Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d025870_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:132102174:132108037:-1 gene:Zm00001d025870 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat family protein
Sequence	ATGCAGAATCCAAGCGGCACCATCCTTCAGTTCTACCACTCGGGACGGCTTTCCGCCGCG CTCCGGGCCTTTGAGTCGCTCCCCTTCTCCCCCGCATCCGCCCCCGACCCTCTCTCCGCC GCTGCCTATGCCGCGCTCGTCGCGGCCTGCTCCCGCCTCCGCTCCTTCCCGCAGGGGCGC CTCGTCCATCGTCACCTCCTTGCCTCCTCTGCTGGCGCCGCATACCTCGCTCGCAACACC ATTCTCAGCAACCACCTCATCACCATGTACGGCCGCTGCGCCGCCCCAGATTCCGCACGC ATGGTGTTCGACGGGATGCTCGACAGGAACCCCGTCTCCTGGGCCGCCGTTATCGCGGCG CATGCGCAGAACAGCCGTTGTGCCGATGCCATGGGTCTCTTCTCCTCCATGTTGCGGTTG GGGACCGCGCCGGACGAGTTTGCGCTCGGCAGCGCCGTGCGCGCCTGCGCGGAGCTTGGG GACTTGGGCCTAGGGAGGCAGGTGCATGCGCAGGCCATAAAATCGGATAACGGAGGTCAT CTGATCGTGCAGAACGCACTCGTCACCATGTACTCCAAGAGCGGTTCAGTTGGGGATGGA TTTGCGCTCTTTGAGAGGATTAGGGACAAAGATTTATTTTCATGGGGGTCAATTATCGCC GGGCTTGCACAGCAAGGTCGTGAAATGGACGCACTTCACATTTTCAGGGAGATGATTGCT GAGGGCATGCACCACCCCAATGAGTTCCATTTTGGGAGTGTCTTTAGGGCCTGCTCAGTT GTTATTAACAGTTTGGAGTACGGGGAGCAGATTCACGGTTTATGTGTCAAGTATAAGCTG GACCGCAATTCATACGCAGGTTGCTCGCTGGGTGACATGTATGCCCGTTGCAATAAGCTT GACTCAGCAATGAAGGTGTTTTACAGAATTGAGTCACCTGATTTGGTTTCTTGGAATTCC TTAATAAATGCTTTCTCTGCTGATGGGCTCCTTAGTGAGGCTATGGTTCTGTTCTCTGAG ATGAGATATTCTAGTCTGAAGCCTGATGGTATCACGGTTATGGCTTTGTTATGTGCGTGT GTTGGCTGTGATGCTTTGCGTCAAGGTAGATCCATCCACTCGTACTTGGTCAAATTAGGT TTAGGCGGGGATGTTATGGTATGCAATTCTTTAATCAGCATGTATACAAGGTGTTTGGAT TTCCCCTCTGCAATGGATGTCTTTCACGAGACAAATGATCGTGATGTTGTCACCTGGAAC AGCATTCTCACTGCTTGTGTGCAGCACCGGCATATGGAAGATGTATTTAAGTTATTCAGA CTCTTGCACAGTTCAATGCCAAGTCTGGATAGGATCAGTCTAAACAATGTTTTGAGTGCT TCTGCTGAGCTGGGTTACTTTGAAATGGCGAAACAGGTTCATGCATATGCCTTCAAGGTT GGACTGGTGAGTGATGCAATTCTGAGTAATGCTCTGATTGACACTTATGCTAAATGTGGA AGTTTAGATGATGCCAACAAGCTCTTTGAAATAATGGGCACCGGCCGCGATGTGTTCTCT TGGAGCAGCTTGATTGTTGGCTATGCCCAATTTGGTTATGCAAAGGAAGCACTTGATTTA TTTGCCAGGATGAGAAACCTTGGAGTCAAGCCAAATCATGTAACCTTTGTCGGTGTCCTC ATAGCATGCAGTCGTGTAGGACTTGTTGATGAAGGCTGCTATTACTACAGTATTATGGAA CCTGAATATGGCATTGTCCCAACGAAAGAGCATTGCTCATGTGTCATTGATTTGTTGGCA CGTGCTGGGAGACTAAGTGAGGCAGCAAAATTTGTTGACCAAATGCCATTTGAACCTGAT