Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025958_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:10:134775133:134779422:-1 gene:Zm00001d025958 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldehyde dehydrogenase

Sequence

ATGGGCCGCACCGAGGCGGCGGACGACGGCGCCGAGTCCGGCGGGCTGGGCCTGGGGGTG
GGGGTGGGGGTGGGGGAGACAGTGCGCGAGCTGCGGGAGGCGTACGAGAGCGGCAGGACG
CGGAGCCTAGCGTGGCGGCAGGCGCAGCTGCGGGGCCTCCTCCGGCTCCTCGAGGAGAAG
GAGGTGGAGGCGTTCCAGGCGCTCCACAAGGACCTCGGCAAGCACCACGCCGAGGCGTAC
AGGGACGAGGTGCGGGTCCCGCTGATCGCTTGGCCGGCGACCGCGCAGGTGGTGCCGGAG
CCGCTCGGGGTCGTCCTCGTCTTCTCCTGCTGGAACGTCCCCTTGGGCCTGTCGCTGGAG
CCGCTGATCGGGGCGATAGCGGCCGGGAACGCGGTGGCTCTGAAGCCGTCCGAGCTCTCG
CCGTGCACCGCCAGGTTCCTGGGCGACAACATCGGGAGGTACATGGACTCCTCGGCGGTG
AAGGTCGTCCAGGGCGGCCCCGACGTCGGAGTGCAGCTCATGGAGCACCGCTGGGACAAG
GTCCTCTTCACCGGGAGCCCCCGCATCGCGCGCGCCGTGATGGCCGCGGCGTCCAGGCAC
CTGACGCCCGTCGCGCTGGAGCTGGGCGGCAAGTGCCCCTGCATCTTCGACGCCATGGGC
AGCGCCCGGGACCTGCAGATCTCGGTTAACCGCATGATCGCGGGCAAGTGGTCGTCCTGC
GCCGGACAGGCCTGCATCGCCATCGACTACGTGCTCGTCGAGGAGCGCTTCGCGCCCATC
CTGATCAAGGTGCTCAAGTCGACGCTGAAGAGGTTCTTCCCGGAAGCGGACCACATGGCA
CGGATCGTGAACGAGCGCCACTTCGAGAGGCTGAGTAACCTTCTCAAAGACAGGTCCGTG
GCGCCGTCCGTCCTGCACGGCGGCTCCATGGACAGCAAGAACTTGTACATTGAGCCCACG
ATACTGCTGAACCCGCCGCTGGACTCCGCGATCATGACCGAGGAGATATTCGGGCCCCTG
CTCCCGATCATCACGGTCAAGAACATCGAGGACAGCATCGCCTTCGTGAAGGCCATGCCG
AAGCCTCTCGCCATCTACGCGTTCACCCGGGACGCCGCCCTGCGGCGGCGAATCGTGGAC
GAGACGTCGTCCGGGAGCGTCACCTTCAACGACGCGGTAGTGCAGTACGCGATAGACGGG
CTCCCGTTCGGCGGCGTCGGCCAGAGCGGGTTCGGGCAGTACCATGGGAAGTACTCGTTC
GAGATGTTCAGCCACAAGAAGGCGGTCATGAAGCGGGGCTACCTCGTGGAGCTGACACTC
AGGTACCCGCCGTGGGACGAGAGCAAAGTCACCCTCATGCGCTACCTCTACCGCTTCAAC
TACTTCGCCTTCGTCCTCTCTTTCCTCGGGCTCAGGCGATGA

Peptide Sequence

PEP ID

Zm00001d025958_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:10:134775133:134779422:-1 gene:Zm00001d025958 transcript:Zm00001d025958_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldehyde dehydrogenase

Sequence

MGRTEAADDGAESGGLGLGVGVGVGETVRELREAYESGRTRSLAWRQAQLRGLLRLLEEK
EVEAFQALHKDLGKHHAEAYRDEVRVPLIAWPATAQVVPEPLGVVLVFSCWNVPLGLSLE
PLIGAIAAGNAVALKPSELSPCTARFLGDNIGRYMDSSAVKVVQGGPDVGVQLMEHRWDK
VLFTGSPRIARAVMAAASRHLTPVALELGGKCPCIFDAMGSARDLQISVNRMIAGKWSSC
AGQACIAIDYVLVEERFAPILIKVLKSTLKRFFPEADHMARIVNERHFERLSNLLKDRSV
APSVLHGGSMDSKNLYIEPTILLNPPLDSAIMTEEIFGPLLPIITVKNIEDSIAFVKAMP
KPLAIYAFTRDAALRRRIVDETSSGSVTFNDAVVQYAIDGLPFGGVGQSGFGQYHGKYSF
EMFSHKKAVMKRGYLVELTLRYPPWDESKVTLMRYLYRFNYFAFVLSFLGLRR

