Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025984_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:10:135303016:135307138:1 gene:Zm00001d025984 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glutamic dehydrogenase2 description: glutamic dehydrogenase2
Sequence

ATGAACGCGCTCGCCGCCACCACCCGCAACTTCCGGCGGGCATCGAAGCTGCTCGGCCTC
GACTCCAAGCTCGAGCAGAGCCTGCTCATCCCGTTCCGGGAGATCAAGGTGGAATGCACC
ATCCCCAAAGACGACGGCAGCTTGGCGACGTTCGTGGGGTTCCGCGTGCAGCATGATAAC
GCCCGCGGGCCGATGAAAGGCGGCATCCGCTATCACAATGAGGTTGATCCAGATGAAGTA
AATGCCCTTGCTCAACTCATGACATGGAAGACAGCTGTTGCTGCAGTCCCATATGGTGGA
GCAAAGGGAGGGATCGGGTGCTCTCCTGGTGAACTAAGTAGAAGTGAGTTGGAGCGGTTG
ACACGAGTATTTACCCAGAAAATTCATGATCTTATCGGAACGCATACAGATGTCCCTGCT
CCTGACATGGGGACCAATGCACAAACCATGGCATGGATGCTGGATGAGTACTCGAAATTT
CATGGTCACTCCCCAGCAGTCGTCACTGGGAAGCCAATAGATCTTGGCGGATCACTGGGC
AGGGATGCAGCAACAGGGCGAGGCGTAATGTATGCTACCGAGGCCCTACTCGCTGAATAT
GGAAAATGCATTTCTGGATCAACTTTTGTGATCCAAGGTTTTGGCAATGTTGGTTCATGG
GCTGCTCGACTTATTCACGAGAAAGGTGGTAAGATTATTGCAATTGGGGATGTGACAGGT
TCAATTAGAAACACGGCTGGTATAGACATACCTGCTTTGGTGAAGCATAGGAATGAAGGT
CATGCGATGAAAGACTTCGATGGTGCGGAAGTTTTGGATTCAACCGAGTTGTTAGTGCAT
GACTGTGATGTTCTTGTCCCCTGCGCCTTAGGTGGAGTTCTTAACAAGGATAATGCACCA
GACGTGAAGGCCAAATTTGTAATCGAAGCTGCTAACCATCCAACTGATCCAGAGGCAGAC
GAGATTCTCGCCAAGAAGGGGGTAGTAGTATTACCTGATATATATGCTAATTCAGGTGGC
GTGGTCGTTAGCTACTTTGAATGGGTGCAGAACATTCAAGGTTTCATGTGGGATGAGGAG
AAAGTTAACGATGAACTAGAAAAGTACATGAGCAGTGCTTTTCAACACATGAAAGCCATG
TGCAAATCTCTGGATTGCGACCTTAGGATGGGGGCCTTCACCTTAGGAGTTAACAGGGTT
GCTCGTGCCACCCTTTTGAGAGGCTGGGAGGCATGA

Peptide Sequence

PEP ID

Zm00001d025984_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:10:135303016:135307138:1 gene:Zm00001d025984 transcript:Zm00001d025984_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glutamic dehydrogenase2 description: glutamic dehydrogenase2
Sequence

MNALAATTRNFRRASKLLGLDSKLEQSLLIPFREIKVECTIPKDDGSLATFVGFRVQHDN
ARGPMKGGIRYHNEVDPDEVNALAQLMTWKTAVAAVPYGGAKGGIGCSPGELSRSELERL
TRVFTQKIHDLIGTHTDVPAPDMGTNAQTMAWMLDEYSKFHGHSPAVVTGKPIDLGGSLG
RDAATGRGVMYATEALLAEYGKCISGSTFVIQGFGNVGSWAARLIHEKGGKIIAIGDVTG
SIRNTAGIDIPALVKHRNEGHAMKDFDGAEVLDSTELLVHDCDVLVPCALGGVLNKDNAP
DVKAKFVIEAANHPTDPEADEILAKKGVVVLPDIYANSGGVVVSYFEWVQNIQGFMWDEE
KVNDELEKYMSSAFQHMKAMCKSLDCDLRMGAFTLGVNRVARATLLRGWEA

Transcript Sequence

Transcript ID

Zm00001d025984_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:135303016:135307138:1 gene:Zm00001d025984 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glutamic dehydrogenase2 description: glutamic dehydrogenase2
Sequence

