Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d025950_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:10:134553869:134559580:-1 gene:Zm00001d025950 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy13d description:Autophagy-related protein 13a
Sequence	ATGTCCGGGATGTCCGACTCCGCGGGCGGCGGGCGTGCGGGCGCAGAGCTGATGGTGGAG CAGTTCCACCTCAAGGTGCTCCACGCCGTGCGCACGCCGCGCCCGCTCGCCGCCGCCGCC GCTGCCGCGTCGTCGTCGTCGTCGTTCAGGCGGAGGGACAGGTGGTTCCATCTCCCGCTC CACGACCCGCCGCCGCCCGAGGCGGCCGGTCGCCTCGACGAGCTGGCCCCCGGGCAGCCG CGTGTGGTGGACGTCCTCCTGTGTCCTGCCACCGCCAGTGGTGTGGGAGACCGAGGGGAG GTGGTGGAGAGGTGGACCGTGGCGTGCGAGCCCTGGCCAGACGCCGCGAGCGGCGAGGAG GTTGCCGTGAACCGGGCGTACAAGCACTGCTTCACGCTGCTCAGGTCCGTTTACGCCGCG CTCCGCGTCCTCCCGGCCTACCGCGTCTTCCGCCTCCTCTGCGCCAACGCCTCCTACAAC TATGAGATGGGACACCACGTTGACACCTTCGCCGAGCCCTTCTCGCGCCCTCAGGAGGCC GCCATGCGTTCCCAACGCTTCGTTCCCGTCGAAACCCAGCTCGGTCGCCTCGTCGTTTCC GTCCACTATCTCCCCAGCCTCGCCGGCGTCGCCGCCTTCAACCTCGAGATCACCCCCCTT TCGCCCTCCATGATAATCCCAGACTACGTCGGCAGCCCAGCCGCTGAGCCCATGCGCACC TTCCCGGCCTCGCTTACAGAAGCCACGGGCTCCGGCTTCCCACCGTCCTATGAGCAGCAG CGTCCACACAGCTGGGCTTCACCTGCGTTCTGGCCGCACACGCCGGCACACCAGGCCAGG TTCTCGCCACCTCCAGTGTTTTATGCGTCACCGACGCCATCGCCTCCCCACTTTCCGCCC GGTCTCATGAGGTGGGAGTCTGCGCCAATGCCCATACCACAGGTGAGCGAGAGGAGGAGC CCCGCACACCTCCAGAATATGCTGCCACCGCCTTCGCCGAGAAGAGCAGACACGGGGGCA GCAGGTGCTCTAGAGTTTCCATCTGAGAGTGGCCGGTTGATTGGGAGGATGGAGGAACTT CGGCTAGCTGATCTACATGCGACCTCGTCACCCAGACACAAGGGCAAGGACAATAAAGAT GAATCTGGCAGATTCTCTGCACTCTCCTCATGTGATTCACCACGGCAAGATGATCTGGAT GATGTGGATTACCATTTTGATGTTGATGATGTTGATACCCCAGTCTCTCAACCTCGGAGC ACTAGCGGGAAGGAAACAGGTGATCAGGTTGGTTCATTGCCCCACAAATCTCAAGACGCA CAGGTCGGTTATCTAGTCAACCTGCTGAGAAACGCCCGCCCGCTGCGAAATCCTAGCAAT CCATCACAAACACCAAGGGCTCAGTCCACCAGAGTAACCTCAGCAAGCTCGGTCACCACA TCTGACGCGCTGGAGGTGCTCCAGTCCTTCAAAGAGACAAGGGAGCGACTGCTGTCCCGG AGCAGCGCAAAACATCAAGAGCCACCGGGAAAGCCATAG

Peptide Sequence

PEP ID	Zm00001d025950_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:10:134553869:134559580:-1 gene:Zm00001d025950 transcript:Zm00001d025950_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy13d description:Autophagy-related protein 13a
Sequence	MSGMSDSAGGGRAGAELMVEQFHLKVLHAVRTPRPLAAAAAAASSSSSFRRRDRWFHLPL HDPPPPEAAGRLDELAPGQPRVVDVLLCPATASGVGDRGEVVERWTVACEPWPDAASGEE VAVNRAYKHCFTLLRSVYAALRVLPAYRVFRLLCANASYNYEMGHHVDTFAEPFSRPQEA AMRSQRFVPVETQLGRLVVSVHYLPSLAGVAAFNLEITPLSPSMIIPDYVGSPAAEPMRT FPASLTEATGSGFPPSYEQQRPHSWASPAFWPHTPAHQARFSPPPVFYASPTPSPPHFPP GLMRWESAPMPIPQVSERRSPAHLQNMLPPPSPRRADTGAAGALEFPSESGRLIGRMEEL RLADLHATSSPRHKGKDNKDESGRFSALSSCDSPRQDDLDDVDYHFDVDDVDTPVSQPRS TSGKETGDQVGSLPHKSQDAQVGYLVNLLRNARPLRNPSNPSQTPRAQSTRVTSASSVTT SDALEVLQSFKETRERLLSRSSAKHQEPPGKP

