Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026139_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:10:139500543:139503204:1 gene:Zm00001d026139 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative calcium-dependent protein kinase family protein

Sequence

ATGGGCAACTGCTTCACCAGGAAGTACGACGTCCTCACCGTCGTCAACGTCTGCCACTTC
ATGGGGGTCATGCACCGCGACCTCAAGCCCGAGAACTTCCTGCTCGCCAGCCCCGCCGAC
GACGCGCCGCTCAAGGCCATCGACTTCGGCCTCTCCGTCTTCATCGAAGAAGGCAAAGTT
TACAAGGACTTGGTGGGGAGCGCGTACTACGTGGCGCCCGAGGTGTTGCGCCGGAACTAC
GGCAGGGAGATCGACGTCTGGAGTGCTGGCGTGATCCTATACATCCTTCTATGCGGGTCG
CCGCCTTTCTGGGAAGAAACGCAGAAAGGCATATTTGACGCAATATTGGCCGACGAGCTC
GATCTGGTCTCCTCCCCGTGGCCCTCCATATCTGAAAGCGCGAAGGATCTCATTAGAAAA
ATGCTGAACAGGGACCCTCAGAGGCGCATTACGGCTTCACAGGCCCTAGAACATCCATGG
CTCAAAGGTGGTGCACCTGACAGGCCTATCGACAGCGCGGTCCTGTCAAGAATGAAGCAG
TTCAAGGCGATGAACAAGCTAAAGCAACTTGCACTGAAGGTAATCGCAGAGAACCTAACA
GAGGATGAGATCAAGGGGCTGAAGCAGATGTTCAACAACATGGATACAGACAGGAGCGGC
ACGATCACGGTCGAGGAACTCAAGGACGGGCTGGCGAAGCTCGGGTCCAAGATTAGCGAA
GCGGAGGTTCAGAAGCTTATGGAAGCAGTTGACGTGGACAAGAGTGGCAGCATTGACTAC
ACCGAGTTCCTCACTGCCATGATGAACAGGCATAAACTGGAGAAGGAGGAGGATTTGTTC
CTTGCTTTTCAACACTTCGACAAAGACGATAGCGGGTACATAACAAGAGACGAACTGGAA
CAAGCCATGGCGGAGTATGGGGTGGGTGATGAAGCAAGCATTAAGGAAGTGCTGGACGAA
GTTGATAAAGACAAGGATGGGAGAATCGACTACGAAGAGTTTGTAGAAATGATGAGGAAG
GGAAGTTATACCTGA

Peptide Sequence

PEP ID

Zm00001d026139_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:10:139500543:139503204:1 gene:Zm00001d026139 transcript:Zm00001d026139_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative calcium-dependent protein kinase family protein

Sequence

MGNCFTRKYDVLTVVNVCHFMGVMHRDLKPENFLLASPADDAPLKAIDFGLSVFIEEGKV
YKDLVGSAYYVAPEVLRRNYGREIDVWSAGVILYILLCGSPPFWEETQKGIFDAILADEL
DLVSSPWPSISESAKDLIRKMLNRDPQRRITASQALEHPWLKGGAPDRPIDSAVLSRMKQ
FKAMNKLKQLALKVIAENLTEDEIKGLKQMFNNMDTDRSGTITVEELKDGLAKLGSKISE
AEVQKLMEAVDVDKSGSIDYTEFLTAMMNRHKLEKEEDLFLAFQHFDKDDSGYITRDELE
QAMAEYGVGDEASIKEVLDEVDKDKDGRIDYEEFVEMMRKGSYT

Transcript Sequence

Transcript ID

Zm00001d026139_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:139500543:139503204:1 gene:Zm00001d026139 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative calcium-dependent protein kinase family protein

Sequence

GCCAAGCTTTGCAGGCAGCCTTCTTCATATCCTCGTTCTCCATCCTCTGCTCCCAAAAGG
AGCTAGCGCTAGCTAGGAAACACACAGAGAGACGAAATAAGCAGCGAGGCAATGGGCAAC
TGCTTCACCAGGAAGTACGACGTCCTCACCGTCGTCAACGTCTGCCACTTCATGGGGGTC
ATGCACCGCGACCTCAAGCCCGAGAACTTCCTGCTCGCCAGCCCCGCCGACGACGCGCCG
CTCAAGGCCATCGACTTCGGCCTCTCCGTCTTCATCGAAGAAGGCAAAGTTTACAAGGAC
TTGGTGGGGAGCGCGTACTACGTGGCGCCCGAGGTGTTGCGCCGGAACTACGGCAGGGAG
ATCGACGTCTGGAGTGCTGGCGTGATCCTATACATCCTTCTATGCGGGTCGCCGCCTTTC
TGGGAAGAAACGCAGAAAGGCATATTTGACGCAATATTGGCCGACGAGCTCGATCTGGTC
TCCTCCCCGTGGCCCTCCATATCTGAAAGCGCGAAGGATCTCATTAGAAAAATGCTGAAC
AGGGACCCTCAGAGGCGCATTACGGCTTCACAGGCCCTAGAACATCCATGGCTCAAAGGT
GGTGCACCTGACAGGCCTATCGACAGCGCGGTCCTGTCAAGAATGAAGCAGTTCAAGGCG
ATGAACAAGCTAAAGCAACTTGCACTGAAGGTAATCGCAGAGAACCTAACAGAGGATGAG
ATCAAGGGGCTGAAGCAGATGTTCAACAACATGGATACAGACAGGAGCGGCACGATCACG
GTCGAGGAACTCAAGGACGGGCTGGCGAAGCTCGGGTCCAAGATTAGCGAAGCGGAGGTT
CAGAAGCTTATGGAAGCAGTTGACGTGGACAAGAGTGGCAGCATTGACTACACCGAGTTC
CTCACTGCCATGATGAACAGGCATAAACTGGAGAAGGAGGAGGATTTGTTCCTTGCTTTT
CAACACTTCGACAAAGACGATAGCGGGTACATAACAAGAGACGAACTGGAACAAGCCATG
GCGGAGTATGGGGTGGGTGATGAAGCAAGCATTAAGGAAGTGCTGGACGAAGTTGATAAA
GACAAGGATGGGAGAATCGACTACGAAGAGTTTGTAGAAATGATGAGGAAGGGAAGTTAT
ACCTGAGGAAGCTCTGTTCTCATGGTGGGAGAGGTTGTGTATATATGTTTCAGCAAATGT
GTCAAGTACAAGCAACGAAGCAAGTTTAACTTAGAACAAGTTGCTTCTGCAGCTATGGTC
CGAGGCAAGCATGTACAGCTATTTATTTATTGACCGAATATGCAACGAGAGAGAAAATGT
CCAGTTTACTT