ATTATAATGTGGAATACTCTGCTAGCCGCTAGCAGAACACATAATGATGTTGAGATGGGG AAGAGGGCAGCAGAAGGTGTTTTAAATATTGATCCTTCTCATTCAGCAGCCTATGTCCTT TTGTGCAACATATATGCCTCATCTGGCAATTGGAATGAGTTTGCAAGATTGAAGAAGGAT ATGAGAAGCAGCGGAGTCCAGAAATCACCTGGGAAGAGTTGGATTAAACTCAAGGGCGAG CTGAAAGTCTTTATTGTAGAGGACAGATCGCACCCAGAGTCTGATGAAATGTACACAATG CTGGATCTGATTGGATTTGAAATGGTAAAAGCGGGTTATATTCCAGAACTTTCATGTTAC TCACGTAAATATATTAGTTCTGACCACACATATTATGATTTGCTGAGTGAAGAAATGTTG GCTGAATATGGAGTCAGTTCTCAATAG

Peptide Sequence

PEP ID	Zm00001d025870_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:132102174:132108037:-1 gene:Zm00001d025870 transcript:Zm00001d025870_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat family protein
Sequence	MQNPSGTILQFYHSGRLSAALRAFESLPFSPASAPDPLSAAAYAALVAACSRLRSFPQGR LVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAA HAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGH LIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIA EGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKL DSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCAC VGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWN SILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKV GLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDL FARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLA RAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVL LCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEMYTM LDLIGFEMVKAGYIPELSCYSRKYISSDHTYYDLLSEEMLAEYGVSSQ

Transcript Sequence

Transcript ID	Zm00001d025870_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:132102174:132108037:-1 gene:Zm00001d025870 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat family protein
Sequence	ATGCAGAATCCAAGCGGCACCATCCTTCAGTTCTACCACTCGGGACGGCTTTCCGCCGCG CTCCGGGCCTTTGAGTCGCTCCCCTTCTCCCCCGCATCCGCCCCCGACCCTCTCTCCGCC GCTGCCTATGCCGCGCTCGTCGCGGCCTGCTCCCGCCTCCGCTCCTTCCCGCAGGGGCGC CTCGTCCATCGTCACCTCCTTGCCTCCTCTGCTGGCGCCGCATACCTCGCTCGCAACACC ATTCTCAGCAACCACCTCATCACCATGTACGGCCGCTGCGCCGCCCCAGATTCCGCACGC ATGGTGTTCGACGGGATGCTCGACAGGAACCCCGTCTCCTGGGCCGCCGTTATCGCGGCG CATGCGCAGAACAGCCGTTGTGCCGATGCCATGGGTCTCTTCTCCTCCATGTTGCGGTTG GGGACCGCGCCGGACGAGTTTGCGCTCGGCAGCGCCGTGCGCGCCTGCGCGGAGCTTGGG