Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026111_T088
CDS Infomation

cds chromosome:B73_RefGen_v4:10:138703215:138707987:1 gene:Zm00001d026111 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:argonaute1b description: argonaute1b
Sequence

ATGGAGACTTATGGTTTTAGTATCCAGCACACCACTTTACCATGCTTGCAAGTGGGTAAT
CAACAAAGACCAAATTATCTGCCTATGGAGGTTTGCAAGATAGTTGAAGGACAGCGTTAC
TCAAAGCGACTCAATGAGAAACAAATCACTGCTCTACTGAAAGTGACCTGCCAGCGCCCT
CAAGAGCGCGAGCTGGACATCTTACAGACTGTGCATCACAATGCATACTATGAAGACCCC
TATGCACTGGAATTTGGTATAAGAATTGATGAACGTCTTGCTGCAGTTGAAGCTCGTGTT
CTGCCACCACCAAGACTTAAATACCATGATAGTGGCCGAGAGAAGGATGTTTTGCCCAGA
GTTGGCCAATGGAACATGATGAATAAGAAAATGGTTAATGGTGGCAGAGTGAGCAACTGG
GCATGTATTAACTTCTCTCGGAATGTGCAAGATAGTGCCGCTAGGGGTTTCTCTCATGAG
TTGGCAGTCATGTGCCAAATATCAGGAATGGATTTTGCTCTTGAGCCTGTGCTGCCTCCA
GTGACTGCAAGGCCAGAACATGTTGAGAGAGCGTTAAAGGCACGTTATCAAGATGCAATG
AACATACTGAGGCCACAGGGAAGGGAACTTGATCTGCTGATCGTAATACTGCCTGACAAC
AATGGTTCTCTTTATGGGGATCTCAAAAGGATCTGTGAGACTGAACTCGGATTGGTCTCC
CAGTGTTGTCTGACTAAACATGTTTTTAAGATGAGCAAGCAGTACCTTGCAAATGTTGCA
CTCAAAATAAATGTTAAGGTTGGGGGAAGGAATACTGTACTTTTAGATGCTTTGTCAAGG
AGAATCCCCCTTGTCAGTGACAGACCGACCATAATATTTGGTGCTGATGTTACCCATCCA
CATCCTGGAGAAGATTCCAGTCCTTCCATTGCAGCCGTTGTTGCTTCGCAAGACTGGCCC
GAGGTCACGAAATACGCTGGACTAGTGAGTGCGCAAGCCCATCGCCAGGAGCTGATACAG
GATCTTTTCAAAGTATGGCAGGACCCGCAGAGAAGGACGGTAACTGGCGGCATGATAAAG
GAACTTCTCATTTCTTTCAAGAGGGCAACTGGACAGAAGCCCCAGAGGATCATATTCTAC
AGGGATGGTGTCAGTGAGGGACAGTTCTATCAAGTATTGCTGTACGAACTTGATGCCATT
AGAAAGGCCTGTGCGTCCCTGGAGCCCAACTACCAGCCTCCAGTTACTTTTGTCGTGGTA
CAGAAGCGCCATCACACTAGGCTGTTTGCGAACAACCACAGTGATCAGCGCACAGTCGAT
AGAAGCGGAAACATACTGCCTGGCACCGTGGTCGATTCGAAGATTTGCCATCCTACTGAG
TTTGACTTCTACCTGTGTAGCCATGCTGGCATTCAGGGAACGAGCCGCCCTGCTCACTAC
CATGTCCTGTGGGACGAGAACAAGTTCACAGCTGACGAGCTGCAGACCCTGACGAACAAC
CTGTGCTACACGTAA

Peptide Sequence

PEP ID

Zm00001d026111_P088
PEP Infomation

pep chromosome:B73_RefGen_v4:10:138703215:138707987:1 gene:Zm00001d026111 transcript:Zm00001d026111_T088 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:argonaute1b description: argonaute1b
Sequence

METYGFSIQHTTLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRP
QERELDILQTVHHNAYYEDPYALEFGIRIDERLAAVEARVLPPPRLKYHDSGREKDVLPR
VGQWNMMNKKMVNGGRVSNWACINFSRNVQDSAARGFSHELAVMCQISGMDFALEPVLPP
VTARPEHVERALKARYQDAMNILRPQGRELDLLIVILPDNNGSLYGDLKRICETELGLVS
QCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLLDALSRRIPLVSDRPTIIFGADVTHP
HPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWQDPQRRTVTGGMIK
ELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVV
QKRHHTRLFANNHSDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHY
HVLWDENKFTADELQTLTNNLCYT

Transcript Sequence

Transcript ID

Zm00001d026111_T088
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:138703215:138707987:1 gene:Zm00001d026111 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:argonaute1b description: argonaute1b
Sequence