Transcript Sequence

Transcript ID	Zm00001d025950_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:134553869:134559580:-1 gene:Zm00001d025950 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy13d description:Autophagy-related protein 13a
Sequence	ATCCATCATGAGGACACTAACAGCGACGTATTAACCCAAACCCAGAGAGCACAGCTACCG ATCCTTAATCCTCCTGCAGATAAACACCCTATCAACGCAAATCCCCAGCTCTTCCAACCT CTCCTCTCCCTCCCCATCAGCGCACAGATCTATCGATCACTACGGTTCCATCTCGCACCC AACTAGGCCTCCGATTATTCCGATCGCCAGCGGATCAGATTTATGCAGTCTTACTGCCGC CAGCTCCAGCCATGCCGCGGGGCAGCAGCTTGGACCAGAGCCTGAGCGACGAGGAGCGGT CGGCAGGTACTGGGGCGGTTTGGGTCCGGCGTCGCCGGCAATGTCCGGGATGTCCGACTC CGCGGGCGGCGGGCGTGCGGGCGCAGAGCTGATGGTGGAGCAGTTCCACCTCAAGGTGCT CCACGCCGTGCGCACGCCGCGCCCGCTCGCCGCCGCCGCCGCTGCCGCGTCGTCGTCGTC GTCGTTCAGGCGGAGGGACAGGTGGTTCCATCTCCCGCTCCACGACCCGCCGCCGCCCGA GGCGGCCGGTCGCCTCGACGAGCTGGCCCCCGGGCAGCCGCGTGTGGTGGACGTCCTCCT GTGTCCTGCCACCGCCAGTGGTGTGGGAGACCGAGGGGAGGTGGTGGAGAGGTGGACCGT GGCGTGCGAGCCCTGGCCAGACGCCGCGAGCGGCGAGGAGGTTGCCGTGAACCGGGCGTA CAAGCACTGCTTCACGCTGCTCAGGTCCGTTTACGCCGCGCTCCGCGTCCTCCCGGCCTA CCGCGTCTTCCGCCTCCTCTGCGCCAACGCCTCCTACAACTATGAGATGGGACACCACGT TGACACCTTCGCCGAGCCCTTCTCGCGCCCTCAGGAGGCCGCCATGCGTTCCCAACGCTT CGTTCCCGTCGAAACCCAGCTCGGTCGCCTCGTCGTTTCCGTCCACTATCTCCCCAGCCT CGCCGGCGTCGCCGCCTTCAACCTCGAGATCACCCCCCTTTCGCCCTCCATGATAATCCC AGACTACGTCGGCAGCCCAGCCGCTGAGCCCATGCGCACCTTCCCGGCCTCGCTTACAGA AGCCACGGGCTCCGGCTTCCCACCGTCCTATGAGCAGCAGCGTCCACACAGCTGGGCTTC ACCTGCGTTCTGGCCGCACACGCCGGCACACCAGGCCAGGTTCTCGCCACCTCCAGTGTT TTATGCGTCACCGACGCCATCGCCTCCCCACTTTCCGCCCGGTCTCATGAGGTGGGAGTC TGCGCCAATGCCCATACCACAGGTGAGCGAGAGGAGGAGCCCCGCACACCTCCAGAATAT GCTGCCACCGCCTTCGCCGAGAAGAGCAGACACGGGGGCAGCAGGTGCTCTAGAGTTTCC ATCTGAGAGTGGCCGGTTGATTGGGAGGATGGAGGAACTTCGGCTAGCTGATCTACATGC GACCTCGTCACCCAGACACAAGGGCAAGGACAATAAAGATGAATCTGGCAGATTCTCTGC ACTCTCCTCATGTGATTCACCACGGCAAGATGATCTGGATGATGTGGATTACCATTTTGA TGTTGATGATGTTGATACCCCAGTCTCTCAACCTCGGAGCACTAGCGGGAAGGAAACAGG TGATCAGGTTGGTTCATTGCCCCACAAATCTCAAGACGCACAGGTCGGTTATCTAGTCAA CCTGCTGAGAAACGCCCGCCCGCTGCGAAATCCTAGCAATCCATCACAAACACCAAGGGC TCAGTCCACCAGAGTAACCTCAGCAAGCTCGGTCACCACATCTGACGCGCTGGAGGTGCT CCAGTCCTTCAAAGAGACAAGGGAGCGACTGCTGTCCCGGAGCAGCGCAAAACATCAAGA GCCACCGGGAAAGCCATAGGCCCATTCTTTGCTTTGTTTCTCTTAACGTGATCGCTGGTA GACCCCCAACCAACCGCGAAACGGGATGCACAATGAGCTAAGCGGACTATAGCTGCTGTG TTCATGTACATATGACTGCCGAAGTTGATGCCTTTGGTTGGAGAGAAGGCACCGGTTTCC ATTTATTCCAGCGGAAGGATCACTCGTCGTTCTTAAGAGTGATGCCGCTGTTGATACCCC CTTTTTTTGTATATGGGAAGTGAAACCGATACACGTAGGTGGGAGCGAGGGAGCCTGTGA ACTGTGATAGATGAAAGCAGGGCGTGTGTGTGTGCTGTGTGTGTAAATTATGTAACTGCT GGGAATCAAATGTTTCATTGGACATCAAGCTTTGATCTGGGAAGTTGTGGATTGGCGAAC TGCAGGCTGTAGTTGGAAAAGGAACTCTCGGTTGAATTGAGAGTTCCAAATTATAATTGA AACATAGTATAT