GACTTGGGCCTAGGGAGGCAGGTGCATGCGCAGGCCATAAAATCGGATAACGGAGGTCAT CTGATCGTGCAGAACGCACTCGTCACCATGTACTCCAAGAGCGGTTCAGTTGGGGATGGA TTTGCGCTCTTTGAGAGGATTAGGGACAAAGATTTATTTTCATGGGGGTCAATTATCGCC GGGCTTGCACAGCAAGGTCGTGAAATGGACGCACTTCACATTTTCAGGGAGATGATTGCT GAGGGCATGCACCACCCCAATGAGTTCCATTTTGGGAGTGTCTTTAGGGCCTGCTCAGTT GTTATTAACAGTTTGGAGTACGGGGAGCAGATTCACGGTTTATGTGTCAAGTATAAGCTG GACCGCAATTCATACGCAGGTTGCTCGCTGGGTGACATGTATGCCCGTTGCAATAAGCTT GACTCAGCAATGAAGGTGTTTTACAGAATTGAGTCACCTGATTTGGTTTCTTGGAATTCC TTAATAAATGCTTTCTCTGCTGATGGGCTCCTTAGTGAGGCTATGGTTCTGTTCTCTGAG ATGAGATATTCTAGTCTGAAGCCTGATGGTATCACGGTTATGGCTTTGTTATGTGCGTGT GTTGGCTGTGATGCTTTGCGTCAAGGTAGATCCATCCACTCGTACTTGGTCAAATTAGGT TTAGGCGGGGATGTTATGGTATGCAATTCTTTAATCAGCATGTATACAAGGTGTTTGGAT TTCCCCTCTGCAATGGATGTCTTTCACGAGACAAATGATCGTGATGTTGTCACCTGGAAC AGCATTCTCACTGCTTGTGTGCAGCACCGGCATATGGAAGATGTATTTAAGTTATTCAGA CTCTTGCACAGTTCAATGCCAAGTCTGGATAGGATCAGTCTAAACAATGTTTTGAGTGCT TCTGCTGAGCTGGGTTACTTTGAAATGGCGAAACAGGTTCATGCATATGCCTTCAAGGTT GGACTGGTGAGTGATGCAATTCTGAGTAATGCTCTGATTGACACTTATGCTAAATGTGGA AGTTTAGATGATGCCAACAAGCTCTTTGAAATAATGGGCACCGGCCGCGATGTGTTCTCT TGGAGCAGCTTGATTGTTGGCTATGCCCAATTTGGTTATGCAAAGGAAGCACTTGATTTA TTTGCCAGGATGAGAAACCTTGGAGTCAAGCCAAATCATGTAACCTTTGTCGGTGTCCTC ATAGCATGCAGTCGTGTAGGACTTGTTGATGAAGGCTGCTATTACTACAGTATTATGGAA CCTGAATATGGCATTGTCCCAACGAAAGAGCATTGCTCATGTGTCATTGATTTGTTGGCA CGTGCTGGGAGACTAAGTGAGGCAGCAAAATTTGTTGACCAAATGCCATTTGAACCTGAT ATTATAATGTGGAATACTCTGCTAGCCGCTAGCAGAACACATAATGATGTTGAGATGGGG AAGAGGGCAGCAGAAGGTGTTTTAAATATTGATCCTTCTCATTCAGCAGCCTATGTCCTT TTGTGCAACATATATGCCTCATCTGGCAATTGGAATGAGTTTGCAAGATTGAAGAAGGAT ATGAGAAGCAGCGGAGTCCAGAAATCACCTGGGAAGAGTTGGATTAAACTCAAGGGCGAG CTGAAAGTCTTTATTGTAGAGGACAGATCGCACCCAGAGTCTGATGAAATGTACACAATG CTGGATCTGATTGGATTTGAAATGGTAAAAGCGGGTTATATTCCAGAACTTTCATGTTAC TCACGTAAATATATTAGTTCTGACCACACATATTATGATTTGCTGAGTGAAGAAATGTTG GCTGAATATGGAGTCAGTTCTCAATAGTCATTGCTGACTTCCTATCTTTTACCATGTCAC AAGATTTTTTGCCAATTGTCAAAGGAAATCAAGGTTCACTATCTCGATAAGGATACAATT TGGCCAACACAGGTGGTGGCAATGGCGAGGCCAGAAAGGATGGACCCAAGCAGATTTAGC TTGAGATCAGTAACTGAAGCAATTCCTACTCCAAGAAGTAAGACCAGAAGAGAAAGCTTG ATACTCTCGCTGCACATCATTGAATTGGTATTAGCTCAGTGGAAATAGCAGTTAATATCA CAGGGACCATTTAGGCCCAGAAAGT