GGCCTCACCTCACAAGCAACAAGAGAGCTATCATTCCCTGTTGATGATCGTGGTACTGTG
AAGACTGTGGTGCAATACTTCATGGAGACTTATGGTTTTAGTATCCAGCACACCACTTTA
CCATGCTTGCAAGTGGGTAATCAACAAAGACCAAATTATCTGCCTATGGAGGTTTGCAAG
ATAGTTGAAGGACAGCGTTACTCAAAGCGACTCAATGAGAAACAAATCACTGCTCTACTG
AAAGTGACCTGCCAGCGCCCTCAAGAGCGCGAGCTGGACATCTTACAGACTGTGCATCAC
AATGCATACTATGAAGACCCCTATGCACTGGAATTTGGTATAAGAATTGATGAACGTCTT
GCTGCAGTTGAAGCTCGTGTTCTGCCACCACCAAGACTTAAATACCATGATAGTGGCCGA
GAGAAGGATGTTTTGCCCAGAGTTGGCCAATGGAACATGATGAATAAGAAAATGGTTAAT
GGTGGCAGAGTGAGCAACTGGGCATGTATTAACTTCTCTCGGAATGTGCAAGATAGTGCC
GCTAGGGGTTTCTCTCATGAGTTGGCAGTCATGTGCCAAATATCAGGAATGGATTTTGCT
CTTGAGCCTGTGCTGCCTCCAGTGACTGCAAGGCCAGAACATGTTGAGAGAGCGTTAAAG
GCACGTTATCAAGATGCAATGAACATACTGAGGCCACAGGGAAGGGAACTTGATCTGCTG
ATCGTAATACTGCCTGACAACAATGGTTCTCTTTATGGGGATCTCAAAAGGATCTGTGAG
ACTGAACTCGGATTGGTCTCCCAGTGTTGTCTGACTAAACATGTTTTTAAGATGAGCAAG
CAGTACCTTGCAAATGTTGCACTCAAAATAAATGTTAAGGTTGGGGGAAGGAATACTGTA
CTTTTAGATGCTTTGTCAAGGAGAATCCCCCTTGTCAGTGACAGACCGACCATAATATTT
GGTGCTGATGTTACCCATCCACATCCTGGAGAAGATTCCAGTCCTTCCATTGCAGCCGTT
GTTGCTTCGCAAGACTGGCCCGAGGTCACGAAATACGCTGGACTAGTGAGTGCGCAAGCC
CATCGCCAGGAGCTGATACAGGATCTTTTCAAAGTATGGCAGGACCCGCAGAGAAGGACG
GTAACTGGCGGCATGATAAAGGAACTTCTCATTTCTTTCAAGAGGGCAACTGGACAGAAG
CCCCAGAGGATCATATTCTACAGGGATGGTGTCAGTGAGGGACAGTTCTATCAAGTATTG
CTGTACGAACTTGATGCCATTAGAAAGGCCTGTGCGTCCCTGGAGCCCAACTACCAGCCT
CCAGTTACTTTTGTCGTGGTACAGAAGCGCCATCACACTAGGCTGTTTGCGAACAACCAC
AGTGATCAGCGCACAGTCGATAGAAGCGGAAACATACTGCCTGGCACCGTGGTCGATTCG
AAGATTTGCCATCCTACTGAGTTTGACTTCTACCTGTGTAGCCATGCTGGCATTCAGGGA
ACGAGCCGCCCTGCTCACTACCATGTCCTGTGGGACGAGAACAAGTTCACAGCTGACGAG
CTGCAGACCCTGACGAACAACCTGTGCTACACGTAACACATCTGCTGCTCCACCAATCCT
TTATTTCCCGCGCACTCGTTAACTGCCTGTTATTTATTAAGCATTGTTCCCGCTTCTGCA
GGTACGCTAGGTGCACCCGCTCCGTGTCCATCGTGCCCCCGGCGTACTACGCTCATCTGG
CAGCCTTCCGAGCTCGCTTCTACATGGAGCCAGACACCTCTGACAGCGGGTCACTGGCCA
GCGGTGCCCGTGGCCCCCCACCCGGTGCGGCACGCAGCAGCACGAGAGGGGCCGGGAGTG
TCGAGGTCAGGCCCCTACCTGCTCTCAAGGAGAACGTGAAGCGTGTCATGTTTTACTGCT
GAGACGCTGGTGGGCTGCCTTCGCCAAGGAAAATGCCCTGGAGCATTCCCATGTACCCGC
ACTGTTTCGGTGATACAGTACTATCTAACGCCGATTTTGCGCGTTAAGACTTCCAGTGAT
CTGGGAAATTT