Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025939_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:10:134161167:134163878:-1 gene:Zm00001d025939 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vesicle-associated protein 1-1
Sequence

ATGCAGTTGACAAACCGAACAGATGACTACATCGGCTTTAAGGTTAAGACGACGAGCCCG
AAGAAGTACTGTGTCCGGCCCAACAGCGGCATCGTGCCACCTCGGTCCACCAGCGATGTC
ATTGTGACAATGCAAGCACAAAAGGAGGCGCCACCGGACATGCAGTGCAAGGACAAGTTT
CTTGTGCAAAGTGTCGTTGTGGCGGAAGGGACCTTAGTCAAGGACATCACTGGCGATATG
TTTACCAAAGAATCAGCTAATGTGGTGGATGAGGTTAAGCTGAAGGTCGTCTACATCCCA
CCACCCAAACCGCCATCCCCAGTGCATGAGGAATCTGAAGAAGGCTCATCACCCCGACCT
TCATTGTCCGATGGAATTAACTTGAATTATCAAGAGACAACGAGGGAATCTGATGAGTCA
CTGTTGTTCTCGGCTGTAAAAACTCATATAGATCAAAAGGACTACACCTCCGAGACATCT
GCTTTGATTTCAAAGTTGACAGAAGAGAGAAACTCTGCCATTCAGCAGAACAATAAGCTT
CGAGAGGAACTGGACCTTACGAGGAGGGAAGCCAACAAGCAGAATGGTGGATTCTCCTTT
GTGGTCGTGGTGGCCATTGCTCTCCTGGGAATGCTACTGGGATATATCATGAAGAGATAG

Peptide Sequence

PEP ID

Zm00001d025939_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:10:134161167:134163878:-1 gene:Zm00001d025939 transcript:Zm00001d025939_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vesicle-associated protein 1-1
Sequence

MQLTNRTDDYIGFKVKTTSPKKYCVRPNSGIVPPRSTSDVIVTMQAQKEAPPDMQCKDKF
LVQSVVVAEGTLVKDITGDMFTKESANVVDEVKLKVVYIPPPKPPSPVHEESEEGSSPRP
SLSDGINLNYQETTRESDESLLFSAVKTHIDQKDYTSETSALISKLTEERNSAIQQNNKL
REELDLTRREANKQNGGFSFVVVVAIALLGMLLGYIMKR

Transcript Sequence

Transcript ID

Zm00001d025939_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:134161167:134163878:-1 gene:Zm00001d025939 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vesicle-associated protein 1-1
Sequence

GCAGTCGAGACAAAGAAGCAGATCTCGTGCTCTATGCAGTTGACAAACCGAACAGATGAC
TACATCGGCTTTAAGGTTAAGACGACGAGCCCGAAGAAGTACTGTGTCCGGCCCAACAGC
GGCATCGTGCCACCTCGGTCCACCAGCGATGTCATTGTGACAATGCAAGCACAAAAGGAG
GCGCCACCGGACATGCAGTGCAAGGACAAGTTTCTTGTGCAAAGTGTCGTTGTGGCGGAA
GGGACCTTAGTCAAGGACATCACTGGCGATATGTTTACCAAAGAATCAGCTAATGTGGTG
GATGAGGTTAAGCTGAAGGTCGTCTACATCCCACCACCCAAACCGCCATCCCCAGTGCAT
GAGGAATCTGAAGAAGGCTCATCACCCCGACCTTCATTGTCCGATGGAATTAACTTGAAT
TATCAAGAGACAACGAGGGAATCTGATGAGTCACTGTTGTTCTCGGCTGTAAAAACTCAT
ATAGATCAAAAGGACTACACCTCCGAGACATCTGCTTTGATTTCAAAGTTGACAGAAGAG
AGAAACTCTGCCATTCAGCAGAACAATAAGCTTCGAGAGGAACTGGACCTTACGAGGAGG
GAAGCCAACAAGCAGAATGGTGGATTCTCCTTTGTGGTCGTGGTGGCCATTGCTCTCCTG
GGAATGCTACTGGGATATATCATGAAGAGATAGATGGGCTCATAATGACTCGGCCTCATG
TTAGACCGTTTTCCTCACAGTATTGAATATTGTCTAATGCACTTATCACATGCACACTGC
TACTCCAT