Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026263_T015
CDS Infomation

cds chromosome:B73_RefGen_v4:10:142350710:142359035:1 gene:Zm00001d026263 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP88
Sequence

ATGGAACTGTTGACGCCAGAGTCCGATCTTGGTTATATGGTCACTCACATATCACTTAAC
ACTGATGGTTCATCACTGCTGCTTGTTGGATCACATAACTTAAATATCATGTATGTACAT
GAGAGGATATCTGAAGATGGGGATACAATCATATGCAGGACTGCACCGATTGCTTCTCAG
ATCCTACCCAGTGACAGTGATGGCATAAAAGTTCTCCAGGCATCTTGGCATCCCTTTAGC
AATAACCATTTTGCAGTTTTGACATCAGATGCTGTTTTCAGGTTATTTGATCTTTCATCC
GATTTAGAACAGCCAGAGCAGGGATTTTATTTGCAGCCAATTGTACCTGGGAAATGTCAA
AATGCTTCAGCGATTTGTCCAGTGGGTTTCTCTTATGGGAGCGATCATCTATGGGATAGA
TTTTCGGTTTTCATCTTATTCAGTGATGGTTCAATTTTTGTCCTCTGCCCAGTTGTTCCA
TTTGGAAGTGACTATAGCAAGAAGCATATTCAGGAAATATATGAAGATGTTAATGCATTT
GGATTGAAATCTTCAAATCCAAATGTTGTCACTAATTCACATTTGGCCATAGCTTGGTTG
GAGGCAACATTTCCTGACCTGTTACATCAATCAACAGATACCAGTTTTCTGATGTCAAAA
GCTCATGCATATGCGCCATTAGATGATTCTCTAACATTACAGGGGCCTCTTTGTACAGTT
TGTGAGGAAAGTAATGAATCTGAAAGCAAGAGCAGCAGTTGTGAAGGAAAAGCTGTAGGT
TTTATGTACAGTTCTGCTGGCAAAGATTCAGTTCTTGTGACTGCCTGGGGTAGTGGGCTG
CTTCAGGTTGATGCTCTTGCAGATGAAATTCAACCGCGGTGGAACATTGGGGTTCCTTCG
CGTCTTAATGTCGATTCACATGGACAAATAAATAATGTTGCCATGATATGTGACTCCAAT
TCGCAAGATCCATTGGCGTTGAGATCGCATCGACCATCTAGTACAGGATCAAACGTGAAG
AGCAACATAGAAGCTGTTTGGATGGGACACTCTCCTCCTTTGCTAAGGCTCGCAATTGTG
GATTTGGCATTACCAAAAACTCCTAATGATAACTCTCTGTCATTGTTTGCTGATCCCCTT
GTTCCAGAGAGATTTTATTGTGCGCATGGTGGGGGGCTTGACATGGTCACACTGCACTTC
CTACCATTTTCATACCCTGAAATGTCTTCGACACCACCCTCTGTGCATCCTGTCCTCACT
ACAGGGAACAGCGAAACAAGCTCACCTTTTCTTTCTGGATTTGTTACCATAGCTGATGCA
TATGGTCATGTACAGTTAGCTGGCATCACATGCTTGGGTGAGTGCTTTGTGGTGGAGATG
AAGGGTTGGAAGGAACCGGCACCTCTTCAGCTTGACTTAGAAAGCAAAATCGTCAAGGAT
GTGGAGCCTCCTGCAACTGGAATGATCAGCAAAGAACTTATTGCTGGTCCAGACCCACCC
ATACTTCCATCATCTTCAAGCCTGAAATCGTTGACCCCAGACTCTATTGAAGGAAAATCT
ACACTTCACCACTATATTAAGGTCTTCCATGAGTACTATGTGGAGTACGGACACAAGGTG
TTCATTGAACTCAAGGAGCATGCGGACTATTTGAAGACAGAAATGGAAGATAAACAGAAA
CGCTTGGAAGCAGTGAAGAAATCACTTATATCCGTAGAAGCCAAAGATGGAGACATCAAC
AAGAGGATAGATCGGGCCTTCAAGGTGTATGAACTGTTGGAGAAGCGAATAGATAGCTTC
AAGATGCTTCCTGCTGCAAACAAGAAACCATTAACCCAGGCAGAGCAGGAGTTCAAATCA
CAGCTTGATCGGTTCGCAGATGTGGAGCTGGATGCTTTGCGTTCCTCCATTGCCGCCCTG
AGTGCTAGGATGAAACGTTTTGCTCAGCAATCCACGGGCAGTGCGGCTAGCACAGGAATG
GTGCCATGGCAGGCACAAAGGGCTGGACGGAGCCATATCTCAGAATCCCAGATGTCACTT
CTGAAATCTTCGCTTGAGAAGCTCTCCCTCCTCAACGAAGAGAACAGTCTGAAGCTCCGG
CTTATTGATCATGAACTCAAGAACCAGGAACGATAG