TTGAATTCGATCTCCCTTCCCTATCCGGCATCAGCGCGCACCACCACTAGCGAATCCCGT
TTGGTCATCAAGAAGACGTACGGCTGTCTCCAATCGAAGTTCCAGTCCCACTCCAACATC
GGAGAGAGAGCACATGTCAGTCTGACTTGCGAACTCCTTCCCTCTCCTCCTTCCCCCAGG
TCAGGAGTCCCAGATCGTGAAGCCAGCTATTTTACTCTACTCCCCCCTCACCACGAGTCG
GAATTCAGCCCCGCGCCGCGCGTCGATCTTATCCTCCAGTCTGATTCCAGCTCCGCCCCC
GCCTCCACCTCCCCTCTCTCTCGATCCCTCGCTATTAATACATCCCGGCGGTTCACTCCC
GATCTCCATCCCTCCCGGCCGGGCCTGCCTCCTCGATCCTCGGACGAAACGCGCCGCCTT
CTTTCTTCGTCCCAGCCTCGCCTCCTGCCCTTTTTAGGTCGCCCGGATCTCGCTCTCGTC
GTCGTCGTCGCGCGCGCGCGCGCGCTTCTTGTTTCTGTCGGCGCCGCCGCGGTGCTGGGA
AGGCGGCTCCTTTTCGCGGCCACAACCCACAACACGTCCTCGTGATCCTAGTACCTTCTT
CTTGGAAAAAGTTGCCGCCGCGATGAACGCGCTCGCCGCCACCACCCGCAACTTCCGGCG
GGCATCGAAGCTGCTCGGCCTCGACTCCAAGCTCGAGCAGAGCCTGCTCATCCCGTTCCG
GGAGATCAAGGTGGAATGCACCATCCCCAAAGACGACGGCAGCTTGGCGACGTTCGTGGG
GTTCCGCGTGCAGCATGATAACGCCCGCGGGCCGATGAAAGGCGGCATCCGCTATCACAA
TGAGGTTGATCCAGATGAAGTAAATGCCCTTGCTCAACTCATGACATGGAAGACAGCTGT
TGCTGCAGTCCCATATGGTGGAGCAAAGGGAGGGATCGGGTGCTCTCCTGGTGAACTAAG
TAGAAGTGAGTTGGAGCGGTTGACACGAGTATTTACCCAGAAAATTCATGATCTTATCGG
AACGCATACAGATGTCCCTGCTCCTGACATGGGGACCAATGCACAAACCATGGCATGGAT
GCTGGATGAGTACTCGAAATTTCATGGTCACTCCCCAGCAGTCGTCACTGGGAAGCCAAT
AGATCTTGGCGGATCACTGGGCAGGGATGCAGCAACAGGGCGAGGCGTAATGTATGCTAC
CGAGGCCCTACTCGCTGAATATGGAAAATGCATTTCTGGATCAACTTTTGTGATCCAAGG
TTTTGGCAATGTTGGTTCATGGGCTGCTCGACTTATTCACGAGAAAGGTGGTAAGATTAT
TGCAATTGGGGATGTGACAGGTTCAATTAGAAACACGGCTGGTATAGACATACCTGCTTT
GGTGAAGCATAGGAATGAAGGTCATGCGATGAAAGACTTCGATGGTGCGGAAGTTTTGGA
TTCAACCGAGTTGTTAGTGCATGACTGTGATGTTCTTGTCCCCTGCGCCTTAGGTGGAGT
TCTTAACAAGGATAATGCACCAGACGTGAAGGCCAAATTTGTAATCGAAGCTGCTAACCA
TCCAACTGATCCAGAGGCAGACGAGATTCTCGCCAAGAAGGGGGTAGTAGTATTACCTGA
TATATATGCTAATTCAGGTGGCGTGGTCGTTAGCTACTTTGAATGGGTGCAGAACATTCA
AGGTTTCATGTGGGATGAGGAGAAAGTTAACGATGAACTAGAAAAGTACATGAGCAGTGC
TTTTCAACACATGAAAGCCATGTGCAAATCTCTGGATTGCGACCTTAGGATGGGGGCCTT
CACCTTAGGAGTTAACAGGGTTGCTCGTGCCACCCTTTTGAGAGGCTGGGAGGCATGAGA
CCATTGACCGCGCATTACAGATTCGACAGGCGCATTCAATAATTCGTGTCCAACAACGTT
GGAGGATCAGTGTATACGGTAAAATTCATCCGGCTTGGAATGAGCCCGTTGAAGGGTGTT
GTGCTTGTTGATCCTGAGTTACCAATGGTTGGTTCACCAGTTTTTGGTGATGATTAGTGA
AAATTTTATTCAAAACCATTTTATTGTATTTTAGAAAGCTAATTTGGCCTCGACAGAGTT
ACTGTACCTTTTCATTTTTAATGAAATTCTGGTCTGAGGTTTGAAGTTCCCAGATGTAAA
TGATTTGCAAAAAAATTGCAGAAGGGATTCAAATAAACCAGTTATCATTC