Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d025837_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:10:131419324:131425149:-1 gene:Zm00001d025837 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RING zinc finger domain superfamily protein
Sequence	ATGACTGACATGAATTCTGATGAGATTCTTGAGGTTCCTGACACTCCTGACCGATTACAG CAGTCAAAATACCATGTTTCCAGCTCTATTGTTGGGAGGGATGGTACAATGGCAGCTGCT AATCCATCACCACAGCGCAAATTTAGAATTAGATTCAAGAACAATTCCGTGCAAGGTTCA TCAAGTCAAAATAATGGTTGTAGCATACTGCCTGCAGCTTTAGATACTGATCATATTTTC AAACAAGCTGAAGCAGCACAGATTCTGGAACTGTCTAAAGACTATAAGGCAAAATTTTCC CTACAGAAACCTGACAGCACAAGGATATCTGTTGACAGTGAAAAGAGGGCTGGAAAACAT GGCTTTGATCAGAGCAGAAGCATTTCGAACAATATAAGTTGTAGTGTGACTGGAGGAAGG AACCCTACCTTCCAAGTTAAAGATGGAGAGGTTGGTCAGCAAGATGCAGGTCATCAGAGT GCAAACTTTCTAGACATAGGACCAGGTTTTCCTACTATTCAAGTGGGAAAACCAGGATAC AGATTATGCACTCGCACTACTGATAAGCTGAAAGGTGTAACAGGTGCTGATGTTTGTCCA GGATCAAGTTCTGGGGAGGTCAAAGGGGACTTGATCACTAACAAGGTCATTGCAGGACCT ACAAGCCCTCTGCGTGTTTTTCCTCGAAGGCATGTGGGCCAAAAAAGGCTGGTACGCAAT GGATGTATTTCCCCCTCTAACATAGCCAAGACAGATGCAAAAGTTAATGAAAAACAGGAA ATGTGCTCTTTAAGTGAACATTTGGACCATCCGCATCAGCCTGATGCATTTGACGGAGGT GATGTGATTGACCTCACGGAGAATTCACCAATAATGACAAGGCAGAGATCTGAAGTGAAC AATAAATTGATGTCTGGACACAATATGGACACAAGGGCCGCAAAAAAGCTGAGAACAGAC AGATTTGGCAGGACTTTGGTTCGGCAGTCCAAATGTCATGCAAACAACAGCAGTTGTTCT GAAGTTAGCTTATCAGGCCTCAACAACAATGGAAAAGGAATTGACTGTGATATCTTGGAT AGTGATCAAACTGGAGAAGCTAATTTGAGGGGGGTTGATCTTAGTACTGCTGGAACTTAT CTAAACAAAAACTTTTCTGATATAAGCACGGAGCAAGGTTGGAGAACAACACACAACCAC ACAAGTAAATTACCCATTTCGTTTATGGGTAATATAACTAGCAGTTCCGGATGGGAATCT GGATCTTCTACCACACGATCTAATCAAAACCATGGATCTGCTGGAGGCAAGCATAGCTCT GTTAGTGGAGCAAACATAATAGTTCCTGATAAGATAGGGAATAAAACAATAATGCTTGGT AGAGAAAGGAGAAAACAAACCTCAACTTCTTCCCATATTGGTGAAAGCTCTAGTGCTGCT GACGAACCTAGAGGTGATCTTCAATCGTCAAAAATATCAGCTGGCCCAAATCATAGCAGT CATCAGCATAATATTCCTGTAATAAACATTGATGACGTATCCCCTGAAGCTAGACCTAGT TCGAGTGGATTCACTAATAGAACTCTTGATCCTACCATAGAAGCACAATTGGAGTCGGAT GAGTTATTGGCTCGCCAACTCCAGGAGCAGCTCTACAATGAATCTGCTCGTTTTGCCCCA ACAGAAGAGATTGATGCAATTGTAGCAATGTCACTTCAACATGAAGAAGATACTCATCGG ACATCTAGGACCTTAAGGAGGTTCCAAAACCATACTAGAGGTGCTCGGGCTACTCGTTTG AGTTCTTATCGAAATGCTCTTAGGGCTGAATTAGCAACAGCAAACAATATGATTTCCCGT CAGCGGAATACTGCTCCAATAAATTTGGGATTGAGAGCTGCTTTAGCAAGATATCCTGGT GCTTTGCACATTCAACCAAACATTGACTTAAATGACTATGATGCACTGCTTGCTCTGGAT GAAAATAACCACCAGCACACTGGTGCTTCAGAAAGCCAGATCAATAATTTGCCACAGTCA GTAGTTCAGTCCAATAGCATTGAAGATCCATGTTCTGTCTGCCTTGAAAATCCTTCTGTG GGAGATACTATCCGCCATTTGCCTTGCTTTCACAAGTTCCATAAAGAGTGTATTGACGAG TGGCTTAGGAGAAAGAAACTGTGCCCAGTCTGCAAGTTTGGGATTAACTGA