Peptide Sequence

PEP ID

Zm00001d026263_P015
PEP Infomation

pep chromosome:B73_RefGen_v4:10:142350710:142359035:1 gene:Zm00001d026263 transcript:Zm00001d026263_T015 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP88
Sequence

MELLTPESDLGYMVTHISLNTDGSSLLLVGSHNLNIMYVHERISEDGDTIICRTAPIASQ
ILPSDSDGIKVLQASWHPFSNNHFAVLTSDAVFRLFDLSSDLEQPEQGFYLQPIVPGKCQ
NASAICPVGFSYGSDHLWDRFSVFILFSDGSIFVLCPVVPFGSDYSKKHIQEIYEDVNAF
GLKSSNPNVVTNSHLAIAWLEATFPDLLHQSTDTSFLMSKAHAYAPLDDSLTLQGPLCTV
CEESNESESKSSSCEGKAVGFMYSSAGKDSVLVTAWGSGLLQVDALADEIQPRWNIGVPS
RLNVDSHGQINNVAMICDSNSQDPLALRSHRPSSTGSNVKSNIEAVWMGHSPPLLRLAIV
DLALPKTPNDNSLSLFADPLVPERFYCAHGGGLDMVTLHFLPFSYPEMSSTPPSVHPVLT
TGNSETSSPFLSGFVTIADAYGHVQLAGITCLGECFVVEMKGWKEPAPLQLDLESKIVKD
VEPPATGMISKELIAGPDPPILPSSSSLKSLTPDSIEGKSTLHHYIKVFHEYYVEYGHKV
FIELKEHADYLKTEMEDKQKRLEAVKKSLISVEAKDGDINKRIDRAFKVYELLEKRIDSF
KMLPAANKKPLTQAEQEFKSQLDRFADVELDALRSSIAALSARMKRFAQQSTGSAASTGM
VPWQAQRAGRSHISESQMSLLKSSLEKLSLLNEENSLKLRLIDHELKNQER

Transcript Sequence

Transcript ID

Zm00001d026263_T015
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:142350710:142359035:1 gene:Zm00001d026263 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP88
Sequence

