Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025998_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:10:135688446:135692128:1 gene:Zm00001d025998 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase 3
Sequence

ATGGTGAAGCGATGGCTTCCCCTCGAGGCCAACCCCGACGTCATGAACCAGTTCATGTGG
GGACTGGGGGTCCCCGAGGACGTGGGGTTCTGCGACGTGTACGGCCTCGATGACGAGTTG
CTCGCCATGGTGCCCCAGCCGGTGCTCGCGGTCCTACTTCTCTACCCCCAGGACCGGAGC
AAGGAGTCCCAAGCTTCAGCTACCTCGTCGGTGGAGACCAAGGAGCCCAGCAAGAACGTA
TATTTCACAAAGCAAACTGTTGGGAATGCCTGTGGCACAGTTGGTATTATTCATGCACTG
GGGAATGCTACTTCCAGAATCAAGTTAGGTGAGGGGTCATATTTTGATAGATTTTATAAA
CGAACTGCTGACATGGATCCTATCCAGCGTGCTGCATTTCTTGAGGAGGACGAGGAAATG
GAGAATGCTCATTCCATTGCCGCTACTGCTGGTGACACAGAGGCCAAGGACGGTGTAATT
GAACATTACATTTGTTTCTCTTGTGTCGATGGAGAGCTTTATGAGCTTGATGGGGGGACA
TCACAGCCAATACCCCATGGGCCTTCCACTCCTGATACCTTGTTGCAGGATGCTGCAGAA
GTTATAAAAGCAAGAATCGCCATGTATTCACAGTCAAACAACTTCAATGTCATGGCTCTT
TCAGGCAAAGCGATATAG

Peptide Sequence

PEP ID

Zm00001d025998_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:10:135688446:135692128:1 gene:Zm00001d025998 transcript:Zm00001d025998_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase 3
Sequence

MVKRWLPLEANPDVMNQFMWGLGVPEDVGFCDVYGLDDELLAMVPQPVLAVLLLYPQDRS
KESQASATSSVETKEPSKNVYFTKQTVGNACGTVGIIHALGNATSRIKLGEGSYFDRFYK
RTADMDPIQRAAFLEEDEEMENAHSIAATAGDTEAKDGVIEHYICFSCVDGELYELDGGT
SQPIPHGPSTPDTLLQDAAEVIKARIAMYSQSNNFNVMALSGKAI

Transcript Sequence

Transcript ID

Zm00001d025998_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:135688446:135692128:1 gene:Zm00001d025998 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase 3
Sequence

AAAATTTCGACTTTTTTTTTAAAAAAAATACACTATAACCGAGAGCGTCTGAAAAATGGG
AACAAACTAGCAACTGAAGCGTACTAACAAAAAGCGCCCGATTCGCCTCGCAAAATCGCC
GCCGCCATCACCTACCTACTCACAGAAGTTCCGCCTTCCTTTCCTCCGGCGCGCGCCGCG
CCTGTCGCCATGGTGAAGCGATGGCTTCCCCTCGAGGCCAACCCCGACGTCATGAACCAG
TTCATGTGGGGACTGGGGGTCCCCGAGGACGTGGGGTTCTGCGACGTGTACGGCCTCGAT
GACGAGTTGCTCGCCATGGTGCCCCAGCCGGTGCTCGCGGTCCTACTTCTCTACCCCCAG
GACCGGAGCAAGGAGTCCCAAGCTTCAGCTACCTCGTCGGTGGAGACCAAGGAGCCCAGC
AAGAACGTATATTTCACAAAGCAAACTGTTGGGAATGCCTGTGGCACAGTTGGTATTATT
CATGCACTGGGGAATGCTACTTCCAGAATCAAGTTAGGTGAGGGGTCATATTTTGATAGA
TTTTATAAACGAACTGCTGACATGGATCCTATCCAGCGTGCTGCATTTCTTGAGGAGGAC
GAGGAAATGGAGAATGCTCATTCCATTGCCGCTACTGCTGGTGACACAGAGGCCAAGGAC
GGTGTAATTGAACATTACATTTGTTTCTCTTGTGTCGATGGAGAGCTTTATGAGCTTGAT
GGGGGGACATCACAGCCAATACCCCATGGGCCTTCCACTCCTGATACCTTGTTGCAGGAT
GCTGCAGAAGTTATAAAAGCAAGAATCGCCATGTATTCACAGTCAAACAACTTCAATGTC
ATGGCTCTTTCAGGCAAAGCGATATAGCATTATAGCACTTTCAGTCATAGGCACTCGATA
TCCCACATTTGCTTTGCAGCAGCCTTAGTCCAACACTGCAGTATGTTCTATTGTTTTCTT
GCCTTCGTTTTATTATTTAAACACGTTAAAACAAGATAAATAAAAGCGTGGCTACAGAAA
AGTTCCCGTTGGTAGTATCACTTCTCTTAAGAGCTAATGTGCCGTTTCGTTCACACAAAA
TGTAATGTAACGTAAATGGATTCACGCTGGAATACCGGTGGTAAAGTTTAAATAAGCCGG
TATCTATTTCTAGTGTTATATTAATTACTGTTAGGC