Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d026158_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:140012416:140014572:-1 gene:Zm00001d026158 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAS-transcription factor 79 description:Scarecrow-like protein 6
Sequence	ATGAGGGCGGCGCCCTTCAGTGCCGACGGGAAAGGGGCGGGGACCATAGAGGCGCTGCTT TGGCCGAACGGGAAGGGCGGCGGCGGAGGGGACCTGCTGTTGGAGCCGACGTCGGTGCTG GACTGTAGACGGAGCCCGAGCCCGCGGTACTCGTCATCGACGCTGTCTTCGTCCCTGGGT GGCGCCGCGGGAGACTCCTCTTCCGGCGTGGCGGCGGTTTCGGAGAACAGCGCCGCCGCC GCCGCCGAAGCCACCAAATGGGCGGCGCCAGGCGAGCACCGCGGCGGCGGCGAAGGAGGC GGAGGCGGAGGAAGCAGGAAGGAGTGGTCCGGCGGTGAGCTGCCGCCCATACCGGGGACC CTGGACATCGGATTCGGCGCGGAGGAGGGCTGGGATGCCATGCTCGGCGACGCCGCGGCG GTGGTCGGGCAGGACCAGACATTCCTCAACTGGATCATGACCGCGCCGGGCGACATGGAA CCGCCGGCGCTGGCGCTCCTCGGTAATGCCGCCGGCTTCGAGTTCCCGGCCTCGGACCCG ATCGGGTTCTCCCTGCAGCATCACCCCACCGGCGGCGGCACCTCGGTTGGGGCGCTGGCC TCCGACCTATCGTCCCCCAGCGCGAGGTCGCTCACCAGCAGCAGCGGCAGCAGCAGTAAG GCCACTTCCACTTTCGGCCTCCTACGAACCGAGGCAGTTTTTCAGCCGCCGCCGCCGGCC ACGACCATGCCTTTCCACGACGGTGCCGACATAAAGCCCGCTCACCTTGGAGTCCCGTCG GCAAGTCTACTCCTCAATCAACACCAAGCGTTGTCAGCAGCCTCCTTCATGCCGCTCCCC TCCTTCCCTGACCATCAGCACCAGCCACATCTCCCGCCCCCGCCGAAGCGCCACCACTCT ATGCCCGAAAACCTGTTCCTCCTCCAAAACCAACTCCAGCCGCCGCCGCCGCCGCCGCAG GGTCTACGATTCCCACCACTGCATACCACCGCGCCCTTCCAGCTCCAACCATCGCTGCAA CCACCGCGAGGTTCGATGAAAACAACCCCGGCGGCGCAGCAACATCAACAGCTTCTGGAT GAGCTTGCGGCGGCGGCAAAAGCGGCTGAGGTCGGCAACTCCATCGGCGGGCGCGAGATA TTGGCGCGGCTCAATCAGCAGCTTCCCCCTATCGGGAAGCCTTTCCTCCGCTCCGCTTCC TACCTCAAGGAGGCCCTCCTCCTCGCGCTCACCGACGGCCACCAAGGCTCCACTCACCTA TCCTCCCCTCTCGACGTCGCCCTCAAGCTCGGTGCATACAAGTCCTTCTCCGACCTCTCG CCTGTGCTCCAGTTCGCCAATTTCACGGCCACTCAGGCGCTCCTCGACGAGATCGCCTCA ACAACTTCATCTTGTATCCACATTATTGATTTCGACCTTGGTGTTGGCGGCCAGTGGGCT TCCTTCTTGCAGGAGTTTGCACACCGCCGTGGAACTGGGAACGCCCCCCTGCCAATGTTG AAGCTCACAGCCTTCGTCTCAAGTGCTTCCCACCATCCCCTTGAGCTGCATCTTACTCGG GAGAACCTCACGCAATTTGCTGTGGACCTTGGCATTCCATTTGAGTTCACTGACATCAAT CTTGATGCGTTTGATCCGGCAGAATTCATTGCTCCTAGCCCCAATGAGGTTGTGGCTGTT