Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d025919_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:10:133759663:133766278:1 gene:Zm00001d025919 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldolase-type TIM barrel family protein
Sequence

ATGGAGTACCGCGACAAGCTCGTGCTGGCGCCCATGGTCCGCGTGGGCACCTTGCCATTT
AGGCTACTGGCTGCTGAATATGGTGCTGATATTACTTATGGAGAAGAAATTATTGATCAC
AAATTCTTGAAGTGTGAGCGTGTTACAAATGAATCTCTTGGGACTACTGATTTTGTGGAG
AAAGGGACTGACAGTGTAGTTTTCCGTACATGCCCACAAGAAAGGGGCAGGGTTGTATTC
CAAATGGGCACATCAAATGCTGTGAGGGCACTTAAAGCTGCTCAGATCGTGTGCCGTGAT
GTTTCTGCTATAGATATCAACATGGGTTGTCCAAAGTCTTTTTCACTTAGTGGAGGGATG
GGTGCTGCATTACTCTCCAAACCTGAGCTTATACACGATATTCTGACAACACTGCGGAGG
AACTTGGACACAACTGTGACATGTAAAATCCGTCTTCTGAACACACCTAAAGACACTGTG
GAGTTGGCACGCCGGATTGAGAAAACTGGTGTTCCTGCTCTTGCTGTCCATGGAAGAAAG
ATTAAAGATAGACCGAGAGATCTTGCCAAGTGGGATGAGATAGCTGATGTTGTGTCAGCG
CTGTCAATTCCAGTTATAGCTAATGGAGATGTCTTTGAGTATGAGGATTTTAAGAGAATT
AAAGATGCAACAGGTGCCGCGTCTGTTATGGTTGCTAGAGGTGCTATGTGGAATGCCTCC
ATCTTTTGTGCCAAAGGAAAAACACCTTGGGAGGATGTCAAAAGAGAGTATGTAAGAAAG
AGCATATTGTGGGACAACGATGTGAAGAGCACGAAACATACCTTGAAAGAAATGATAATG
CACTATTCTTGCCTTGAACTTCCTGAGGGGAAAGGCGTTATAAAGTGTGATACATCTGAA
GATTTAGCGAGACTATACGGGGAAGAGGACTACTATAATTTTGTTGTTGCAAATAGGAAA
TGA

Peptide Sequence

PEP ID

Zm00001d025919_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:10:133759663:133766278:1 gene:Zm00001d025919 transcript:Zm00001d025919_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldolase-type TIM barrel family protein
Sequence

MEYRDKLVLAPMVRVGTLPFRLLAAEYGADITYGEEIIDHKFLKCERVTNESLGTTDFVE
KGTDSVVFRTCPQERGRVVFQMGTSNAVRALKAAQIVCRDVSAIDINMGCPKSFSLSGGM
GAALLSKPELIHDILTTLRRNLDTTVTCKIRLLNTPKDTVELARRIEKTGVPALAVHGRK
IKDRPRDLAKWDEIADVVSALSIPVIANGDVFEYEDFKRIKDATGAASVMVARGAMWNAS
IFCAKGKTPWEDVKREYVRKSILWDNDVKSTKHTLKEMIMHYSCLELPEGKGVIKCDTSE
DLARLYGEEDYYNFVVANRK

Transcript Sequence

Transcript ID

Zm00001d025919_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:10:133759663:133766278:1 gene:Zm00001d025919 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldolase-type TIM barrel family protein
Sequence

