Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d026064_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:10:137390002:137394809:-1 gene:Zm00001d026064 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyprenol reductase 2
Sequence

ATGGCGCTGCGTGGCAGCATCCAAATGGATACGGGAAGCGGGCCCGCGCTCCAGTACCTC
CTGTGCCTCGCCTGGGTCGCGGCGACCCTCCCCATCGCCGCCGCCGCGCTGCCGATCCCC
GCGGCCGCTGGCGGCAGGTTCATCCACGGCCTGCTCTGCGCCTTCTCGTCCCGCGGGAAG
ACAGTCAGGCCCTCGTCCTCGTCCTCGTCCAAGGCGAGGTTCACCGTTTCACAAAAATGC
TTCTTGCATTTTTACGTGGTGGGTGCGGTTGTGACGACTAGCTTGCTACTTGCAATATGG
TTCTATGCATACATGAAAATGACACCTTTGATGCCAGAACAATCGAGTTACTCCACAATT
GCTAGTCATCTTGTTGGTGGTTCAAATTCATTCCATTTGGCAAATTTCTGGTCATCACGC
CCCATGGAACACAAGTATCGTGTCTGGCGTACTGTATTTGTACTTATATTGATGGAAATT
CAGGTCCTGAGACGCCTATATGAGACTGAACATGTCTTCCACTACAGTCCTTCAGCTCAA
ATGCACATCATAGGATACCTAACGGGTATTTTCTACTATGTGGCCGCACCTTTATCACTT
GCTAGTTCTTGTCTTCCTGAAGCAATACAGTATCTTCGATATCAAATAGCTGAGTTCATA
GTGAAGGGTAGAGCAAGAATGCCAGATCTATCAATTGACCCATCACATCTCTTGAAGCCT
CTTCTAAAGTTGGGGTGGTGCCAGTGGATTGGTGCTGTTATTTTCATCTGGGGCTCACTC
CATCAGATCCGCTGCCATGCAATTCTTGGATCATTGCGTGAACACAAAGATTCTGATGAA
TATGTAATTCCGTGCGGTGACTGGTTTAGTCTAGTGTCTTGCCCTCATTACCTTGCTGAA
CTAGTGAGTTCCTACTCTCTTCCAGTCATAACTAATATCCAGGATGTTGCACATACTGAT
GAATATGGAAGATCCCACTAA

Peptide Sequence

PEP ID

Zm00001d026064_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:10:137390002:137394809:-1 gene:Zm00001d026064 transcript:Zm00001d026064_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyprenol reductase 2
Sequence

MALRGSIQMDTGSGPALQYLLCLAWVAATLPIAAAALPIPAAAGGRFIHGLLCAFSSRGK
TVRPSSSSSSKARFTVSQKCFLHFYVVGAVVTTSLLLAIWFYAYMKMTPLMPEQSSYSTI
ASHLVGGSNSFHLANFWSSRPMEHKYRVWRTVFVLILMEIQVLRRLYETEHVFHYSPSAQ
MHIIGYLTGIFYYVAAPLSLASSCLPEAIQYLRYQIAEFIVKGRARMPDLSIDPSHLLKP
LLKLGWCQWIGAVIFIWGSLHQIRCHAILGSLREHKDSDEYVIPCGDWFSLVSCPHYLAE
LVSSYSLPVITNIQDVAHTDEYGRSH

Transcript Sequence

Transcript ID

Zm00001d026064_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:137390002:137394809:-1 gene:Zm00001d026064 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polyprenol reductase 2
Sequence