Peptide Sequence

PEP ID	Zm00001d025837_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:10:131419324:131425149:-1 gene:Zm00001d025837 transcript:Zm00001d025837_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RING zinc finger domain superfamily protein
Sequence	MTDMNSDEILEVPDTPDRLQQSKYHVSSSIVGRDGTMAAANPSPQRKFRIRFKNNSVQGS SSQNNGCSILPAALDTDHIFKQAEAAQILELSKDYKAKFSLQKPDSTRISVDSEKRAGKH GFDQSRSISNNISCSVTGGRNPTFQVKDGEVGQQDAGHQSANFLDIGPGFPTIQVGKPGY RLCTRTTDKLKGVTGADVCPGSSSGEVKGDLITNKVIAGPTSPLRVFPRRHVGQKRLVRN GCISPSNIAKTDAKVNEKQEMCSLSEHLDHPHQPDAFDGGDVIDLTENSPIMTRQRSEVN NKLMSGHNMDTRAAKKLRTDRFGRTLVRQSKCHANNSSCSEVSLSGLNNNGKGIDCDILD SDQTGEANLRGVDLSTAGTYLNKNFSDISTEQGWRTTHNHTSKLPISFMGNITSSSGWES GSSTTRSNQNHGSAGGKHSSVSGANIIVPDKIGNKTIMLGRERRKQTSTSSHIGESSSAA DEPRGDLQSSKISAGPNHSSHQHNIPVINIDDVSPEARPSSSGFTNRTLDPTIEAQLESD ELLARQLQEQLYNESARFAPTEEIDAIVAMSLQHEEDTHRTSRTLRRFQNHTRGARATRL SSYRNALRAELATANNMISRQRNTAPINLGLRAALARYPGALHIQPNIDLNDYDALLALD ENNHQHTGASESQINNLPQSVVQSNSIEDPCSVCLENPSVGDTIRHLPCFHKFHKECIDE WLRRKKLCPVCKFGIN

Transcript Sequence

Transcript ID	Zm00001d025837_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:10:131419324:131425149:-1 gene:Zm00001d025837 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RING zinc finger domain superfamily protein
Sequence	GTAACGTTTGACGCCAGAAACCGTCGTGTATCACACAGCCGGATTCACCCATAGGCCCAC CGATTCCCATATGGAGCCCACCAAAACCCAACCCATTACCTGATCCCAGGCGGCAGCGGA AACGCAAGGAGAGGGGCGGCGATGATACAGTAGATTTCAAACTCAAACTGACCACCAGAG AGAGATAGAGGGGAGAGATCGGAGAGGAAGGACGTTTGGAGCAGGCGGCTATTGCAGGCT TTGCAGCCGCCGTCCTCCTGATTCGGGCCCCCCTCCCCGGATCGCTCCAGATTCGCACGA TTTGGGGATCGTGCGTTTCGCCATCAGATCGGGAGAAGAAAAATCAAGGTGAAGGGGCAA GTTTCTGCAACTTAAATAAATAGAGTGAATATGACTGACATGAATTCTGATGAGATTCTT GAGGTTCCTGACACTCCTGACCGATTACAGCAGTCAAAATACCATGTTTCCAGCTCTATT GTTGGGAGGGATGGTACAATGGCAGCTGCTAATCCATCACCACAGCGCAAATTTAGAATT AGATTCAAGAACAATTCCGTGCAAGGTTCATCAAGTCAAAATAATGGTTGTAGCATACTG CCTGCAGCTTTAGATACTGATCATATTTTCAAACAAGCTGAAGCAGCACAGATTCTGGAA