Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d026147_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:10:139781274:139790258:1 gene:Zm00001d026147 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:colored1 description: plant color component at R1
Sequence	ATGGCGCTTTCAGCTTCCCGAGTTCAGCAGGCGGAAGAACTGCTGCAACGACCTGCTGAG AGGCAGCTGATGAGGAGCCAGCTTGCTGCAGCCGCCAGGAGCATCAACTGGAGCTACGCC CTCTTCTGGTCCATTTCAGACACTCAACCAGGGGTGCTGACGTGGACGGACGGGTTCTAC AACGGCGAGGTGAAGACGCGGAAGATCTCCAACTCCGTGGAGCTGACATCCGACCACCTC GTCATGCAGAGGAGCGACCAGCTCCGGGAGCTCTACGAGGCCCTGCTGTCGGGCGAGGGC GACCGCCGCGCTGCGCCTGCGCGGCCGGCCGGCTCGCTGTCGCCGGAGGACCTCGGGGAC ACCGAGTGGTATTACGTGGTCTCCATGACCTACGCCTTCCGGCCAGGCCAAGGGTTGCCC GGCAGGAGTTTCGCGAGCGACGAGCATGTCTGGCTGTGCAACGCGCACCTCGCCGGCAGC AAAGCCTTCCCCCGCGCGCTCCTGGCCAAGAGCGCGTCCATTCAGTCAATCCTCTGCATC CCGGTTATGGGCGGCGTGCTTGAGCTTGGTACAACTGACACGGTGCCGGAGGCCCCGGAC TTGGTCAGCCGAGCAACCGCGGCTTTCTGGGAGCCGCAGTGCCCGACGTACTCGGAAGAG CCGAGCTCCAGCCCGTCAGGACGAGCAAACGAGACCGGCGAGGCCGCAGCAGACGACGGC ACGTTTGCGTTCGAGGAACTCGACCACAATAATGGCATGGACATAGAGGCGATGACCGCC GCCGGGGGACACGGGCAGGAGGAGGAGCTAAGACTAAGAGAAGCCGAGGCCCTGTCAGAC GACGCAAGCCTGGAGCACATCACCAAGGAGATCGAGGAGTTCTACAGCCTCTGCGACGAA ATGGACCTGCAGGCGCTACCACTACCGCTAGAGGACGGCTGGACCGTGGACGCGTCCAAT TTCGAGGTCCCCTGCTCTTCCCCGCAGCCAGCGCCGCCTCCGGTGGACAGGGCTACCGCT AACGTCGCCGCCGACGCCTCAAGGGCACCCGTCTACGGCTCTCGCGCGACGAGTTTCATG GCTTGGACGAGGTCCTCGCAGCAGTCGTCGTGCTCCGACGACGCGGCGCCCGCAGCAGTA GTGCCGGCCATCGAGGAGCCGCAGAGATTGCTGAAGAAAGTGGTGGCCGGCGGCGGTGCT TGGGAGAGCTGTGGCGGCGCGACGGGAGCAGCACAGGAAATGAGTGGCACTGGCACCAAG AACCACGTCATGTCGGAGCGAAAGCGACGAGAGAAGCTCAACGAGATGTTCCTCGTCCTC AAGTCACTGCTTCCGTCCATTCACAGGGTGAACAAAGCGTCGATCCTCGCCGAAACGATA GCCTACCTCAAGGAGCTTCAGAGAAGGGTGCAAGAGCTGGAGTCCAGTAGGGAACCTGCG TCGCGCCCATCCGAAACGACGACAAGGCTAATAACAAGGCCCTCCCGTGGCAATAATGAG AGTGTGAGGAAGGAGGTCTGCGCGGGCTCCAAGAGGAAGAGCCCAGAGCTCGGCAGAGAC GACGTGGAGCGCCCCCCGGTCCTCATCATGGACGCCGGCACCAGCAACGTCACCGTCACC GTCTCGGACAAGGACGTGCTCCTGGAGGTGCAGTGCCGGTGGGAGGAGCTCCTGATGACG CGAGTGTTCGACGCCATCAAGAGCCTCCATTTGGACGTCCTCTCGGTTCAGGCTTCAGCG CCAGATGGCTTCATGGGGCTTAAGATACGAGCTCAGTTTGCTGGCTCCGGTGCCGTCGTG CCCTGGATGATCAGCGAGGCTCTTCGCAAAGCTATAGGGAAGCGGTGA

Peptide Sequence

PEP ID	Zm00001d026147_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:10:139781274:139790258:1 gene:Zm00001d026147 transcript:Zm00001d026147_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:colored1 description: plant color component at R1
Sequence	MALSASRVQQAEELLQRPAERQLMRSQLAAAARSINWSYALFWSISDTQPGVLTWTDGFY NGEVKTRKISNSVELTSDHLVMQRSDQLRELYEALLSGEGDRRAAPARPAGSLSPEDLGD TEWYYVVSMTYAFRPGQGLPGRSFASDEHVWLCNAHLAGSKAFPRALLAKSASIQSILCI PVMGGVLELGTTDTVPEAPDLVSRATAAFWEPQCPTYSEEPSSSPSGRANETGEAAADDG TFAFEELDHNNGMDIEAMTAAGGHGQEEELRLREAEALSDDASLEHITKEIEEFYSLCDE MDLQALPLPLEDGWTVDASNFEVPCSSPQPAPPPVDRATANVAADASRAPVYGSRATSFM AWTRSSQQSSCSDDAAPAAVVPAIEEPQRLLKKVVAGGGAWESCGGATGAAQEMSGTGTK NHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELESSREPA SRPSETTTRLITRPSRGNNESVRKEVCAGSKRKSPELGRDDVERPPVLIMDAGTSNVTVT VSDKDVLLEVQCRWEELLMTRVFDAIKSLHLDVLSVQASAPDGFMGLKIRAQFAGSGAVV PWMISEALRKAIGKR