GTGACAAAGTGCGCCCAAGGGCGCGCCCCATCTACTAGTAACTAACTACACATGTCCAGA
GACCAGAGAGAGAGAGAGATTGAAGACGACGAAATGTAGGAGATTATCAGACGTTCTTGT
TTCCGTCTTTTTTGTCTATAACTAACAACAACGACTAACATGCAAGCAGATATTAGATAC
AAGCGTGCAAGCAGATTTTTTTCCTGTTAGATCTAAATCCAATGGTAGATATAATTATGG
TTTGTTAGGAGTTTTCTTATGGTGAAAGAGTTTAAGTGTTAAATATGACGTCGTTAGATC
TAGATTTAACAGAGTAAAATATCTACTTTCAGGCTTCTACCTAGTGCATGCTTGTATATT
AGTCTTCGCCGTAACTATATTACAGAGATATAGACATCACAAGGCTGCTGTCGTAGAGAT
GGGCCGAATTTCTCAATGGGCACACGACGTGTCGCCATGAGTTTTACACATGGGCCTATG
ACAGTTGGGTTTGTTGTACTGTTGACGTGTGTCCCAATTCGGGTAATCTCAATCAAAACT
GCTACATCTAGCCCAAATAACCTGCCCACGACCGCTCCACTGCACTCCTCGTCCTCGCCG
TCGCCGCCACCGCCACCGCCGATGACGCGCATCACCGCGCCGCCGCCACCTTCCTCGCCG
CCGGGGTCCCCGCCACCCATCCGCCACTCCCCAGCGCCGGCAACGCCGCCCTCTCGCCGC
CGCGGACGCCACTCGCCGTCCCCGTCTCTCGCGCTCACCCCTTCCTCCGCCTCCACCTCC
TCGAGGCCGAAGCCGCGGCCCGCTCCGAAGCGGGCCTACTCTCCGGCGCAGTGGGTGCCT
CTGAACTCCCACCCCGTGTTCTCCCGACGCGACGGCGACGGCGGCGGCGGGGACGCCGCG
TGGGACGCCGCGGCGTCGCGGCTGTACGCGTGGGACCCTTCAGCGTGCAGCGTCCACCGC
ATTGGCGTGCGGACTAGGGACCCGGACGCGGAGAATGGTGAGGTGGATGTGACCGTGGAA
TCTGCCGTGCCTTCCGAGGTGAGGCGTTTCTCGTTGTTTCTGCGTTTTGCTGCTAGTGCC
GTACTGCCGTGTGAAGTGCAAGGGATAGCATATCTTCGCCCCGTGTTCTATTTGATAGGG
ACGTATGTTTGAGGATTCAACCTAGAGACGAGCTTAATGTGCAAATCACTGCCACATCGA
TATCCAATTGGATAGTAAATCTTTGGGAAATTTGGATCCATACCATTAAAAGATCACCAC
TTTGGATCCATACCATTACTATCTCACTTACACGTGGGTCCACATGAGTCAATGACATGT
GGGGTCCATGGTATATATCTAAAGTTTGGATCTTTTAATGGTATAGATCCAATTGTTTCT
AAATCTTTCTGTTGGCGAGGTGTTGTGCAACTGTTTGCATTTCATATTTGTTTTTTAGTG
CTCTGAGGGGTATTAGAATTCAGATATTACTTTTTCCAAAGTGCTCAATCTACGGCCATT
GTTGTCTCTTGTTCTGAACTTATGGATCATGAGTCTATCATTGGAGTCGTGCCTGTAACA
ACACTACTTTTTTGCTCTATTATCTTCTGTGGTAGCTTGTATTTTCGAATTCGTAGAAGG
AATATGGGAAGCTTGTTTTCGAGCATCATGGCATCTTACAGTTGGGTAAAAGGGCTACTT
ACAAGGGCCTTTCCCCCCTCTTCCAATCTTGTTGAGTCATTCATAAAAACAGTTCAACAA
CACTAAGGGCCTGTTTGGATGAGCTAGGGCTAATACTAGTCGGGCTAAAAAATAACTCAA
ATTTCCTTAGTTTGGCTAGTTGGTTGGCTAACAACTAGTTGGAGACTTGGCTAAAAAATT
AGCCCATCTATTAGCCCTTTTGTTTGGATGCACTAGGGCTAATTTTAGCTAGCTAGTAAT
TAGCTCATGTATCTAAAATGCCCTAAGTTTCAACGAGGTCAGAGTGTTAGTTCAGTAAGT
GGTTAACTAGTGTTGTTGGGTAAAAGGATAACTTGTGGGTCAGTCTGGGATGCTCCGAGA
ATATTTGTAGCTGGTCGTCCTTAGCTCCAGAAAGTTTTGGAGCTGGATCCATATGCGGAT
TGGGGGTGGACTTTTAGTTGAGCCACTTTGTTGTTTTGTATTAAACACAGAAGTTTGGAC
CACTTTTATCTATCATACAAACTCCAAATCCTGCAAGGATCTTGGAGCTGGAGCTCTGCC
AGACAGCTCCGTAGCACTGTAGCAGTAGTTTGTTTGCAACATGAAAGTTACACAAGAAAC
TTGTGCTACCTATAGTGATTTGACTCCAACAAGGATGCAGCAGCTATCCCCATCCTTATT
ACTTTTGCAAATAAATTTATCGTATTCCCCGTTTATGCTGGTGTATTTGTGATATTCTTC
