Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026241_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:141726352:141728004:-1 gene:Zm00001d026241 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand family protein

Sequence

ATGTCCTCGTCCAAGAAGTCTAGCTTCTTCGGCCGCGCGTGGGACAGAGCACGCGGCAAG
TCTGACGTCGAGAGGATCTGCAAGGAAGTCTTCGAGGACATGGCAGACAAGAACACGGGG
CTCCTGGACATCAACTCCCTCCACGTCGCCACCCTCATGGTTTACAATTCAATTAACAGG
CAGTTAATCGGCCCTCACAAGGACCCTCCCTGCATGAACACCATCGCCGAGAAAATGGAG
GAGTACCGCGCCAAGAAAGGGATACTGTTCACGGAGTTCCAGGAGATGATCCTCATGTGG
GTGCACAAGGACCTGCGGCTGGTGCTCGCCAACAAGGCCGCCGTCGCGATCCTGGGCGCG
CCGCTGCTCGCCGTCACGGCCAAGAACGCCGCCAGGCAGGTGCCGAGGATAAGCGACGCC
GTGGAGCAGGTGCCCACTCCGCTGCTCGCCGCCGTCTTCTCCGTCGGGCTCATGCTCCTG
CAGGACGTCCGGCTGGGCAAGCAGAGGGGGTGA

Peptide Sequence

PEP ID

Zm00001d026241_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:141726352:141728004:-1 gene:Zm00001d026241 transcript:Zm00001d026241_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand family protein

Sequence

MSSSKKSSFFGRAWDRARGKSDVERICKEVFEDMADKNTGLLDINSLHVATLMVYNSINR
QLIGPHKDPPCMNTIAEKMEEYRAKKGILFTEFQEMILMWVHKDLRLVLANKAAVAILGA
PLLAVTAKNAARQVPRISDAVEQVPTPLLAAVFSVGLMLLQDVRLGKQRG

Transcript Sequence

Transcript ID

Zm00001d026241_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:141726352:141728004:-1 gene:Zm00001d026241 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand family protein

Sequence

GCCATTAGCCAGTCGGCAGCCTTCTGATTCTGTTCTGCCCTTCCCTGCAAGCAAGCGAAG
CGACTTCTTCGTCAGACACTTGAAAAAGCTATTCCGCCACATTGATAATGCCACCGGCCG
ACCACCCTCCCTTCTCCAACTCGTCGTGTAGTTGGCTAGTTGCCATCAATCCAGATCTCG
AGGGAGCCAACGATGTCCTCGTCCAAGAAGTCTAGCTTCTTCGGCCGCGCGTGGGACAGA
GCACGCGGCAAGTCTGACGTCGAGAGGATCTGCAAGGAAGTCTTCGAGGACATGGCAGAC
AAGAACACGGGGCTCCTGGACATCAACTCCCTCCACGTCGCCACCCTCATGGTTTACAAT
TCAATTAACAGGCAGTTAATCGGCCCTCACAAGGACCCTCCCTGCATGAACACCATCGCC
GAGAAAATGGAGGAGTACCGCGCCAAGAAAGGGATACTGTTCACGGAGTTCCAGGAGATG
ATCCTCATGTGGGTGCACAAGGACCTGCGGCTGGTGCTCGCCAACAAGGCCGCCGTCGCG
ATCCTGGGCGCGCCGCTGCTCGCCGTCACGGCCAAGAACGCCGCCAGGCAGGTGCCGAGG
ATAAGCGACGCCGTGGAGCAGGTGCCCACTCCGCTGCTCGCCGCCGTCTTCTCCGTCGGG
CTCATGCTCCTGCAGGACGTCCGGCTGGGCAAGCAGAGGGGGTGAATCCATTACCGGAAT
CACCTCAAGGCGCACGCCTGGAGGTTTCGCTTTCACTGCCTCGCCGCAGTCTCACGGATG
TCAGGAACTCAGGAGTCAGGATATGGTCCCAGCCTCCCTAGTGCACATGAGCTTTTGATG
TGTGTAAGTTCACAAAAAAATCTGAAAAAAATTATATATATTATTACCACGCTACTCTGA
TTATATATACAATTCTAAATTTAAAATCG