Transcript Sequence

Transcript ID	Zm00001d026147_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:139781274:139790258:1 gene:Zm00001d026147 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:colored1 description: plant color component at R1
Sequence	TAAGCAATATAATACTGATCTAGAATCGAGTTGTTGTACTCTTCGCAGATAGGCGCGTGA TGGCGCTTTCAGCTTCCCGAGTTCAGCAGGCGGAAGAACTGCTGCAACGACCTGCTGAGA GGCAGCTGATGAGGAGCCAGCTTGCTGCAGCCGCCAGGAGCATCAACTGGAGCTACGCCC TCTTCTGGTCCATTTCAGACACTCAACCAGGGGTGCTGACGTGGACGGACGGGTTCTACA ACGGCGAGGTGAAGACGCGGAAGATCTCCAACTCCGTGGAGCTGACATCCGACCACCTCG TCATGCAGAGGAGCGACCAGCTCCGGGAGCTCTACGAGGCCCTGCTGTCGGGCGAGGGCG ACCGCCGCGCTGCGCCTGCGCGGCCGGCCGGCTCGCTGTCGCCGGAGGACCTCGGGGACA CCGAGTGGTATTACGTGGTCTCCATGACCTACGCCTTCCGGCCAGGCCAAGGGTTGCCCG GCAGGAGTTTCGCGAGCGACGAGCATGTCTGGCTGTGCAACGCGCACCTCGCCGGCAGCA AAGCCTTCCCCCGCGCGCTCCTGGCCAAGAGCGCGTCCATTCAGTCAATCCTCTGCATCC CGGTTATGGGCGGCGTGCTTGAGCTTGGTACAACTGACACGGTGCCGGAGGCCCCGGACT TGGTCAGCCGAGCAACCGCGGCTTTCTGGGAGCCGCAGTGCCCGACGTACTCGGAAGAGC CGAGCTCCAGCCCGTCAGGACGAGCAAACGAGACCGGCGAGGCCGCAGCAGACGACGGCA CGTTTGCGTTCGAGGAACTCGACCACAATAATGGCATGGACATAGAGGCGATGACCGCCG CCGGGGGACACGGGCAGGAGGAGGAGCTAAGACTAAGAGAAGCCGAGGCCCTGTCAGACG ACGCAAGCCTGGAGCACATCACCAAGGAGATCGAGGAGTTCTACAGCCTCTGCGACGAAA TGGACCTGCAGGCGCTACCACTACCGCTAGAGGACGGCTGGACCGTGGACGCGTCCAATT TCGAGGTCCCCTGCTCTTCCCCGCAGCCAGCGCCGCCTCCGGTGGACAGGGCTACCGCTA ACGTCGCCGCCGACGCCTCAAGGGCACCCGTCTACGGCTCTCGCGCGACGAGTTTCATGG CTTGGACGAGGTCCTCGCAGCAGTCGTCGTGCTCCGACGACGCGGCGCCCGCAGCAGTAG TGCCGGCCATCGAGGAGCCGCAGAGATTGCTGAAGAAAGTGGTGGCCGGCGGCGGTGCTT GGGAGAGCTGTGGCGGCGCGACGGGAGCAGCACAGGAAATGAGTGGCACTGGCACCAAGA ACCACGTCATGTCGGAGCGAAAGCGACGAGAGAAGCTCAACGAGATGTTCCTCGTCCTCA AGTCACTGCTTCCGTCCATTCACAGGGTGAACAAAGCGTCGATCCTCGCCGAAACGATAG CCTACCTCAAGGAGCTTCAGAGAAGGGTGCAAGAGCTGGAGTCCAGTAGGGAACCTGCGT CGCGCCCATCCGAAACGACGACAAGGCTAATAACAAGGCCCTCCCGTGGCAATAATGAGA GTGTGAGGAAGGAGGTCTGCGCGGGCTCCAAGAGGAAGAGCCCAGAGCTCGGCAGAGACG ACGTGGAGCGCCCCCCGGTCCTCATCATGGACGCCGGCACCAGCAACGTCACCGTCACCG TCTCGGACAAGGACGTGCTCCTGGAGGTGCAGTGCCGGTGGGAGGAGCTCCTGATGACGC GAGTGTTCGACGCCATCAAGAGCCTCCATTTGGACGTCCTCTCGGTTCAGGCTTCAGCGC CAGATGGCTTCATGGGGCTTAAGATACGAGCTCAGTTTGCTGGCTCCGGTGCCGTCGTGC CCTGGATGATCAGCGAGGCTCTTCGCAAAGCTATAGGGAAGCGGTGAAGGGGCAGCTGGA AATTTGGACATCGACGGGCATGGAAGGCTTCATGGGATCGAAGCAAAGATGTATTTCTTG TTTCTTTAGATAACAGACATGAATCGGACCTCTATATCAACAATTATATTGGCATGAATA CTTAGACTCCAGCCCTTAACACGTAGAAACTCAAAAAAAGAAGAAAGGAAGCTAAAGACT AAGCGTAAGGTATATTTGGAAGTAAATTGTTTTTATAGTTTCTAAGCAATCCCATGGTTT ATAGGAATGCTAGAGTGTTTATTTATGGCATAAGGTGTTTGGTTGCATTCATAAAAACTA TATTTTCAAAGTCATAGCATTCTAGATACATGATATTTTTGTAATATTGGAAACTACACT CCAACGCAAAGTTTTTATG