CTGGGAGCTGAAATTATGTTTAAAGCAATCTTCTGTCGACCCATTTGAATTTATCTTAGC
ACATTTGCTGCATCTTACCTCAGTTTTGTATATGGAACTGTTGACGCCAGAGTCCGATCT
TGGTTATATGGTCACTCACATATCACTTAACACTGATGGTTCATCACTGCTGCTTGTTGG
ATCACATAACTTAAATATCATGTATGTACATGAGAGGATATCTGAAGATGGGGATACAAT
CATATGCAGGACTGCACCGATTGCTTCTCAGATCCTACCCAGTGACAGTGATGGCATAAA
AGTTCTCCAGGCATCTTGGCATCCCTTTAGCAATAACCATTTTGCAGTTTTGACATCAGA
TGCTGTTTTCAGGTTATTTGATCTTTCATCCGATTTAGAACAGCCAGAGCAGGGATTTTA
TTTGCAGCCAATTGTACCTGGGAAATGTCAAAATGCTTCAGCGATTTGTCCAGTGGGTTT
CTCTTATGGGAGCGATCATCTATGGGATAGATTTTCGGTTTTCATCTTATTCAGTGATGG
TTCAATTTTTGTCCTCTGCCCAGTTGTTCCATTTGGAAGTGACTATAGCAAGAAGCATAT
TCAGGAAATATATGAAGATGTTAATGCATTTGGATTGAAATCTTCAAATCCAAATGTTGT
CACTAATTCACATTTGGCCATAGCTTGGTTGGAGGCAACATTTCCTGACCTGTTACATCA
ATCAACAGATACCAGTTTTCTGATGTCAAAAGCTCATGCATATGCGCCATTAGATGATTC
TCTAACATTACAGGGGCCTCTTTGTACAGTTTGTGAGGAAAGTAATGAATCTGAAAGCAA
GAGCAGCAGTTGTGAAGGAAAAGCTGTAGGTTTTATGTACAGTTCTGCTGGCAAAGATTC
AGTTCTTGTGACTGCCTGGGGTAGTGGGCTGCTTCAGGTTGATGCTCTTGCAGATGAAAT
TCAACCGCGGTGGAACATTGGGGTTCCTTCGCGTCTTAATGTCGATTCACATGGACAAAT
AAATAATGTTGCCATGATATGTGACTCCAATTCGCAAGATCCATTGGCGTTGAGATCGCA
TCGACCATCTAGTACAGGATCAAACGTGAAGAGCAACATAGAAGCTGTTTGGATGGGACA
CTCTCCTCCTTTGCTAAGGCTCGCAATTGTGGATTTGGCATTACCAAAAACTCCTAATGA
TAACTCTCTGTCATTGTTTGCTGATCCCCTTGTTCCAGAGAGATTTTATTGTGCGCATGG
TGGGGGGCTTGACATGGTCACACTGCACTTCCTACCATTTTCATACCCTGAAATGTCTTC
GACACCACCCTCTGTGCATCCTGTCCTCACTACAGGGAACAGCGAAACAAGCTCACCTTT
TCTTTCTGGATTTGTTACCATAGCTGATGCATATGGTCATGTACAGTTAGCTGGCATCAC
ATGCTTGGGTGAGTGCTTTGTGGTGGAGATGAAGGGTTGGAAGGAACCGGCACCTCTTCA
GCTTGACTTAGAAAGCAAAATCGTCAAGGATGTGGAGCCTCCTGCAACTGGAATGATCAG
CAAAGAACTTATTGCTGGTCCAGACCCACCCATACTTCCATCATCTTCAAGCCTGAAATC
GTTGACCCCAGACTCTATTGAAGGAAAATCTACACTTCACCACTATATTAAGGTCTTCCA
TGAGTACTATGTGGAGTACGGACACAAGGTGTTCATTGAACTCAAGGAGCATGCGGACTA
TTTGAAGACAGAAATGGAAGATAAACAGAAACGCTTGGAAGCAGTGAAGAAATCACTTAT
ATCCGTAGAAGCCAAAGATGGAGACATCAACAAGAGGATAGATCGGGCCTTCAAGGTGTA
TGAACTGTTGGAGAAGCGAATAGATAGCTTCAAGATGCTTCCTGCTGCAAACAAGAAACC
ATTAACCCAGGCAGAGCAGGAGTTCAAATCACAGCTTGATCGGTTCGCAGATGTGGAGCT
GGATGCTTTGCGTTCCTCCATTGCCGCCCTGAGTGCTAGGATGAAACGTTTTGCTCAGCA
ATCCACGGGCAGTGCGGCTAGCACAGGAATGGTGCCATGGCAGGCACAAAGGGCTGGACG
GAGCCATATCTCAGAATCCCAGATGTCACTTCTGAAATCTTCGCTTGAGAAGCTCTCCCT
CCTCAACGAAGAGAACAGTCTGAAGCTCCGGCTTATTGATCATGAACTCAAGAACCAGGA
ACGATAGGTTGGCAGGTCCATGTGCGACTTATTGCCATATTGGTATTTTGTTGTTCGGAC
ACTAAGTACAGGATCCATAGGAGCCTGTTTGCTGTCACTTTCTGTGGGGGGCTCGCGAAC
TGCATTTGCATGTCAGCGTGTTGTAAGTTGTAACTAGCAATACAGAACCAAGTGCAAACC
G