TGCATCCCTGTTGGTTGCTCTGCACGCACGCCACCGCTCCCTATGTTGCTTCAGTTGGTG AAACAGCTTGCGCCTAAGATTGCTGTGGCTATTGACCATGGCAGTGACCGGGGTGACCTC CCATTTTCACAGCACTTCATGAACTGCTTCCAGTCTTGTATGTTCCTTCTCGACTCACTT GATGCTGCTGGCACTAACGCGGATGCTGCCAGTAAGATTGAGAGGTTTCTGATTCAACCG AGAGTAGAGGATGCAGTACTTGGCCGGCGGAAAGCTGAAAACGCAATGGCTTGGCGGGCA GTGTTTACATCGGCCGGGTTTGCTCCGGTACCGCTCAGCAACCTCGCAGAAGCACAAGCT GACTGCCTGTTGAAGCGCGTGCAGGTCCGAGGATTCCATGTGGAGAAGTGTGGAATGGGT CTAGCACTCTACTGGCAGAGCGGCGAGCTCGTGTCTGTCTCGGCATGGCGGTGCTGA

Peptide Sequence

PEP ID	Zm00001d026158_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:140012416:140014572:-1 gene:Zm00001d026158 transcript:Zm00001d026158_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAS-transcription factor 79 description:Scarecrow-like protein 6
Sequence	MRAAPFSADGKGAGTIEALLWPNGKGGGGGDLLLEPTSVLDCRRSPSPRYSSSTLSSSLG GAAGDSSSGVAAVSENSAAAAAEATKWAAPGEHRGGGEGGGGGGSRKEWSGGELPPIPGT LDIGFGAEEGWDAMLGDAAAVVGQDQTFLNWIMTAPGDMEPPALALLGNAAGFEFPASDP IGFSLQHHPTGGGTSVGALASDLSSPSARSLTSSSGSSSKATSTFGLLRTEAVFQPPPPA TTMPFHDGADIKPAHLGVPSASLLLNQHQALSAASFMPLPSFPDHQHQPHLPPPPKRHHS MPENLFLLQNQLQPPPPPPQGLRFPPLHTTAPFQLQPSLQPPRGSMKTTPAAQQHQQLLD ELAAAAKAAEVGNSIGGREILARLNQQLPPIGKPFLRSASYLKEALLLALTDGHQGSTHL SSPLDVALKLGAYKSFSDLSPVLQFANFTATQALLDEIASTTSSCIHIIDFDLGVGGQWA SFLQEFAHRRGTGNAPLPMLKLTAFVSSASHHPLELHLTRENLTQFAVDLGIPFEFTDIN LDAFDPAEFIAPSPNEVVAVCIPVGCSARTPPLPMLLQLVKQLAPKIAVAIDHGSDRGDL PFSQHFMNCFQSCMFLLDSLDAAGTNADAASKIERFLIQPRVEDAVLGRRKAENAMAWRA VFTSAGFAPVPLSNLAEAQADCLLKRVQVRGFHVEKCGMGLALYWQSGELVSVSAWRC

Transcript Sequence

Transcript ID	Zm00001d026158_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:140012416:140014572:-1 gene:Zm00001d026158 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAS-transcription factor 79 description:Scarecrow-like protein 6
