCATACCCCCCCGCTCCGCTGCTCCGGAACCCTCGCCGTGAGGTCACCGCCGATGGCC
GGGGACTCGTCCCCTTCCCCGGCCTCCGCACCTGTCCAGGTGCGCTGCGCTGGTTGCCGT
AGCATCCTCGCTGTCGGCCTCGGTGTAACTGAATTCATCTGCCCCAAGTGCCGCATGGCG
CAGCGCCTCCCGCCACAGCTCATGGCCAAGTCCACCTCGCCCTCGTCGCCTCTGCCCAAA
GCCCCCTCGAAGCCTTCTCTGCCTCCTACGCAGCCCCGGATGGGTGCGCCGTCGGCTCAG
GGGGTGGACCCCACGAAGATCCAGCTCCCCTGTGCGGGCTGCCAGGCCGTCCTCAACGTG
CCCCACGGTCTCGCCCGCTTCCGCTGTCCGCAGTGTGGCGTCGACCTTGCCGTGGACCAC
GCCAAGCTACAAAACTTCCTCGCCGCCTCCAACAGCGCCACGTCATCAGGCCATGCCCCG
ACCTCGGTGAGGACGCAGCCGCCTCTGGCGACATTCCTCTCCGTGTTGCCGCTGCAGCTA
GTGCCTGGTGCAACAATTTCCATGGTGCTGCCTGCCGCTGAACCACATGAGGAGATCAAT
GAGGTTGCCATTGATGTTGAGCGTGATGAAGATGAAGGTGGCACTGTTGGAGAAACTTTT
ACTGACTATAGGCCTTCCAAGCTATCACTTGGTCTATCTCATCCAGATCCAGTTGTAGAA
ACTTCTTCTCTGTCAGCTGTACAACCTCCTGAACCAACTTACTGCTTGAATATCATGGAC
GAATTAGATGAGACAAATGCATTGTCTTGTTTGCAAATTGAAACAATAGTTTATGCTTGT
CAGAGGCATCTTCATCATCTCCCTACTGGCCATAGAGCAGGTTTTTTCATTGGTGATGGG
GCTGGCGTTGGTAAGGGCCGAACAATTGCTGGGTTAATCTGGGAAAATTGGCAGCAGGGA
AGGCATAAAGCAGTGTGGGTATCTGTTGGTTCTGACTTAAAGTATGATGCTCGAAGAGAT
TTGGATGATGTTGGTGCTAAGTGTGTCCAAGTGCACCCTTTAAATAAGTTACCTTATTCT
AAGCTAGATTCGAAGGCCATTGGAATTAAGAATGGAGTAATTTTTGTAACTTATAGTAGC
CTAATAGCATCGTCTGAGAGAGGCCGCTCCCGTTTGCAGCAATTGGTTCAATGGTGTGGG
CAAGAGTTTGATGGTCTTCTTGTATTTGATGAGTGCCACAAGGCCAAAAATCTGATTCCT
GATGCCGGAAGCCAGCCCACTCGCACTGGTAAAACAGTTCTTGAGATCCAGGAAAAGTTG
CACGAGGCTCGGGTTGTTTACTGTTCAGCAACTGGTGCATCAGAACCACGAAATTTGGGC
TATATGGTTCGTCTTGGACTTTGGGGTGAAGGAACATCATTTCAAACTTTTCCACAATTT
TTAGGTGCTCTTGAGAAAGGTGGTGTGGGAGCACTTGAACTTGTTGCCATGGACATGAAA
GCTAGGGGTATGTATGTATGCCGTACATTAAGTTACAAAGGGGCTGATTTTTATATAGTG
GAGGCTCCACTTGAGGAAAGAATGATGAACATGTACAGAAGAGCAGCTGAATTCTGGGCT
GAACTGCGCCTTGAACTTTTATCAGCAAGTGAATTATTTGCTGATGGCAATTCAAATCAA
ATATGGCGATTGTATTGGGCCAGCCATCAGCGTTTCTTCAGGCACATGTGCATGTCTGCA
AAGGTACCTGCTGTTGTGAGGTTAGCTAAAGAGGCCTTGGCAGAGAACAAATGTGTGGTG
ATTGGCCTTCAGAGCACTGGAGAAGCTAGAACTGAAGAAGCTGTCACAAAATATGGAGTT
GAAATGGAAGACTTTGTTTCTGGCCCTCGGGAGCTTCTTCTTAAGTTGGTAGAAGAAAAC
TACCCTTTACCTCCAAAACCTGATTCTTTTCAGCAAGGTGAAGAAACAGTCACAGAGATT
CAGCGTAAACGTGCACTGGATGTATCATTTAAAGGGCGAGTTAGGAAAGTAGCGAAAGTG
GTAGATGTGAGCGATGACGACACCGATGATTATTCTCCATCTGAGTCAGATCATGAATCA
ACAGAATCTGATGAGGAGTTCCACATGTGTCAAATTTGCAACACAGAGGAGGAGCAGAGC
CTGTTGCTTCATTGTTCTGGTTGTTCTCGGCATGTTCACCCTCATTGTCTAACACCACCA
TGGACTGGGACGATTACGGATGATTGGGCATGCTACACGTGCAAGATAGTAGAAGACGAG
GAAAAGAAGCAAGATGCCCATGTAGCTGATTGTTTAAAGAGAATTTCACTCCTCATGTCT
ATGAAGAGAATACCATGCTCTGGTGGAAAAGATGTAGTGATCAGTTGCATGGAATTGCCA
GAAAAGGACTAAACTCGCTTATCAGTCTCAGCCTCTGGATATTGTGGAAACACTGAAACG
TCTGTGTTTTTGACGGCCTTGCTCCCTGCCTTAATGAAGCCATCAAGAGAACTGACGAGG
AAAGGGACCTGTGGGTGTTAGGAGGGGCTACAAACTTAGATCTCTTAACAGCCCCAATCC
CAGGTCTTTAGGTCATAGT