ACAGCAACTTCCACCGCGTACTCCCTCCCTCCCTCGTCTCGTCTTCGTCTCCAGGTTTCG
CGGGGGCCAAGGTTTCTGCCGGAGCAGTCGCGGTCTGCGCTGCGGCACGGCGACGAGGTG
GGGATGGAGTACCGCGACAAGCTCGTGCTGGCGCCCATGGTCCGCGTGGGCACCTTGCCA
TTTAGGCTACTGGCTGCTGAATATGGTGCTGATATTACTTATGGAGAAGAAATTATTGAT
CACAAATTCTTGAAGTGTGAGCGTGTTACAAATGAATCTCTTGGGACTACTGATTTTGTG
GAGAAAGGGACTGACAGTGTAGTTTTCCGTACATGCCCACAAGAAAGGGGCAGGGTTGTA
TTCCAAATGGGCACATCAAATGCTGTGAGGGCACTTAAAGCTGCTCAGATCGTGTGCCGT
GATGTTTCTGCTATAGATATCAACATGGGTTGTCCAAAGTCTTTTTCACTTAGTGGAGGG
ATGGGTGCTGCATTACTCTCCAAACCTGAGCTTATACACGATATTCTGACAACACTGCGG
AGGAACTTGGACACAACTGTGACATGTAAAATCCGTCTTCTGAACACACCTAAAGACACT
GTGGAGTTGGCACGCCGGATTGAGAAAACTGGTGTTCCTGCTCTTGCTGTCCATGGAAGA
AAGATTAAAGATAGACCGAGAGATCTTGCCAAGTGGGATGAGATAGCTGATGTTGTGTCA
GCGCTGTCAATTCCAGTTATAGCTAATGGAGATGTCTTTGAGTATGAGGATTTTAAGAGA
ATTAAAGATGCAACAGGTGCCGCGTCTGTTATGGTTGCTAGAGGTGCTATGTGGAATGCC
TCCATCTTTTGTGCCAAAGGAAAAACACCTTGGGAGGATGTCAAAAGAGAGTATGTAAGA
AAGAGCATATTGTGGGACAACGATGTGAAGAGCACGAAACATACCTTGAAAGAAATGATA
ATGCACTATTCTTGCCTTGAACTTCCTGAGGGGAAAGGCGTTATAAAGTGTGATACATCT
GAAGATTTAGCGAGACTATACGGGGAAGAGGACTACTATAATTTTGTTGTTGCAAATAGG
AAATGAATACAATTTGATGTTGTGAGCTCTCATGTGTACCAGCAAAACCGGTGAAACTTG
CCTGGAACTTGAAGAAAGATGTTCACTTGCATGATTAAATTGCAAATCAGAGGTACCCAT
GGCCACAATGTAATTTCGAAAGGTTTTTTCATCATAATAAAAAATTGCAATAATTCAGTG
ATCAATGGGTAATGGAGCAGAACTCTCAACTTCATGATTGATTATTCGCTTCGATTAAAG
CCAGCTGTTTGGACTGCTGTAGCTGCAATCCATAGAGATAAAACACTGTAGAAGCAATAG
AAGCCTACGGATTAAAGTCAAGCAAACAGGCTAGACCTCTCTCTTTCTCTGAAAAATGTA
CTACCAAGAACCTGCATATCTACATACAATGACACCTCTCCTCACCTGCCCGTGACGCTG
AGCTGCCTTCGCCCCCCCCCCCCTCCCCCTTCGCCGCCGCTGCCTAGATGTTTCATTTCA
TCTTTGTGCGTGTGAGGCACACGGCACGATAAGGACGAATGTTGGGTGGGGCTGCTCCCT
CTTTCAATGGAATGACATGGTCAATATCACGTTGAGGAGGGACTTTTGTGTACTCCTGAC
AGAATTCAGAGTATTGTTGCAGTAAGGCTTGAATAGCCAGACGAAGAGTGTGGTGCCTGC
AGAGATAAGCTGTTGAGATGCAGAATGAAACCAGAAATGCCTTTGTTGAGAAGCTTGTTC
ATTATCCTTTTCAGTTGTTCAGTGTACGCGTCCTGAGATGTGCAATCCTTTAATGAGAGG
AGAGTATCATCTTCTAAGGAGTCAAGGGTGTTGTTCAAGGCATGTTCCTGAATAGAGAAT
GCAGTGCCTGTTATGATTGCCCCAGATCTTCTGCTTGGATTCCTATCTCACCCTTTATTG
ATGGGATTAGGAGGAATTCCTGCCACCAAGGACAACGGGATTTGCCATTTTGGCGCTGTC
TGGACTTAACACTGAAGCTGCTGATCTTTCTCTTGTACTGGTAATAGTTAGGTTTATACC
TGAAATTAATCAAACACCATTTTTTTGTAACAAATACTAATTTATTTGCTTTCTATACTA
TGGAAATTTTG