Sequence	ATGAGGGCGGCGCCCTTCAGTGCCGACGGGAAAGGGGCGGGGACCATAGAGGCGCTGCTT TGGCCGAACGGGAAGGGCGGCGGCGGAGGGGACCTGCTGTTGGAGCCGACGTCGGTGCTG GACTGTAGACGGAGCCCGAGCCCGCGGTACTCGTCATCGACGCTGTCTTCGTCCCTGGGT GGCGCCGCGGGAGACTCCTCTTCCGGCGTGGCGGCGGTTTCGGAGAACAGCGCCGCCGCC GCCGCCGAAGCCACCAAATGGGCGGCGCCAGGCGAGCACCGCGGCGGCGGCGAAGGAGGC GGAGGCGGAGGAAGCAGGAAGGAGTGGTCCGGCGGTGAGCTGCCGCCCATACCGGGGACC CTGGACATCGGATTCGGCGCGGAGGAGGGCTGGGATGCCATGCTCGGCGACGCCGCGGCG GTGGTCGGGCAGGACCAGACATTCCTCAACTGGATCATGACCGCGCCGGGCGACATGGAA CCGCCGGCGCTGGCGCTCCTCGGTAATGCCGCCGGCTTCGAGTTCCCGGCCTCGGACCCG ATCGGGTTCTCCCTGCAGCATCACCCCACCGGCGGCGGCACCTCGGTTGGGGCGCTGGCC TCCGACCTATCGTCCCCCAGCGCGAGGTCGCTCACCAGCAGCAGCGGCAGCAGCAGTAAG GCCACTTCCACTTTCGGCCTCCTACGAACCGAGGCAGTTTTTCAGCCGCCGCCGCCGGCC ACGACCATGCCTTTCCACGACGGTGCCGACATAAAGCCCGCTCACCTTGGAGTCCCGTCG GCAAGTCTACTCCTCAATCAACACCAAGCGTTGTCAGCAGCCTCCTTCATGCCGCTCCCC TCCTTCCCTGACCATCAGCACCAGCCACATCTCCCGCCCCCGCCGAAGCGCCACCACTCT ATGCCCGAAAACCTGTTCCTCCTCCAAAACCAACTCCAGCCGCCGCCGCCGCCGCCGCAG GGTCTACGATTCCCACCACTGCATACCACCGCGCCCTTCCAGCTCCAACCATCGCTGCAA CCACCGCGAGGTTCGATGAAAACAACCCCGGCGGCGCAGCAACATCAACAGCTTCTGGAT GAGCTTGCGGCGGCGGCAAAAGCGGCTGAGGTCGGCAACTCCATCGGCGGGCGCGAGATA TTGGCGCGGCTCAATCAGCAGCTTCCCCCTATCGGGAAGCCTTTCCTCCGCTCCGCTTCC TACCTCAAGGAGGCCCTCCTCCTCGCGCTCACCGACGGCCACCAAGGCTCCACTCACCTA TCCTCCCCTCTCGACGTCGCCCTCAAGCTCGGTGCATACAAGTCCTTCTCCGACCTCTCG CCTGTGCTCCAGTTCGCCAATTTCACGGCCACTCAGGCGCTCCTCGACGAGATCGCCTCA ACAACTTCATCTTGTATCCACATTATTGATTTCGACCTTGGTGTTGGCGGCCAGTGGGCT TCCTTCTTGCAGGAGTTTGCACACCGCCGTGGAACTGGGAACGCCCCCCTGCCAATGTTG AAGCTCACAGCCTTCGTCTCAAGTGCTTCCCACCATCCCCTTGAGCTGCATCTTACTCGG GAGAACCTCACGCAATTTGCTGTGGACCTTGGCATTCCATTTGAGTTCACTGACATCAAT CTTGATGCGTTTGATCCGGCAGAATTCATTGCTCCTAGCCCCAATGAGGTTGTGGCTGTT TGCATCCCTGTTGGTTGCTCTGCACGCACGCCACCGCTCCCTATGTTGCTTCAGTTGGTG AAACAGCTTGCGCCTAAGATTGCTGTGGCTATTGACCATGGCAGTGACCGGGGTGACCTC CCATTTTCACAGCACTTCATGAACTGCTTCCAGTCTTGTATGTTCCTTCTCGACTCACTT GATGCTGCTGGCACTAACGCGGATGCTGCCAGTAAGATTGAGAGGTTTCTGATTCAACCG AGAGTAGAGGATGCAGTACTTGGCCGGCGGAAAGCTGAAAACGCAATGGCTTGGCGGGCA GTGTTTACATCGGCCGGGTTTGCTCCGGTACCGCTCAGCAACCTCGCAGAAGCACAAGCT GACTGCCTGTTGAAGCGCGTGCAGGTCCGAGGATTCCATGTGGAGAAGTGTGGAATGGGT CTAGCACTCTACTGGCAGAGCGGCGAGCTCGTGTCTGTCTCGGCATGGCGGTGCTGA