CTGTCTAAAGACTATAAGGCAAAATTTTCCCTACAGAAACCTGACAGCACAAGGATATCT GTTGACAGTGAAAAGAGGGCTGGAAAACATGGCTTTGATCAGAGCAGAAGCATTTCGAAC AATATAAGTTGTAGTGTGACTGGAGGAAGGAACCCTACCTTCCAAGTTAAAGATGGAGAG GTTGGTCAGCAAGATGCAGGTCATCAGAGTGCAAACTTTCTAGACATAGGACCAGGTTTT CCTACTATTCAAGTGGGAAAACCAGGATACAGATTATGCACTCGCACTACTGATAAGCTG AAAGGTGTAACAGGTGCTGATGTTTGTCCAGGATCAAGTTCTGGGGAGGTCAAAGGGGAC TTGATCACTAACAAGGTCATTGCAGGACCTACAAGCCCTCTGCGTGTTTTTCCTCGAAGG CATGTGGGCCAAAAAAGGCTGGTACGCAATGGATGTATTTCCCCCTCTAACATAGCCAAG ACAGATGCAAAAGTTAATGAAAAACAGGAAATGTGCTCTTTAAGTGAACATTTGGACCAT CCGCATCAGCCTGATGCATTTGACGGAGGTGATGTGATTGACCTCACGGAGAATTCACCA ATAATGACAAGGCAGAGATCTGAAGTGAACAATAAATTGATGTCTGGACACAATATGGAC ACAAGGGCCGCAAAAAAGCTGAGAACAGACAGATTTGGCAGGACTTTGGTTCGGCAGTCC AAATGTCATGCAAACAACAGCAGTTGTTCTGAAGTTAGCTTATCAGGCCTCAACAACAAT GGAAAAGGAATTGACTGTGATATCTTGGATAGTGATCAAACTGGAGAAGCTAATTTGAGG GGGGTTGATCTTAGTACTGCTGGAACTTATCTAAACAAAAACTTTTCTGATATAAGCACG GAGCAAGGTTGGAGAACAACACACAACCACACAAGTAAATTACCCATTTCGTTTATGGGT AATATAACTAGCAGTTCCGGATGGGAATCTGGATCTTCTACCACACGATCTAATCAAAAC CATGGATCTGCTGGAGGCAAGCATAGCTCTGTTAGTGGAGCAAACATAATAGTTCCTGAT AAGATAGGGAATAAAACAATAATGCTTGGTAGAGAAAGGAGAAAACAAACCTCAACTTCT TCCCATATTGGTGAAAGCTCTAGTGCTGCTGACGAACCTAGAGGTGATCTTCAATCGTCA AAAATATCAGCTGGCCCAAATCATAGCAGTCATCAGCATAATATTCCTGTAATAAACATT GATGACGTATCCCCTGAAGCTAGACCTAGTTCGAGTGGATTCACTAATAGAACTCTTGAT CCTACCATAGAAGCACAATTGGAGTCGGATGAGTTATTGGCTCGCCAACTCCAGGAGCAG CTCTACAATGAATCTGCTCGTTTTGCCCCAACAGAAGAGATTGATGCAATTGTAGCAATG TCACTTCAACATGAAGAAGATACTCATCGGACATCTAGGACCTTAAGGAGGTTCCAAAAC CATACTAGAGGTGCTCGGGCTACTCGTTTGAGTTCTTATCGAAATGCTCTTAGGGCTGAA TTAGCAACAGCAAACAATATGATTTCCCGTCAGCGGAATACTGCTCCAATAAATTTGGGA TTGAGAGCTGCTTTAGCAAGATATCCTGGTGCTTTGCACATTCAACCAAACATTGACTTA AATGACTATGATGCACTGCTTGCTCTGGATGAAAATAACCACCAGCACACTGGTGCTTCA GAAAGCCAGATCAATAATTTGCCACAGTCAGTAGTTCAGTCCAATAGCATTGAAGATCCA TGTTCTGTCTGCCTTGAAAATCCTTCTGTGGGAGATACTATCCGCCATTTGCCTTGCTTT CACAAGTTCCATAAAGAGTGTATTGACGAGTGGCTTAGGAGAAAGAAACTGTGCCCAGTC TGCAAGTTTGGGATTAACTGAAGTTTGCCGTACCAGTCTACAGTGGAGTTCTACTTGGTA GTGGCAGCGACGAGGTGCTGCAATTTCTCATACGGGATGCTTTCCTGCAAAGATTTTTTT TTGTCTAAGATAAAAAAACAATGTATTGCTGTGATCTGCGCTTTTGGGCATCATTTTGTA TGCACGCACGTTTTGCTTGCTATTTTTGTTGTCGTGATCCACCAATTCCCATGAATTGGT TACCAGCATCTTGTCAATCATTTATGTCGCCGCATATATGATCCATCAATTGGC