GATCTAAAACCTCCCCGCCACGCGAAGCAAAATCGCGTGCCTTCCCCCGACAGATTCACT
TCCCTCCTTCCCACTCCAAGCACCAAGCTACCAACCCGAACTGCCTCACGGCCGCGCCGG
TCACTGCCTCCGCCGCGCCGCGTCGCCACTCGCCACCCCGCGCGCACTAGTCTTTGCCAT
GGCGCTGCGTGGCAGCATCCAAATGGATACGGGAAGCGGGCCCGCGCTCCAGTACCTCCT
GTGCCTCGCCTGGGTCGCGGCGACCCTCCCCATCGCCGCCGCCGCGCTGCCGATCCCCGC
GGCCGCTGGCGGCAGGTTCATCCACGGCCTGCTCTGCGCCTTCTCGTCCCGCGGGAAGAC
AGTCAGGCCCTCGTCCTCGTCCTCGTCCAAGGCGAGGTTCACCGTTTCACAAAAATGCTT
CTTGCATTTTTACGTGGTGGGTGCGGTTGTGACGACTAGCTTGCTACTTGCAATATGGTT
CTATGCATACATGAAAATGACACCTTTGATGCCAGAACAATCGAGTTACTCCACAATTGC
TAGTCATCTTGTTGGTGGTTCAAATTCATTCCATTTGGCAAATTTCTGGTCATCACGCCC
CATGGAACACAAGTATCGTGTCTGGCGTACTGTATTTGTACTTATATTGATGGAAATTCA
GGTCCTGAGACGCCTATATGAGACTGAACATGTCTTCCACTACAGTCCTTCAGCTCAAAT
GCACATCATAGGATACCTAACGGGTATTTTCTACTATGTGGCCGCACCTTTATCACTTGC
TAGTTCTTGTCTTCCTGAAGCAATACAGTATCTTCGATATCAAATAGCTGAGTTCATAGT
GAAGGGTAGAGCAAGAATGCCAGATCTATCAATTGACCCATCACATCTCTTGAAGCCTCT
TCTAAAGTTGGGGTGGTGCCAGTGGATTGGTGCTGTTATTTTCATCTGGGGCTCACTCCA
TCAGATCCGCTGCCATGCAATTCTTGGATCATTGCGTGAACACAAAGATTCTGATGAATA
TGTAATTCCGTGCGGTGACTGGTTTAGTCTAGTGTCTTGCCCTCATTACCTTGCTGAACT
AGTGAGTTCCTACTCTCTTCCAGTCATAACTAATATCCAGGATGTTGCACATACTGATGA
ATATGGAAGATCCCACTAAAGTACTATAAATAATGGTGTCAAGTGAAAATAGGCTACCAA
CAAAAATACAAAATAAAATTTCTATTTTCTGTAATTTTAGGGTCTGGGAGCCTGGGATAT
TGGAATGGATTCCTTATTTGTGGATGAGGGTGCTAGCAAATAGGGAATTTTAATGCTTCC
CTTATACCGGATTTATTTTAATGTTTACACTGAAACTCTATGTGATGTAATGAGACTTCT
CATCAAATGTGCCATGTCCCCCATCTTGTCAACTTTTTTTCTCGAAAACATAGGATAAAT
GCATTTTTTGTATTATAAGAAGGAAAATAGGGACGAGAACCCTTGCACAAACACACCAAA
ACAATTTCAGTTCACTTCACAAGGTTACACAGATCGTCGATGATAAAAGACAATGGCCTG
ACCTAGCCTAAGCCTACTACTATTCCCTATCCAGTGCCCCAGCAAAATTGCTCCTCTTAA
GCAAAATTACTTCACAAGAGGAATAGCAGCTCCTCTTTAGCGGGCAATATTAAAAAGAAG
AGACAAAAACAGTACTGGCGGGACAAATTTTACCGCTGCATTTGCACAAAGGCTGCGTCG
AACTCAGGACCTTTTGGCTTAGTGGGAAGGCTTATCACCACTGCGCCAGGTTTGTCCTTC
TTTAGCAAGCAATATTGCTCCAGCTAAATTTTCAGATGTCCCAGCAAAGACACGTGTTAT
GGAGTTTCCGAATTGTCTAAGGCCTCCAGAATTATAATAGAGTTGAGCCCCTTATGCGTC
TGATTTTCCATTTTGCCAATCTAGTTCCCTCTGCATTATATATCTCCGGAGGAGAATGTA
CATATTCTGTATATGGCTTATTGGCTTAAGGATGATAAAAATATAGGGTTATCTTAGGAA
CACGATTTGTTTCACCATTAGAAAATACCTTGATGATATAGATATCGAACATTTTGCTGT
TCTGTCTAACTCATATAGGGCACTGAGGTCTTGGGTTCCAAATCAGTACATTATTAACAT
TTGCTTTGTTTTGGTATATAGGTAATATATTTTGGCATGTTGGTGGCTAGTGGTGGATCA
GACATTCCGGTGTGGTTCCTGTACCTTTTTGTGATAACAAATTTGTCCTTTGCAGCGGTA
CAAACACATAAATGGTATCTTCAGAAATTTGAAGATTACCCTCGTTCTCGCTACGCAATC
GTTCCATTTGTATGCTAGATGTCCCCATAAATGCCAACAGCATTTGTTGTCTGTTTTCAT
CTGCTTGCACCAGTCAGGCATGCAACAGATATTGATGTAAATGTGACTATGCAATGTTGA
ACTTAAGTAGTTCCGATCATTCTGAATGTGCTTAGAAGGTTATAAGGTTATGTTTGTGTA
TGTAGATTATAACACACAGATATTTGATGTAAAGTAGTATTAATTAATACTTTTTAGCAT
TAATGAAAATGAAGTCCTTCAGAAC