Transcript Sequence

Transcript ID

Zm00001d025958_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:134775133:134779422:-1 gene:Zm00001d025958 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldehyde dehydrogenase

Sequence

CTCTCAGGCAGCCTCTCGCTGTGTCAGTTCTTCCGCTTTGTAATTGTAGAAGGAGAGTGA
GCTCATCATCAAGTCGAGACGATGGGCCGCACCGAGGCGGCGGACGACGGCGCCGAGTCC
GGCGGGCTGGGCCTGGGGGTGGGGGTGGGGGTGGGGGAGACAGTGCGCGAGCTGCGGGAG
GCGTACGAGAGCGGCAGGACGCGGAGCCTAGCGTGGCGGCAGGCGCAGCTGCGGGGCCTC
CTCCGGCTCCTCGAGGAGAAGGAGGTGGAGGCGTTCCAGGCGCTCCACAAGGACCTCGGC
AAGCACCACGCCGAGGCGTACAGGGACGAGGTGCGGGTCCCGCTGATCGCTTGGCCGGCG
ACCGCGCAGGTGGTGCCGGAGCCGCTCGGGGTCGTCCTCGTCTTCTCCTGCTGGAACGTC
CCCTTGGGCCTGTCGCTGGAGCCGCTGATCGGGGCGATAGCGGCCGGGAACGCGGTGGCT
CTGAAGCCGTCCGAGCTCTCGCCGTGCACCGCCAGGTTCCTGGGCGACAACATCGGGAGG
TACATGGACTCCTCGGCGGTGAAGGTCGTCCAGGGCGGCCCCGACGTCGGAGTGCAGCTC
ATGGAGCACCGCTGGGACAAGGTCCTCTTCACCGGGAGCCCCCGCATCGCGCGCGCCGTG
ATGGCCGCGGCGTCCAGGCACCTGACGCCCGTCGCGCTGGAGCTGGGCGGCAAGTGCCCC
TGCATCTTCGACGCCATGGGCAGCGCCCGGGACCTGCAGATCTCGGTTAACCGCATGATC
GCGGGCAAGTGGTCGTCCTGCGCCGGACAGGCCTGCATCGCCATCGACTACGTGCTCGTC
GAGGAGCGCTTCGCGCCCATCCTGATCAAGGTGCTCAAGTCGACGCTGAAGAGGTTCTTC
CCGGAAGCGGACCACATGGCACGGATCGTGAACGAGCGCCACTTCGAGAGGCTGAGTAAC
CTTCTCAAAGACAGGTCCGTGGCGCCGTCCGTCCTGCACGGCGGCTCCATGGACAGCAAG
AACTTGTACATTGAGCCCACGATACTGCTGAACCCGCCGCTGGACTCCGCGATCATGACC
GAGGAGATATTCGGGCCCCTGCTCCCGATCATCACGGTCAAGAACATCGAGGACAGCATC
GCCTTCGTGAAGGCCATGCCGAAGCCTCTCGCCATCTACGCGTTCACCCGGGACGCCGCC
CTGCGGCGGCGAATCGTGGACGAGACGTCGTCCGGGAGCGTCACCTTCAACGACGCGGTA
GTGCAGTACGCGATAGACGGGCTCCCGTTCGGCGGCGTCGGCCAGAGCGGGTTCGGGCAG
TACCATGGGAAGTACTCGTTCGAGATGTTCAGCCACAAGAAGGCGGTCATGAAGCGGGGC
TACCTCGTGGAGCTGACACTCAGGTACCCGCCGTGGGACGAGAGCAAAGTCACCCTCATG
CGCTACCTCTACCGCTTCAACTACTTCGCCTTCGTCCTCTCTTTCCTCGGGCTCAGGCGA
TGAACTTCACTCCAGCATCAACGCAAGGATCGCACAGGGATTGGGCCCAATATAGGCGAT
GAACTGGCATTGACAGTGGATGGAGGAACAAGCCAATATAGACAATATGCAGTAGATGTC
TTGTTTGTGAGGAACATGTGTCATGCCGCACTTCAAAACCAGTAATATGCTAACCTGCAT
CCTATCTATGATTGCCTCTAGTGAGACAAACAGTGAAATGCCTTTCAATCTTTAGTAGTA
CATTGGTCGAGACCATCATCTATCCTCTGCATAAAAGTATCAAGTGCAAAGGACC